I think this is a very common issue many users face: Since q-s-m is used to test monadic code, it's possible that there is some interference between consecutive tests, or betweeen shrinking trials and proper cleaning up of resources is hard.
I faced this issue mainly on my rqlite tests https://github.com/advancedtelematic/quickcheck-state-machine/tree/rqlite, where I spawn new unix processes which listen on ports.
The solution I found there was to use the final Model returned from runCommands and do the cleaning up using this. For the parallel case, I extended the runParallelCommands, so that it also returns the final Environment and do the cleanup. It works, but if the re is an unexpected exception the cleanup won't happen. That's why I have disabled shrinking for now.
Another idea, is to get a cleanup function from the user and install handlers whenever suitable. Not sure how feasible this is and how big of a breaking change.