diff --git a/libs/unity-py/CHANGELOG.md b/libs/unity-py/CHANGELOG.md index d289f5f3..b000bb8e 100644 --- a/libs/unity-py/CHANGELOG.md +++ b/libs/unity-py/CHANGELOG.md @@ -5,6 +5,21 @@ All notable changes to this project will be documented in this file. The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). +## [0.10.0] - 2025-03-31 + +### Added + +### Fixed + +### Changed +* feat: using UDS Lib to talk to DS services [#76](https://github.com/unity-sds/unity-monorepo/pull/76) + +### Removed + +### Security + +### Deprecated + ## [0.9.0] - 2025-02-19 ### Added diff --git a/libs/unity-py/poetry.lock b/libs/unity-py/poetry.lock index 19bc09f9..5aeb30c7 100644 --- a/libs/unity-py/poetry.lock +++ b/libs/unity-py/poetry.lock @@ -2,13 +2,13 @@ [[package]] name = "alabaster" -version = "0.7.13" -description = "A configurable sidebar-enabled Sphinx theme" +version = "0.7.16" +description = "A light, configurable Sphinx theme" optional = false -python-versions = ">=3.6" +python-versions = ">=3.9" files = [ - {file = "alabaster-0.7.13-py3-none-any.whl", hash = "sha256:1ee19aca801bbabb5ba3f5f258e4422dfa86f82f3e9cefb0859b283cdd7f62a3"}, - 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+python-versions = "^3.9" +content-hash = "2fe2e6ae2c42fc68441ee127b45ddfcd88cbbc430e5827a6ee618fae710d8586" diff --git a/libs/unity-py/pyproject.toml b/libs/unity-py/pyproject.toml index 33165d40..e1d84f5a 100644 --- a/libs/unity-py/pyproject.toml +++ b/libs/unity-py/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "unity-sds-client" -version = "0.9.0" +version = "0.10.0" description = "Unity-Py is a Python client to simplify interactions with NASA's Unity Platform." authors = ["Anil Natha, Mike Gangl"] @@ -19,14 +19,14 @@ enable = true [tool.poetry-monorepo.deps] [tool.poetry.dependencies] -python = "^3.8" +python = "^3.9" requests = "^2.28.0" tenacity = "^8.0.1" giturlparse = "^0.10.0" -pystac = "^1.7.3" unity-sps-ogc-processes-api-python-client ="^2.0.1" unity-sds-apgs-client = {path = "../app-package-build-client", develop = true} jsonschema = "^4.22.0" +mdps-ds-lib="1.1.1.dev500" [tool.poetry.dev-dependencies] diff --git a/libs/unity-py/tests/unity_sds_client/__init__.py b/libs/unity-py/tests/unity_sds_client/__init__.py new file mode 100644 index 00000000..e69de29b diff --git a/libs/unity-py/tests/unity_sds_client/services/__init__.py b/libs/unity-py/tests/unity_sds_client/services/__init__.py new file mode 100644 index 00000000..e69de29b diff --git a/libs/unity-py/tests/unity_sds_client/services/test_data_service.py b/libs/unity-py/tests/unity_sds_client/services/test_data_service.py new file mode 100644 index 00000000..ba8cf748 --- /dev/null +++ b/libs/unity-py/tests/unity_sds_client/services/test_data_service.py @@ -0,0 +1,95 @@ +import base64 + +from dotenv import load_dotenv +import os +from unittest import TestCase + +from unity_sds_client.services.data_service import DataService +from unity_sds_client.unity import _read_config +from unity_sds_client.unity_environments import UnityEnvironments +from unity_sds_client.unity_session import UnitySession +from unity_sds_client.resources.collection import Collection as UnityCollection + + +class TestDataService(TestCase): + + def setUp(self) -> None: + super().setUp() + load_dotenv() + os.environ['UNITY_USER'] = base64.standard_b64decode(os.environ.get('USERNAME').encode()).decode() + os.environ['UNITY_PASSWORD'] = base64.standard_b64decode(os.environ.get('PASSWORD').encode()).decode() + + def test_01(self): + config = _read_config([os.path.join('..', '..', '..', 'unity_sds_client', 'envs', 'environments.cfg')]) + session = UnitySession(UnityEnvironments.DEV.value, config) + client = DataService(session=session, endpoint=session.get_unity_href()) + result = client.get_collections(1) + print(result) + result = client.get_collections(1, True) + print(result) + return + + def test_02(self): + config = _read_config([os.path.join('..', '..', '..', 'unity_sds_client', 'envs', 'environments.cfg')]) + session = UnitySession(UnityEnvironments.DEV.value, config) + client = DataService(session=session, endpoint=session.get_unity_href()) + result = client.get_collection_data(UnityCollection('urn:nasa:unity:uds_local_test:DEV1:CHRP_16_DAY_REBIN___9'), 1) + print(result) + result = client.get_collection_data(UnityCollection('urn:nasa:unity:uds_local_test:DEV1:CHRP_16_DAY_REBIN___9'), 3, output_stac=True) + print(result) + return + + def test_03(self): + config = _read_config([os.path.join('..', '..', '..', 'unity_sds_client', 'envs', 'environments.cfg')]) + session = UnitySession(UnityEnvironments.DEV.value, config) + client = DataService(session=session, endpoint=session.get_unity_href()) + result = client.get_collection_data(UnityCollection('urn:nasa:unity:uds_local_test:DEV1:CHRP_16_DAY_REBIN___9'), 1, filter="status = 'completed'", output_stac=True) + print(result) + return + + def test_04(self): + config = _read_config([os.path.join('..', '..', '..', 'unity_sds_client', 'envs', 'environments.cfg')]) + session = UnitySession(UnityEnvironments.DEV.value, config) + client = DataService(session=session, endpoint=session.get_unity_href()) + client.urn = 'urn' + client.org = 'nasa' + client.project = 'unity' + client.tenant = 'uds_local_test' + client.tenant_venue = 'DEV1' + client.collection = 'CHRP_16_DAY_REBIN' + client.collection_venue = '9' + result = client.query_custom_properties() + print(result) + return + + def test_05(self): + config = _read_config([os.path.join('..', '..', '..', 'unity_sds_client', 'envs', 'environments.cfg')]) + session = UnitySession(UnityEnvironments.DEV.value, config) + client = DataService(session=session, endpoint=session.get_unity_href()) + client.urn = 'urn' + client.org = 'nasa' + client.project = 'unity' + client.tenant = 'uds_local_test' + client.tenant_venue = 'DEV1' + client.define_custom_metadata({ + 'tag': {'type': 'keyword'}, + 'c_version': {'type': 'float'}, + 'c_type': {'type': 'keyword'}, + }) + return + + def test_06(self): + config = _read_config([os.path.join('..', '..', '..', 'unity_sds_client', 'envs', 'environments.cfg')]) + session = UnitySession(UnityEnvironments.DEV.value, config) + client = DataService(session=session, endpoint=session.get_unity_href()) + result = client.create_collection(UnityCollection('urn:nasa:unity:uds_local_test:DEV1:WILLIAM_UNIT_TEST___2'), True) + print(result) + return + + def test_07(self): + config = _read_config([os.path.join('..', '..', '..', 'unity_sds_client', 'envs', 'environments.cfg')]) + session = UnitySession(UnityEnvironments.DEV.value, config) + client = DataService(session=session, endpoint=session.get_unity_href()) + result = client.delete_collection_item(UnityCollection('urn:nasa:unity:unity:dev:nga-unity-dev-output___3'), 'urn:nasa:unity:unity:dev:nga-unity-dev-output___3:output_1') + print(result) + return diff --git a/libs/unity-py/unity_sds_client/services/data_service.py b/libs/unity-py/unity_sds_client/services/data_service.py index 95aa91ae..fb1fbd2b 100644 --- a/libs/unity-py/unity_sds_client/services/data_service.py +++ b/libs/unity-py/unity_sds_client/services/data_service.py @@ -1,46 +1,66 @@ -import requests - +from mdps_ds_lib.ds_client.auth_token.token_abstract import TokenAbstract +from mdps_ds_lib.ds_client.ds_client_admin import DsClientAdmin +from mdps_ds_lib.ds_client.ds_client_user import DsClientUser +from pystac import Item, Collection +from unity_sds_client.resources.collection import Collection as UnityCollection +from unity_sds_client.resources.data_file import DataFile +from unity_sds_client.resources.dataset import Dataset from unity_sds_client.unity_exception import UnityException from unity_sds_client.unity_session import UnitySession -from unity_sds_client.resources.collection import Collection -from unity_sds_client.resources.dataset import Dataset -from unity_sds_client.resources.data_file import DataFile +import warnings + +class UnitySessionToken(TokenAbstract): + def __init__(self, unity_session: UnitySession) -> None: + super().__init__() + self.__unity_session = unity_session -class DataService(object): + def get_token(self): + return self.__unity_session.get_auth().get_token() + + +class DataService(DsClientUser, DsClientAdmin): """ The DataService class is a wrapper to the data endpoint(s) within Unity. This wrapper interfaces with the DAPA endpoints. The DataService class allows for the querying of data collections and data files within those collections. """ - def __init__( - self, - session: UnitySession, - endpoint: str = None, - ): - """Initialize the DataService class. - - Parameters - ---------- - session : UnitySession - Description of parameter `session`. - endpoint : str - The endpoint used to access the data service API. This is usually - shared across Unity Environments, but can be overridden. Defaults to - "None", and will be read from the configuration if not set. - - Returns - ------- - DataService - the Data Service object. - - """ - self._session = session - if endpoint is None: - self.endpoint = self._session.get_unity_href() + def __init__(self, session: UnitySession, endpoint: str = None, ds_stage: str = 'am-uds-dapa'): + endpoint = endpoint[:-1] if endpoint.endswith('/') else endpoint + super().__init__(UnitySessionToken(session), endpoint, ds_stage) + self.__session = session + self.urn, self.org, self.project = 'org', 'nasa', 'unity' + + # self.project, self.tenant, self.tenant_venue = self.__session.get_project(), self.__session.get_venue(), self.__session.get_venue_id() + + # @property + # def project(self): + # return self.__session.get_project() + # + # @property + # def tenant(self): + # return self.__session.get_venue() + # + # @property + # def tenant_venue(self): + # return self.__session.get_venue_id() + + def __update_setting(self, complete_collection_id: str): + split_id = complete_collection_id.split(':') + if len(split_id) != 6: + raise UnityException(f'invalid MDPS format: :::::') + + pure_collection_id = split_id[-1] + self.urn, self.org, self.project, self.tenant, self.tenant_venue = split_id[0], split_id[1], split_id[2], split_id[3], split_id[4] + if '___' in pure_collection_id: + self.collection, self.collection_venue = pure_collection_id.split('___') + else: + self.collection = pure_collection_id + return self def get_collections(self, limit=10, output_stac=False): + warnings.warn("get_collections is deprecated and will be removed in future versions. Use query_collections instead.", category=DeprecationWarning, stacklevel=2) """Returns a list of collections Returns @@ -49,149 +69,62 @@ def get_collections(self, limit=10, output_stac=False): List of returned collections """ - url = self.endpoint + "am-uds-dapa/collections" - token = self._session.get_auth().get_token() - response = requests.get(url, headers={"Authorization": "Bearer " + token}, params={"limit": limit}) - if output_stac: - return response.json() - - # build collection objects here - collections = [] - for data_set in response.json()['features']: - collections.append(Collection(data_set['id'])) - - return collections - - def get_collection_data(self, collection: type = Collection, limit=10, filter: str = None, output_stac=False): + try: + result = self.query_collections(limit) + if output_stac: + return result + result = [UnityCollection(k['id']) for k in result['features']] + except Exception as e: + raise UnityException(e) + return result + + def get_collection_data(self, collection:UnityCollection, limit=10, filter: str = None, output_stac=False): + warnings.warn("get_collection_data is deprecated and will be removed in future versions. Use query_granules instead.", category=DeprecationWarning, stacklevel=2) datasets = [] - url = self.endpoint + f'am-uds-dapa/collections/{collection.collection_id}/items' - token = self._session.get_auth().get_token() - params = {"limit": limit} - if filter is not None: - params["filter"] = filter - response = requests.get(url, headers={"Authorization": "Bearer " + token}, params=params) - if output_stac: - return response.json() - results = response.json()['features'] - - for dataset in results: - ds = Dataset(dataset['id'], collection.collection_id, dataset['properties']['start_datetime'], dataset['properties']['end_datetime'], dataset['properties']['created'], properties=dataset['properties']) - - for asset_key in dataset['assets']: - location = dataset['assets'][asset_key]['href'] - file_type = dataset['assets'][asset_key].get('type', "") - title = dataset['assets'][asset_key].get('title', "") - description = dataset['assets'][asset_key].get('description', "") - roles = dataset['assets'][asset_key]["roles"] if "roles" in dataset['assets'][asset_key] else ["metadata"] if asset_key in ['metadata__cmr','metadata__data'] else [asset_key] - ds.add_data_file(DataFile(file_type, location, roles=roles, title=title, description=description)) - - datasets.append(ds) - + try: + self.__update_setting(collection.collection_id) + result = self.query_granules(limit=limit, filter=filter) + if output_stac: + return result + # result = [Item.from_dict(k) for k in result] + for dataset in result['features']: + ds = Dataset(dataset['id'], collection.collection_id, dataset['properties']['start_datetime'], + dataset['properties']['end_datetime'], dataset['properties']['created'], + properties=dataset['properties']) + + for asset_key in dataset['assets']: + location = dataset['assets'][asset_key]['href'] + file_type = dataset['assets'][asset_key].get('type', "") + title = dataset['assets'][asset_key].get('title', "") + description = dataset['assets'][asset_key].get('description', "") + roles = dataset['assets'][asset_key]["roles"] if "roles" in dataset['assets'][asset_key] else [ + "metadata"] if asset_key in ['metadata__cmr', 'metadata__data'] else [asset_key] + ds.add_data_file(DataFile(file_type, location, roles=roles, title=title, description=description)) + + datasets.append(ds) + + + except Exception as e: + raise UnityException(e) return datasets - def create_collection(self, collection: type = Collection, dry_run=False): - - # Collection must not be None - if collection is None: - raise UnityException("Invalid collection provided.") - - # test version Information? - - # Test collection ID name: project and venue - if self._session._project is None or self._session._venue is None: - raise UnityException("To create a collection, the Unity session Project and Venue must be set!") - - if not collection.collection_id.startswith(f"urn:nasa:unity:{self._session._project}:{self._session._venue}"): - raise UnityException(f"Collection Identifiers must start with urn:nasa:unity:{self._session._project}:{self._session._venue}") - - collection = { - "title": "Collection " + collection.collection_id, - "type": "Collection", - "id": collection.collection_id, - "stac_version": "1.0.0", - "description": "TODO", - "providers": [ - {"name": "unity"} - ], - "links": [ - { - "rel": "root", - "href": "./collection.json?bucket=unknown_bucket®ex=%7BcmrMetadata.Granule.Collection.ShortName%7D___%7BcmrMetadata.Granule.Collection.VersionId%7D", - "type": "application/json", - "title": "test_file01.nc" - }, - { - "rel": "item", - "href": "./collection.json?bucket=protected®ex=%5Etest_file.%2A%5C.nc%24", - "type": "data", - "title": "test_file01.nc" - }, - { - "rel": "item", - "href": "./collection.json?bucket=protected®ex=%5Etest_file.%2A%5C.nc%5C.cas%24", - "type": "metadata", - "title": "test_file01.nc.cas" - }, - { - "rel": "item", - "href": "./collection.json?bucket=private®ex=%5Etest_file.%2A%5C.cmr%5C.xml%24", - "type": "metadata", - "title": "test_file01.cmr.xml" - } - ], - "stac_extensions": [], - "extent": { - "spatial": { - "bbox": [ - [ - 0, - 0, - 0, - 0 - ] - ] - }, - "temporal": { - "interval": [ - [ - "2022-10-04T00:00:00.000Z", - "2022-10-04T23:59:59.999Z" - ] - ] - } - }, - "license": "proprietary", - "summaries": { - "granuleId": [ - "^test_file.*$" - ], - "granuleIdExtraction": [ - "(^test_file.*)(\\.nc|\\.nc\\.cas|\\.cmr\\.xml)" - ], - "process": [ - "stac" - ] - } - } - if not dry_run: - url = self.endpoint + f'am-uds-dapa/collections' - token = self._session.get_auth().get_token() - response = requests.post(url, headers={"Authorization": "Bearer " + token}, json=collection) - if response.status_code != 202: - raise UnityException("Error creating collection: " + response.message) + def create_collection(self, collection: UnityCollection, dry_run=False): + warnings.warn("create_collection is deprecated and will be removed in future versions. Use create_new_collection instead.", category=DeprecationWarning, stacklevel=2) + try: + self.__update_setting(collection.collection_id) + if dry_run: + return + self.create_new_collection() + except Exception as e: + raise UnityException(e) + return def define_custom_metadata(self, metadata: dict): - if self._session._project is None or self._session._venue is None: - raise UnityException("To add custom metadata, the Unity session Project and Venue must be set!") - - url = self.endpoint + f'am-uds-dapa/admin/custom_metadata/{self._session._project}' - token = self._session.get_auth().get_token() - response = requests.put(url, headers={"Authorization": "Bearer " + token}, - params={"venue": self._session._venue}, json=metadata) - if response.status_code != 200: - raise UnityException("Error adding custom metadata: " + response.message) + self.add_tenant_database_index(metadata) + return - def delete_collection_item(self, collection: type = Collection, granule_id: str = None): + def delete_collection_item(self, collection: UnityCollection, granule_id: str = None): + warnings.warn("delete_collection_item is deprecated and will be removed in future versions. Use delete_single_granule instead.", category=DeprecationWarning, stacklevel=2) """ Delete a granule from given a collection Parameters @@ -201,25 +134,24 @@ def delete_collection_item(self, collection: type = Collection, granule_id: str granule_id: String The granule id to delete - """ + """ if (granule_id == "") or (granule_id is None): - raise Exception("Error deleting collection data: Please provide granule ID") - - else: - url = f'{self.endpoint}am-uds-dapa/collections/{collection.collection_id}/items/{granule_id}/' - token = self._session.get_auth().get_token() - header = {"Authorization": f"Bearer {token}"} - response = requests.delete(url=url, headers=header) - print(response.status_code) - if response.status_code != 200: - raise UnityException("Error deleting collection: " + response.reason) - - def delete_dataset(self, dataset: type = Dataset): + raise UnityException("Error deleting collection data: Please provide granule ID") + try: + self.__update_setting(collection.collection_id) + self.granule = granule_id.replace(collection.collection_id, '')[1:] if granule_id.startswith(collection.collection_id) else granule_id + self.delete_single_granule() + except Exception as e: + raise UnityException("Error deleting collection: " + e) + return + + def delete_dataset(self, dataset: Dataset): + warnings.warn("delete_dataset is deprecated and will be removed in future versions. Use delete_single_granule instead.", category=DeprecationWarning, stacklevel=2) """ - Delete an item from a Collection given Dataset object + Delete an item from a Collection given Dataset object Parameters ---------- dataset: Dataset """ - self.delete_collection_item(Collection(dataset.collection_id), dataset.id) + return