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|`apiClientId`| <notset> | Atlas API client ID for authentication. Required for running Atlas tools. |
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|`apiClientSecret`| <notset> | Atlas API client secret for authentication. Required for running Atlas tools. |
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|`connectionString`| <notset> | MongoDB connection string for direct database connections. Optional, if not set, you'll need to call the `connect` tool before interacting with MongoDB data. |
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|`loggers`| disk,mcp | Comma separated values, possible values are `mcp`, `disk` and `stderr`. See [Logger Options](#logger-options) for details. |
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|`logPath`| see note\*| Folder to store logs. |
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|`disabledTools`| <notset> | An array of tool names, operation types, and/or categories of tools that will be disabled. |
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|`readOnly`| false | When set to true, only allows read, connect, and metadata operation types, disabling create/update/delete operations. |
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|`indexCheck`| false | When set to true, enforces that query operations must use an index, rejecting queries that perform a collection scan. |
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|`telemetry`| enabled | When set to disabled, disables telemetry collection. |
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|`transport`| stdio | Either 'stdio' or 'http'. |
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|`httpPort`| 3000 | Port number. |
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|`httpHost`| 127.0.0.1 | Host to bind the http server. |
|`apiClientId`|`MDB_MCP_API_CLIENT_ID`|<notset> | Atlas API client ID for authentication. Required for running Atlas tools. |
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|`apiClientSecret`|`MDB_MCP_API_CLIENT_SECRET`|<notset> | Atlas API client secret for authentication. Required for running Atlas tools. |
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|`connectionString`|`MDB_MCP_CONNECTION_STRING`|<notset> | MongoDB connection string for direct database connections. Optional, if not set, you'll need to call the `connect` tool before interacting with MongoDB data. |
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|`loggers`|`MDB_MCP_LOGGERS`|disk,mcp | Comma separated values, possible values are `mcp`, `disk` and `stderr`. See [Logger Options](#logger-options) for details. |
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|`logPath`|`MDB_MCP_LOG_PATH`|see note\*| Folder to store logs. |
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|`disabledTools`|`MDB_MCP_DISABLED_TOOLS`|<notset> | An array of tool names, operation types, and/or categories of tools that will be disabled. |
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|`readOnly`|`MDB_MCP_READ_ONLY`|false | When set to true, only allows read, connect, and metadata operation types, disabling create/update/delete operations. |
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|`indexCheck`|`MDB_MCP_INDEX_CHECK`|false | When set to true, enforces that query operations must use an index, rejecting queries that perform a collection scan. |
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|`telemetry`|`MDB_MCP_TELEMETRY`|enabled | When set to disabled, disables telemetry collection. |
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|`transport`|`MDB_MCP_TRANSPORT`|stdio | Either 'stdio' or 'http'. |
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|`httpPort`|`MDB_MCP_HTTP_PORT`|3000 | Port number. |
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|`httpHost`|`MDB_MCP_HTTP_HOST`|127.0.0.1 | Host to bind the http server. |
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