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CI: Fix Meson mixup between Conda and system Python headers #1477

CI: Fix Meson mixup between Conda and system Python headers

CI: Fix Meson mixup between Conda and system Python headers #1477

Triggered via pull request April 21, 2026 12:37
Status Cancelled
Total duration 1m 38s
Artifacts

ci.yaml

on: pull_request
Matrix: build
Matrix: test-crc32c
Matrix: test-zarr
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28 errors and 36 warnings
build (3.12, ubuntu-22.04-arm)
Process completed with exit code 1.
build (3.13, ubuntu-22.04-arm)
Process completed with exit code 1.
test-crc32c (crc32c, crc32c)
Process completed with exit code 1.
test-crc32c (no-crc32c)
Process completed with exit code 1.
test-crc32c (google-crc32c, google_crc32c)
Process completed with exit code 1.
build (3.14, ubuntu-22.04-arm)
Process completed with exit code 1.
test-zarr (308, zarr==3.0.8)
Process completed with exit code 1.
build (3.14, ubuntu-latest)
Process completed with exit code 1.
test-zarr (316, zarr==3.1.6)
Process completed with exit code 1.
build (3.13, ubuntu-latest)
Process completed with exit code 1.
build (3.12, ubuntu-latest)
Process completed with exit code 1.
build (3.13, macos-14)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.14, macos-14)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.12, macos-14)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.13, windows-latest)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.13, windows-latest)
The operation was canceled.
build (3.12, windows-latest)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.12, windows-latest)
The operation was canceled.
build (3.14, windows-latest)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.14, windows-latest)
The operation was canceled.
build (3.12, macos-15-large)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.12, macos-15-large)
The operation was canceled.
build (3.14, macos-15-large)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.14, macos-15-large)
The operation was canceled.
build (3.13, macos-15-large)
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.13, macos-15-large)
The operation was canceled.
Tests
Canceling since a higher priority waiting request for Tests-refs/pull/839/merge exists
build (3.12, ubuntu-22.04-arm)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.12, ubuntu-22.04-arm)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.13, ubuntu-22.04-arm)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.13, ubuntu-22.04-arm)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-crc32c (crc32c, crc32c)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
test-crc32c (crc32c, crc32c)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-crc32c (no-crc32c)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
test-crc32c (no-crc32c)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-crc32c (google-crc32c, google_crc32c)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
test-crc32c (google-crc32c, google_crc32c)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.14, ubuntu-22.04-arm)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.14, ubuntu-22.04-arm)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-zarr (308, zarr==3.0.8)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
test-zarr (308, zarr==3.0.8)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.14, ubuntu-latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.14, ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-zarr (main, zarr @ git+https://github.com/zarr-developers/zarr-python.git@main)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
test-zarr (main, zarr @ git+https://github.com/zarr-developers/zarr-python.git@main)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-zarr (316, zarr==3.1.6)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
test-zarr (316, zarr==3.1.6)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.13, ubuntu-latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.13, ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.12, ubuntu-latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.12, ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.13, windows-latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.13, windows-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.12, windows-latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.12, windows-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.14, windows-latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.14, windows-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.12, macos-15-large)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.12, macos-15-large)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.14, macos-15-large)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.14, macos-15-large)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
build (3.13, macos-15-large)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3.2.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build (3.13, macos-15-large)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.