-
Notifications
You must be signed in to change notification settings - Fork 20
Expand file tree
/
Copy pathartifact_index.py
More file actions
314 lines (272 loc) · 10.9 KB
/
artifact_index.py
File metadata and controls
314 lines (272 loc) · 10.9 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
from __future__ import annotations
import csv
import json
from dataclasses import dataclass, field
from datetime import datetime
from pathlib import Path
from .utils import FIGURE_SUFFIXES, MACHINE_DATA_SUFFIXES, RESULT_SUFFIXES, RunPaths
@dataclass(frozen=True)
class ArtifactRecord:
category: str
rel_path: str
filename: str
suffix: str
size_bytes: int
updated_at: str
schema: dict[str, object] = field(default_factory=dict)
def to_dict(self) -> dict[str, object]:
return {
"category": self.category,
"rel_path": self.rel_path,
"filename": self.filename,
"suffix": self.suffix,
"size_bytes": self.size_bytes,
"updated_at": self.updated_at,
"schema": self.schema,
}
@classmethod
def from_dict(cls, payload: dict[str, object]) -> "ArtifactRecord":
return cls(
category=str(payload.get("category", "")).strip(),
rel_path=str(payload.get("rel_path", "")).strip(),
filename=str(payload.get("filename", "")).strip(),
suffix=str(payload.get("suffix", "")).strip(),
size_bytes=int(payload.get("size_bytes", 0)),
updated_at=str(payload.get("updated_at", "")).strip(),
schema=dict(payload.get("schema", {})),
)
@dataclass(frozen=True)
class ArtifactIndex:
generated_at: str
artifact_count: int
counts_by_category: dict[str, int]
artifacts: list[ArtifactRecord]
def to_dict(self) -> dict[str, object]:
return {
"generated_at": self.generated_at,
"artifact_count": self.artifact_count,
"counts_by_category": dict(self.counts_by_category),
"artifacts": [artifact.to_dict() for artifact in self.artifacts],
}
@classmethod
def from_dict(cls, payload: dict[str, object]) -> "ArtifactIndex":
artifacts = [
ArtifactRecord.from_dict(item)
for item in payload.get("artifacts", [])
if isinstance(item, dict)
]
return cls(
generated_at=str(payload.get("generated_at", "")).strip(),
artifact_count=int(payload.get("artifact_count", len(artifacts))),
counts_by_category={
str(key): int(value)
for key, value in dict(payload.get("counts_by_category", {})).items()
},
artifacts=artifacts,
)
def write_artifact_index(paths: RunPaths) -> ArtifactIndex:
artifacts = _scan_artifacts(paths)
counts_by_category = {
category: len([artifact for artifact in artifacts if artifact.category == category])
for category in ("data", "results", "figures")
}
index = ArtifactIndex(
generated_at=datetime.now().isoformat(timespec="seconds"),
artifact_count=len(artifacts),
counts_by_category=counts_by_category,
artifacts=artifacts,
)
paths.artifact_index.write_text(
json.dumps(index.to_dict(), indent=2, ensure_ascii=True) + "\n",
encoding="utf-8",
)
return index
def ensure_artifact_index(paths: RunPaths) -> ArtifactIndex:
index = load_artifact_index(paths.artifact_index)
if index is not None:
return index
return write_artifact_index(paths)
def load_artifact_index(path: Path) -> ArtifactIndex | None:
if not path.exists():
return None
payload = json.loads(path.read_text(encoding="utf-8"))
return ArtifactIndex.from_dict(payload)
def format_artifact_index_for_prompt(index: ArtifactIndex, max_entries_per_category: int = 5) -> str:
if not index.artifacts:
return "No structured data, result, or figure artifacts have been indexed yet."
lines = [
f"Artifact index generated at: {index.generated_at}",
f"Indexed artifacts: {index.artifact_count}",
]
for category in ("data", "results", "figures"):
entries = [artifact for artifact in index.artifacts if artifact.category == category]
if not entries:
continue
lines.append(f"\n### {category.title()}")
for artifact in entries[:max_entries_per_category]:
schema_bits = _schema_summary(artifact.schema)
suffix_label = artifact.suffix.lstrip(".") or "file"
summary = f"- `{artifact.rel_path}` ({suffix_label}, {artifact.size_bytes} bytes)"
if schema_bits:
summary += f" | {schema_bits}"
lines.append(summary)
remaining = len(entries) - max_entries_per_category
if remaining > 0:
lines.append(f"- ... {remaining} more {category} artifacts indexed.")
return "\n".join(lines)
def indexed_artifacts_for_category(index: ArtifactIndex, category: str) -> list[dict[str, object]]:
return [
artifact.to_dict()
for artifact in index.artifacts
if artifact.category == category
]
def _scan_artifacts(paths: RunPaths) -> list[ArtifactRecord]:
records: list[ArtifactRecord] = []
for category, directory, suffixes in (
("data", paths.data_dir, MACHINE_DATA_SUFFIXES),
("results", paths.results_dir, RESULT_SUFFIXES),
("figures", paths.figures_dir, FIGURE_SUFFIXES),
):
if not directory.exists():
continue
for path in sorted(directory.rglob("*")):
if not path.is_file() or path.suffix.lower() not in suffixes:
continue
if path.name.endswith(".schema.json"):
continue
if category == "results" and path.name == "experiment_manifest.json":
continue
stat = path.stat()
records.append(
ArtifactRecord(
category=category,
rel_path=str(path.relative_to(paths.workspace_root)),
filename=path.name,
suffix=path.suffix.lower(),
size_bytes=stat.st_size,
updated_at=datetime.fromtimestamp(stat.st_mtime).isoformat(timespec="seconds"),
schema=_infer_schema(path, category, paths.workspace_root),
)
)
return records
def _infer_schema(path: Path, category: str, workspace_root: Path) -> dict[str, object]:
sidecar_path = path.parent / f"{path.name}.schema.json"
if sidecar_path.exists():
try:
declared = json.loads(sidecar_path.read_text(encoding="utf-8"))
return {
"source": "declared",
"sidecar_path": str(sidecar_path.relative_to(workspace_root)),
"definition": declared,
}
except json.JSONDecodeError:
return {
"source": "declared",
"sidecar_path": str(sidecar_path.relative_to(workspace_root)),
"error": "invalid_json",
}
suffix = path.suffix.lower()
if suffix == ".json":
return _infer_json_schema(path)
if suffix == ".jsonl":
return _infer_jsonl_schema(path)
if suffix in {".csv", ".tsv"}:
return _infer_tabular_schema(path, delimiter="\t" if suffix == ".tsv" else ",")
if suffix in {".yaml", ".yml"}:
return {"source": "inferred", "kind": "yaml_document"}
if suffix == ".parquet":
return {"source": "inferred", "kind": "parquet_table"}
if suffix == ".npz":
return {"source": "inferred", "kind": "numpy_archive"}
if suffix == ".npy":
return {"source": "inferred", "kind": "numpy_array"}
if category == "figures":
return {"source": "inferred", "kind": "figure", "format": suffix.lstrip(".")}
return {"source": "inferred", "kind": "file"}
def _infer_json_schema(path: Path) -> dict[str, object]:
try:
payload = json.loads(path.read_text(encoding="utf-8"))
except json.JSONDecodeError:
return {"source": "inferred", "kind": "json", "error": "invalid_json"}
if isinstance(payload, dict):
return {
"source": "inferred",
"kind": "object",
"keys": sorted(str(key) for key in payload.keys())[:20],
}
if isinstance(payload, list):
item_keys: set[str] = set()
for item in payload[:20]:
if isinstance(item, dict):
item_keys.update(str(key) for key in item.keys())
schema: dict[str, object] = {
"source": "inferred",
"kind": "array",
"item_count": len(payload),
}
if item_keys:
schema["item_keys"] = sorted(item_keys)
return schema
return {
"source": "inferred",
"kind": type(payload).__name__,
}
def _infer_jsonl_schema(path: Path) -> dict[str, object]:
row_count = 0
keys: set[str] = set()
with path.open("r", encoding="utf-8") as handle:
for raw_line in handle:
line = raw_line.strip()
if not line:
continue
row_count += 1
try:
payload = json.loads(line)
except json.JSONDecodeError:
return {"source": "inferred", "kind": "jsonl", "error": "invalid_jsonl"}
if isinstance(payload, dict):
keys.update(str(key) for key in payload.keys())
schema: dict[str, object] = {
"source": "inferred",
"kind": "jsonl",
"row_count": row_count,
}
if keys:
schema["keys"] = sorted(keys)
return schema
def _infer_tabular_schema(path: Path, delimiter: str) -> dict[str, object]:
with path.open("r", encoding="utf-8", newline="") as handle:
reader = csv.reader(handle, delimiter=delimiter)
rows = list(reader)
if not rows:
return {"source": "inferred", "kind": "table", "columns": [], "row_count": 0}
header = [column.strip() for column in rows[0]]
return {
"source": "inferred",
"kind": "table",
"columns": header,
"row_count": max(len(rows) - 1, 0),
}
def _schema_summary(schema: dict[str, object]) -> str:
if not schema:
return ""
kind = str(schema.get("kind") or schema.get("source") or "").strip()
parts: list[str] = [kind] if kind else []
if isinstance(schema.get("columns"), list) and schema["columns"]:
columns = ", ".join(str(column) for column in schema["columns"][:6])
parts.append(f"columns={columns}")
if isinstance(schema.get("keys"), list) and schema["keys"]:
keys = ", ".join(str(key) for key in schema["keys"][:6])
parts.append(f"keys={keys}")
if isinstance(schema.get("item_keys"), list) and schema["item_keys"]:
keys = ", ".join(str(key) for key in schema["item_keys"][:6])
parts.append(f"item_keys={keys}")
if "row_count" in schema:
parts.append(f"rows={schema['row_count']}")
if "item_count" in schema:
parts.append(f"items={schema['item_count']}")
if "sidecar_path" in schema:
parts.append(f"schema={schema['sidecar_path']}")
if "error" in schema:
parts.append(f"error={schema['error']}")
return ", ".join(part for part in parts if part)