Restrict fenics-dolfinx version range (#166) #1217
Workflow file for this run
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| name: tests | |
| on: | |
| push: | |
| branches-ignore: | |
| pull_request: | |
| branches: [ main ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # Runs the workflow once per day at 3:15am | |
| schedule: | |
| - cron: '3 16 * * *' | |
| env: | |
| CACHE_NUMBER: 1 # increase to reset cache manually | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| branch_coverage: ${{ steps.pytest.outputs.coverage }} | |
| coverage_report: ${{ steps.pytest.outputs.report }} | |
| steps: | |
| - name: checkout repo content | |
| uses: actions/checkout@v2 | |
| - name: install-extra-deps | |
| uses: ./.github/actions/install-extra-deps | |
| - name: Setup Mambaforge | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniforge-version: latest | |
| activate-environment: fenicsxconcrete | |
| use-mamba: true | |
| - name: Set cache date | |
| run: echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV | |
| - uses: actions/cache@v3 | |
| with: | |
| path: "/usr/share/miniconda3/envs/fenicsxconcrete" | |
| key: conda-${{ hashFiles('environment.yml') }}-${{ env.DATE }}-${{ env.CACHE_NUMBER }} | |
| id: cache | |
| - name: Update environment | |
| run: mamba env update -n fenicsxconcrete -f environment.yml | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| - name: pytest | |
| id : pytest | |
| shell: bash -l {0} | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| pytest | |
| # cd $GITHUB_WORKSPACE | |
| # # grab the coverage output and also print it to the screen | |
| # coverage run -m pytest -s -W error::UserWarning | |
| # coverage xml | |
| # COVERAGE_REPORT=$(coverage report -m | tee /dev/stderr) | |
| # # passing a multiline string to output to use it in next job | |
| # echo "report<<EOF" >> $GITHUB_OUTPUT | |
| # echo "$COVERAGE_REPORT" >> $GITHUB_OUTPUT | |
| # echo "EOF" >> $GITHUB_OUTPUT | |
| # # extract the percentage of the total coverage, e.g. `75%` | |
| # COVERAGE_PCT=$(echo $COVERAGE_REPORT | grep -oP "TOTAL\s+\d+\s+\d+\s+(\d+%)" | grep -oP "\d+%") | |
| # # get only the coverage number without the percentage symbol | |
| # COVERAGE_NUM=$(echo $COVERAGE_PCT | grep -oP "\d+") | |
| # # active branch name | |
| # BRANCH_NAME=$(echo ${GITHUB_REF#refs/heads/}) | |
| # # add them to the github env for later usage | |
| # echo "COVERAGE_NUM=$(echo $COVERAGE_NUM)" >> $GITHUB_ENV | |
| # echo "coverage=$(echo $COVERAGE_NUM)" >> $GITHUB_OUTPUT # to be used in next job | |
| # echo "COVERAGE_PCT=$(echo $COVERAGE_PCT)" >> $GITHUB_ENV | |
| # # removing all possible slashes in file names, they seem to appear during Pull Requests | |
| # echo "BRANCH_NAME=$(echo $BRANCH_NAME | sed "s/\//_/g")" >> $GITHUB_ENV | |
| # - name: execute example scripts | |
| # shell: bash -l {0} | |
| # run: | | |
| # for file in docs/examples/*.py | |
| # do | |
| # python $file | |
| # done | |
| # - name: test docs | |
| # shell: bash -l {0} | |
| # run: | | |
| # cd docs | |
| # make html | |
| # - name: Create Coverage Badge | |
| # if: contains(env.BRANCH_NAME, 'main') | |
| # uses: schneegans/[email protected] | |
| # with: | |
| # auth: ${{ secrets.GIST_TOKEN }} | |
| # gistID: c10a5b6d0714b1fe2344eb60918e92f8 | |
| # filename: fenicsxconcrete_${{ env.BRANCH_NAME }}_coverage.json | |
| # label: coverage | |
| # message: ${{ env.COVERAGE_PCT }} | |
| # valColorRange: ${{ env.COVERAGE_PCT }} | |
| # maxColorRange: 95 # value where ligth green starts | |
| # minColorRange: 50 # value where red starts | |
| # check_coverage: | |
| # needs: tests | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - name: check coverage | |
| # run: | | |
| # # getting coverage number from output of first job for this branch | |
| # BRANCH_COVERAGE=${{ needs.tests.outputs.branch_coverage }} | |
| # echo "Coverage of current branch: $BRANCH_COVERAGE" | |
| # declare -i int_branch_coverage=$BRANCH_COVERAGE | |
| # # getting coverage number from gist for main branch | |
| # MAIN_DATA=$(curl -s -X GET "https://gist.githubusercontent.com/eriktamsen/c10a5b6d0714b1fe2344eb60918e92f8/raw/fenicsxconcrete_main_coverage.json") | |
| # MAIN_COVERAGE=$(echo $MAIN_DATA | grep -o -P 'message.{3,6}' | sed -e 's/"//g' | sed -e 's/://g' | sed -e 's/message//g' | sed -e 's/%//g' | sed -e 's/,//g') | |
| # echo "Coverage of main branch: $MAIN_COVERAGE" | |
| # declare -i int_main_coverage=$MAIN_COVERAGE | |
| # # compute difference | |
| # delta_coverage=$(( int_branch_coverage - int_main_coverage )) | |
| # echo "Increase in coverage: $delta_coverage" | |
| # echo "Coverage report:" | |
| # echo "-----------------------------------------------------------------------------------------------" | |
| # echo "${{ needs.tests.outputs.coverage_report }}" | |
| # echo "-----------------------------------------------------------------------------------------------" | |
| # if [[ $delta_coverage -lt 0 ]] | |
| # then | |
| # echo "The current branch has lower coverage than the main branch, please improve your code" | |
| # exit 1 | |
| # fi | |
| # echo "Passing!!!" | |