Remove MATLAB leftovers

Author: dweindl

doc/.gitignore

@@ -1,8 +1,6 @@
 _build/
 _doxyoutput_amici_cpp/
-_doxyoutput_amici_matlab/
 _exhale_cpp_api/
-_exhale_matlab_api/
 examples/example_presimulation/model_presimulation/
 generated/
 build_doxygen/

doc/README.md

@@ -22,13 +22,12 @@ The documentation comprises:
 * Python API documentation of Python generated via SWIG (doxygen-style comments
   translated to docstrings by SWIG)
 * C++ API documentation (doxygen -> exhale -> breathe -> sphinx)
-* Matlab API documentation (mtocpp -> doxygen -> exhale -> breathe -> sphinx)
 
 ### Doxygen-only (legacy)
 
 (Parts of the) AMICI documentation can also be directly created using
 [doxygen](http://www.doxygen.nl/) directly. It combines Markdown files from
-`doc/` and in-source documentation from the C++ and Matlab source files.
+`doc/` and in-source documentation from the C++ source files.
 
 The documentation is generated by running
 
@@ -40,15 +39,8 @@ The resulting HTML and PDF documentation will be created in
 
 #### Doxygen configuration
 
-The main doxygen configuration file is located in
-`matlab/mtoc/config/Doxyfile.template`. Edit this file for inclusion or
-exclusion of additional files.
-
-#### Matlab documentation
-
-Matlab documentation is processed by
-[mtoc++](https://www.morepas.org/software/mtocpp/docs/tools.html).
-This is configured in `matlab/mtoc/config`.
+The main doxygen configuration file is located in `doc/Doxyfile.template`.
+Edit this file for inclusion or exclusion of additional files.
 
 ## Writing documentation
 
@@ -62,13 +54,13 @@ Graphics for documentation are kept in `doc/gfx/`.
 ### When using Markdown
 
 * Note that there are some incompatibilities of GitHub Markdown and Doxygen
-  Markdown. Ideally documentation should be written in a format compatible with
+  Markdown. Ideally, documentation should be written in a format compatible with
   both.
-  This affects for example images links which currently cause trouble in
+  This affects, for example, image links which currently cause trouble in
   Doxygen.
 
 * Where possible, relative links are preferred over absolute links. However,
-  they should work with both Github and Doxygen and ideally with local files
+  they should work with both GitHub and Doxygen and ideally with local files
   for offline use.
 
 * Please stick to the limit of 80 characters per line for readability of raw

python/tests/test_pregenerated_models.py

@@ -1,6 +1,6 @@
 #!/usr/bin/env python3
 
-"""Run simulations with Matlab-AMICI pre-generated models and verify using
+"""Run simulations with pre-generated models and verify using
 saved expectations."""
 
 import os