[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot] · pre-commit-ci[bot] · commit f5a5ad7a6afb · 2025-08-11T18:43:18.000Z
for more information, see https://pre-commit.ci
diff --git a/development/testing/regression.py b/development/testing/regression.py
@@ -1,4 +1,5 @@
 """Create, run or investigate regression checks."""
+
 import pickle
 import socket
 
diff --git a/development/testing/testing_pull_request.py b/development/testing/testing_pull_request.py
@@ -1,4 +1,5 @@
 """Run a series of tests that are required for any pull request to be merged."""
+
 import socket
 
 import click
diff --git a/docs/projects/_numerical_integration.py b/docs/projects/_numerical_integration.py
@@ -1,4 +1,5 @@
 """Auxiliary and plotting functions for the respy tutorial numerical integration."""
+
 import matplotlib.pyplot as plt
 from matplotlib import ticker
 
diff --git a/respy/__init__.py b/respy/__init__.py
@@ -9,6 +9,7 @@
     rp.<func>
 
 """
+
 import pytest
 
 from respy.config import ROOT_DIR
diff --git a/respy/_numba.py b/respy/_numba.py
@@ -1,4 +1,5 @@
 """Special functions for using numba."""
+
 import warnings
 
 import numba as nb
diff --git a/respy/conditional_draws.py b/respy/conditional_draws.py
@@ -1,4 +1,5 @@
 """Everything related to conditional draws for the maximum likelihood estimation."""
+
 import numpy as np
 from estimagic.utilities import robust_cholesky
 from numba import guvectorize
diff --git a/respy/config.py b/respy/config.py
@@ -1,4 +1,5 @@
 """General configuration for respy."""
+
 from pathlib import Path
 
 import numpy as np
diff --git a/respy/conftest.py b/respy/conftest.py
@@ -1,4 +1,5 @@
 """This module includes code to configure pytest."""
+
 import os
 
 import numpy as np
diff --git a/respy/data.py b/respy/data.py
@@ -1,4 +1,5 @@
 """Everything related to the original data from Keane and Wolpin (1997)."""
+
 import numpy as np
 import pandas as pd
 
diff --git a/respy/exogenous_processes.py b/respy/exogenous_processes.py
@@ -1,4 +1,5 @@
 """Utils for the inclusion of exogenous processes."""
+
 import functools
 
 import numpy as np
diff --git a/respy/interface.py b/respy/interface.py
@@ -1,4 +1,5 @@
 """General interface functions for respy."""
+
 import warnings
 
 import pandas as pd
diff --git a/respy/interpolate.py b/respy/interpolate.py
@@ -1,4 +1,5 @@
 """This module contains the code for approximate solutions to the DCDP."""
+
 import warnings
 
 import numba as nb
diff --git a/respy/likelihood.py b/respy/likelihood.py
@@ -1,4 +1,5 @@
 """Everything related to the estimation with maximum likelihood."""
+
 import warnings
 from functools import partial
 
diff --git a/respy/method_of_simulated_moments.py b/respy/method_of_simulated_moments.py
@@ -15,6 +15,7 @@
        of Asset Prices. Econometrica, 61(4), 929-952.
 
 """
+
 import copy
 import functools
 
diff --git a/respy/parallelization.py b/respy/parallelization.py
@@ -1,4 +1,5 @@
 """This module contains the code to control parallel execution."""
+
 import functools
 
 import joblib
diff --git a/respy/pre_processing/data_checking.py b/respy/pre_processing/data_checking.py
@@ -1,4 +1,5 @@
 """Test functions to ensure the validity of data."""
+
 import numpy as np
 
 from respy.shared import generate_column_dtype_dict_for_estimation
diff --git a/respy/pre_processing/model_checking.py b/respy/pre_processing/model_checking.py
@@ -1,4 +1,5 @@
 """Everything related to validate the model."""
+
 import numba as nb
 import numpy as np
 
diff --git a/respy/pre_processing/model_processing.py b/respy/pre_processing/model_processing.py
@@ -1,4 +1,5 @@
 """Process model specification files or objects."""
+
 import copy
 import itertools
 import os
@@ -802,9 +803,9 @@ def _convert_labels_in_formulas_to_codes(options, optim_paras):
 
     for choice in optim_paras["choices"]:
         for i, formula in enumerate(options["negative_choice_set"].get(choice, [])):
-            options["negative_choice_set"][choice][
-                i
-            ] = _replace_choices_and_observables_in_formula(formula, optim_paras)
+            options["negative_choice_set"][choice][i] = (
+                _replace_choices_and_observables_in_formula(formula, optim_paras)
+            )
 
     return options
 
diff --git a/respy/pre_processing/process_covariates.py b/respy/pre_processing/process_covariates.py
@@ -1,4 +1,5 @@
 """This module comprises all functions which process the definition of covariates."""
+
 import copy
 
 
diff --git a/respy/shared.py b/respy/shared.py
@@ -4,6 +4,7 @@
 import from respy itself. This is to prevent circular imports.
 
 """
+
 import shutil
 
 import numba as nb
diff --git a/respy/simulate.py b/respy/simulate.py
@@ -1,4 +1,5 @@
 """Everything related to the simulation of data with structural models."""
+
 import functools
 import warnings
 
diff --git a/respy/solve.py b/respy/solve.py
@@ -1,4 +1,5 @@
 """Everything related to the solution of a structural model."""
+
 import functools
 
 import numpy as np
diff --git a/respy/state_space.py b/respy/state_space.py
@@ -1,4 +1,5 @@
 """Everything related to the state space of a structural model."""
+
 import itertools
 
 import numba as nb
diff --git a/respy/tests/random_model.py b/respy/tests/random_model.py
@@ -1,4 +1,5 @@
 """This module contains the functions for the generation of random requests."""
+
 import collections
 import copy
 
diff --git a/respy/tests/test_flexible_choices.py b/respy/tests/test_flexible_choices.py
@@ -1,4 +1,5 @@
 """Contains code for testing for flexible choices."""
+
 import pandas as pd
 import pytest
 
diff --git a/respy/tests/test_method_of_simulated_moments.py b/respy/tests/test_method_of_simulated_moments.py
@@ -1,4 +1,5 @@
 """Test the msm interface of respy."""
+
 import copy
 
 import numpy as np
diff --git a/respy/tests/test_model_processing.py b/respy/tests/test_model_processing.py
@@ -1,4 +1,5 @@
 """Test model generation."""
+
 import io
 import textwrap
 
diff --git a/respy/tests/test_randomness.py b/respy/tests/test_randomness.py
@@ -1,4 +1,5 @@
 """This module includes test to specifically test that randomness is held constant."""
+
 import numpy as np
 import pytest
 
diff --git a/respy/tests/test_regression.py b/respy/tests/test_regression.py
@@ -1,4 +1,5 @@
 """Run a few regression tests."""
+
 import pickle
 
 import numpy as np
diff --git a/respy/tests/test_replication_kw_94.py b/respy/tests/test_replication_kw_94.py
@@ -23,6 +23,7 @@
        181.
 
 """
+
 import numpy as np
 import pandas as pd
 import pytest
diff --git a/respy/tests/test_simulate.py b/respy/tests/test_simulate.py
@@ -1,4 +1,5 @@
 """Test the simulation routine."""
+
 import numpy as np
 import pandas as pd
 import pytest
diff --git a/setup.py b/setup.py
@@ -1,4 +1,5 @@
 """The general package information for respy."""
+
 from pathlib import Path
 
 from setuptools import find_packages

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""Create, run or investigate regression checks."""`
	`2`	`+`
`2`	`3`	`import pickle`
`3`	`4`	`import socket`
`4`	`5`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""Run a series of tests that are required for any pull request to be merged."""`
	`2`	`+`
`2`	`3`	`import socket`
`3`	`4`
`4`	`5`	`import click`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""Auxiliary and plotting functions for the respy tutorial numerical integration."""`
	`2`	`+`
`2`	`3`	`import matplotlib.pyplot as plt`
`3`	`4`	`from matplotlib import ticker`
`4`	`5`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""Special functions for using numba."""`
	`2`	`+`
`2`	`3`	`import warnings`
`3`	`4`
`4`	`5`	`import numba as nb`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""Everything related to conditional draws for the maximum likelihood estimation."""`
	`2`	`+`
`2`	`3`	`import numpy as np`
`3`	`4`	`from estimagic.utilities import robust_cholesky`
`4`	`5`	`from numba import guvectorize`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""General configuration for respy."""`
	`2`	`+`
`2`	`3`	`from pathlib import Path`
`3`	`4`
`4`	`5`	`import numpy as np`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""This module includes code to configure pytest."""`
	`2`	`+`
`2`	`3`	`import os`
`3`	`4`
`4`	`5`	`import numpy as np`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""Everything related to the original data from Keane and Wolpin (1997)."""`
	`2`	`+`
`2`	`3`	`import numpy as np`
`3`	`4`	`import pandas as pd`
`4`	`5`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,5 @@`
`1`	`1`	`"""Utils for the inclusion of exogenous processes."""`
	`2`	`+`
`2`	`3`	`import functools`
`3`	`4`
`4`	`5`	`import numpy as np`