Review helm charts

* Review images for MTM, MWM and Gateway, so that we use the ones from
the Monai project
* Add orthanc and argo-workflows helm charts, so that we can setup
a complete example
* Add a README with a guide on how to set it up
* Review values in the yaml file: namespaces, hostnames,
authorization,... so that this works as explained in the README

Happy hacking

Signed-off-by: Jordi Massaguer Pla <[email protected]>

Author: jordimassaguerpla

deploy/helm/Gateway-local.yaml

@@ -14,9 +14,16 @@
 replicaCount: 1
 
 image:
-  repository: registry.gitlab.com/answerdigital/londonai/aide/workflow-manager-images/infomatics-gateway
+  repository: ghcr.io/project-monai/monai-deploy-informatics-gateway
   pullPolicy: IfNotPresent
-  tag: 2022-08-01
+  tag: latest
+  #  command:
+  #  - "bin/sh"
+  #  - "-ce"
+  #  - "mig-cli config init"
+
+# mig-cli config endpoint http://localhost:5000
+
 
 enviromentVariables:
   InformaticsGateway__messaging__publisherSettings__endpoint: "rabbitmq-monai"
@@ -25,10 +32,16 @@ enviromentVariables:
   InformaticsGateway__messaging__subscriberSettings__endpoint: "rabbitmq-monai"
   InformaticsGateway__messaging__subscriberSettings__username: "admin"
   InformaticsGateway__messaging__subscriberSettings__password: "admin"
-  InformaticsGateway__storage__settings__endpoint: "minio.monai:9000" 
-  InformaticsGateway__storage__settings__accessKey: "admin"
-  InformaticsGateway__storage__settings__accessToken: "password"
+  InformaticsGateway__storage__settings__endpoint: "minio-monai:9000" 
+  InformaticsGateway__storage__settings__accessKey: "minioadmin"
+  InformaticsGateway__storage__settings__accessToken: "minioadmin"
   InformaticsGateway__dicom__scp__rejectUnknownSources: false
+  ConnectionStrings__InformaticsGatewayDatabase: "Data Source=/mig.db"
+  InformaticsGateway__storage__localTemporaryStoragePath: "/payloads"
+  InformaticsGateway__dicom__scu__aeTitle: "MONAISCU"
+  # Kestrel__EndPoints__Http__Url: "http://::5000"
+  MonaiDeployAuthentication__bypassAuthentication: true
+
 
 
 service:

deploy/helm/Gateway.yaml

@@ -14,9 +14,9 @@
 replicaCount: 1
 
 image:
-  repository: registry.gitlab.com/answerdigital/londonai/aide/workflow-manager-images/infomatics-gateway
+  repository: ghcr.io/project-monai/monai-deploy-informatics-gateway
   pullPolicy: IfNotPresent
-  tag: 2022-08-30-01
+  tag: latest
 
 imagePullSecrets:
  - name: gitlab-image-pull

deploy/helm/MTM.yaml

@@ -11,28 +11,35 @@
 # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 # See the License for the specific language governing permissions and
 # limitations under the License.
-      
+
 replicaCount: 1
 
 image:
-  repository: registry.gitlab.com/answerdigital/londonai/aide/workflow-manager-images/task-manager
+  repository: ghcr.io/project-monai/monai-deploy-task-manager
   pullPolicy: IfNotPresent
-  tag: 2022-09-05-01
-
-imagePullSecrets:
- - name: gitlab-image-pull
+  tag: develop-latest
 
 enviromentVariables:
-  WorkflowManager__storage__settings__endpoint: "minio.monai:9000"
-  WorkflowManager__storage__settings__accessKey: "rootminio"
-  WorkflowManager__storage__settings__accessToken: "rootminio"
+  ASPNETCORE_ENVIRONMENT: "local"
+  DOTNET_ENVIRONMENT: "local"
+  WorkloadManagerDatabase__ConnectionString: "mongodb://root:rootpassword@mongo-monai:27017"
+  WorkflowManager__TaskManager__argoPluginArguments__server_url: "http://argo-workflows-server:2746"
+  WorflowManager__messaging__retryDelays: "localhost"
+  WorkflowManager__storage__settings__endpoint: "minio-monai:9000"
+  WorkflowManager__storage__settings__accessKey: "minioadmin"
+  WorkflowManager__storage__settings__accessToken: "minioadmin"
   WorkflowManager__storage__settings__executableLocation: "mc"
-  WorkflowManager__messaging__publisherSettings__endpoint: "rabbit-monai.argo"
+  WorkflowManager__storage__settings__bucket: "bucket1"
+  # WorkflowManager__storage__settings__region: "eu-west-2"
+  # WorkflowManager__storage__settings__securedConnection: "false"
+  # WorkflowManager__storage__settings__serviceName: "test"
+  WorkflowManager__messaging__publisherSettings__endpoint: "rabbitmq-monai"
   WorkflowManager__messaging__publisherSettings__port: "5672"  
-  WorkflowManager__messaging__subscriberSettings__endpoint: "rabbit-monai.argo"
+  WorkflowManager__messaging__subscriberSettings__endpoint: "rabbitmq-monai"
   WorkflowManager__messaging__subscriberSettings__port: "5672"
   Serilog__WriteTo__0__Args__indexFormat: "index-monai{0:yyyy.MM}"
   Serilog__WriteTo__0__Args__nodeUris: "http://192.168.0.22:9200"
+  Kestrel__EndPoints__Http__Url: "http://::5000"
 
 enviromentVariablesFromSecrets:
   secrets:

deploy/helm/MWM.yaml

@@ -15,21 +15,20 @@
 replicaCount: 1
 
 image:
-  repository: registry.gitlab.com/answerdigital/londonai/aide/workflow-manager-images/workflow-manager
+  repository: ghcr.io/project-monai/monai-deploy-workflow-manager
   pullPolicy: IfNotPresent
-  tag: 2022-07-27-02
-
-imagePullSecrets:
- - name: gitlab-image-pull
+  tag: develop-latest
 
 enviromentVariables:
-  WorkflowManager__storage__settings__endpoint: "minio.monai:9000"
-  WorkflowManager__storage__settings__accessKey: "rootminio"
-  WorkflowManager__storage__settings__accessToken: "rootminio"
+  ASPNETCORE_ENVIRONMENT: "local"
+  DOTNET_ENVIRONMENT: "local"
+  WorkflowManager__storage__settings__endpoint: "minio-monai:9000"
+  WorkflowManager__storage__settings__accessKey: "minioadmin"
+  WorkflowManager__storage__settings__accessToken: "minioadmin"
   WorkflowManager__storage__settings__executableLocation: "mc"
-  WorkflowManager__messaging__publisherSettings__endpoint: "rabbitmq-monai.monai"
-  WorkflowManager__messaging__subscriberSettings__endpoint: "rabbitmq-monai.monai"
-  WorkloadManagerDatabase__ConnectionString: "mongodb://root:rootpassword@mongo-monai.monai:27017"
+  WorkflowManager__messaging__publisherSettings__endpoint: "rabbitmq-monai"
+  WorkflowManager__messaging__subscriberSettings__endpoint: "rabbitmq-monai"
+  WorkloadManagerDatabase__ConnectionString: "mongodb://root:rootpassword@mongo-monai:27017"
   Kestrel__EndPoints__Http__Url: "http://::5000"
 
 enviromentVariablesFromSecrets:
@@ -46,7 +45,7 @@ enviromentVariablesFromSecrets:
     - name: WorkflowManager__messaging__publisherSettings__password
       secretName: rabbit-secret-master
       secretKey: password
-      
+
 service:
   type: ClusterIP
   port: 5000