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dakotablairdakotablair
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Create a new image for end-to-end tests of CV2.
This commit creates a new image, with corresponding support scripts, to run the end-to-end tests for the chimbuko-visualization2 (CV2) package. A README is included to explain its usage. This commit also updates some of the spack package dependencies for the CV2 package. There seem to be more incompatibilities that will need to be resolved in order to fully upgrade CV2.
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‎docker/ubuntu18.04/openmpi4.0.4/all_spack/Dockerfile.spack_dev_ddb‎

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FROM chimbuko/chimbuko-spack-env:ubuntu18.04
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RUN apt-get update && apt-get install -y emacs-nox gdb tmux vim
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WORKDIR /src
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RUN echo 0.0.5
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RUN git clone https://github.com/CODARcode/PerformanceAnalysis.git \
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--branch ckelly_develop_ddb \
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&& git -C PerformanceAnalysis checkout ckelly_develop_ddb \
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&& cp -r PerformanceAnalysis/spack/repo/chimbuko /sds/ \
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&& cp -r PerformanceAnalysis/benchmark_suite . \
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&& rm -rf PerformanceAnalysis
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ENV TAU_OPTIONS="-optShared -optRevert -optVerbose -optCompInst"
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WORKDIR /bld/benchmark_suite/func_multimodal
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RUN cp -s /src/benchmark_suite/func_multimodal/main.C . \
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&& cp /src/benchmark_suite/func_multimodal/*.sh . \
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&& cp /src/benchmark_suite/func_multimodal/Makefile .
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RUN source /spack/spack/share/spack/setup-env.sh \
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&& cd /opt/spack-environment && spack env activate . \
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&& cd - \
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&& make
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COPY docker/ubuntu18.04/openmpi4.0.4/all_spack/env.yaml \
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/opt/spack-environment/spack.yaml
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RUN source /spack/spack/share/spack/setup-env.sh \
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&& cd /opt/spack-environment \
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&& spack env activate . \
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&& spack concretize -f \
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&& spack install \
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&& spack gc -y \
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&& spack clean -a
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COPY docker/ubuntu18.04/openmpi4.0.4/all_spack/chimbuko_config.sh \
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/bld/benchmark_suite/func_multimodal/
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COPY scripts/docker/spack_dev_ddb.sh /build.spack.sh
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RUN /build.spack.sh
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COPY scripts/docker/spack_dev_ddb.rcfile.sh /rcfile.sh
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# ENTRYPOINT ["/bin/bash"] # see Dockerfile.spack_env
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CMD ["--rcfile", "/rcfile.sh"]
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‎docker/ubuntu18.04/openmpi4.0.4/all_spack/README.md‎

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# Dockerfiles
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## `Dockerfile.spack_dev_ddb`
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This Dockerfile defines an image which can be used to validate the visualization
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package upgrades. The build will clone the `chimbuko-visualization2` (CV2) repository
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and checkout the `dependency_upgrades` branch. Here is how to use this image to
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test changes to CV2:
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1. Build the image.
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2. Use `docker ps` to find an open port `HOST_PORT`.
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3. Then running the image with the `HOST_PORT` will execute `run.sh` and start
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the server simulation.
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4. Load the frontend in a browser (`http://hostname:$HOST_PORT`).
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### Build the image.
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```sh
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docker build \
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-f docker/ubuntu18.04/openmpi4.0.4/all_spack/Dockerfile.spack_dev_ddb \
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-t chimbuko/chimbuko-spack-dev-ddb:ubuntu18.04 \
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.
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```
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### Run the image.
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```sh
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docker run --rm -it --cap-add=SYS_PTRACE --security-opt seccomp=unconfined \
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-p $HOST_PORT:5002 \
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-v $(pwd):$(pwd) \
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-name ddb-csd \
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chimbuko/chimbuko-spack-dev:ubuntu18.04
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```
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‎docker/ubuntu18.04/openmpi4.0.4/all_spack/env.yaml‎

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- chimbuko-performance-analysis @git.bcb0f724d8579abeb620a0f9f4a9fdd839f3475f ^mochi-sonata~bedrock~unqlite_st ^[email protected]
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- tau+mpi+openmp+adios2+python+binutils@git.9ec064a2f5ebc6deb63cfb3c10595ccba902b017=2.33.1
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- libfabric fabrics=sockets,tcp,udp,rxm
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- chimbuko-visualization2 @git.8568d3c2ecdabfd61634a603e64e4a408cb731fc ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected]
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- chimbuko-visualization2 @git.dependency_upgrades=dev ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected] ^[email protected]
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concretizer:
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unify: true
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compilers:

‎scripts/docker/spack_dev_ddb.rcfile.sh‎

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#!/bin/bash
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set -eux
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source /spack/spack/share/spack/setup-env.sh
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cd /opt/spack-environment/
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spack env activate .
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export CHIMBUKO_VIZ_ROOT=$(spack location -i chimbuko-visualization2)
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cd /bld/benchmark_suite/func_multimodal
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./run.sh

‎scripts/docker/spack_dev_ddb.sh‎

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#!/bin/bash
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set -eux
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source /spack/spack/share/spack/setup-env.sh
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cd /opt/spack-environment/
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spack env activate .
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spack develop chimbuko-visualization2 @git.dependency_upgrades=dev
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spack concretize -f
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spack install
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cd /opt/spack-environment/chimbuko-visualization2
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# git checkout dependency_upgrades
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# spack install

‎spack/repo/chimbuko/packages/chimbuko-visualization2/package.py‎

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"""The Visualization component of Chimbuko"""
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homepage = "https://github.com/CODARcode/ChimbukoVisualizationII"
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git = "https://github.com/CODARcode/ChimbukoVisualizationII"
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git = "https://github.com/dakotablair/ChimbukoVisualizationII"
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version('master', branch='master')
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version('dependency_upgrades', branch='dependency_upgrades')
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depends_on('python@3:')
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depends_on('python@3.8')
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depends_on('py-mochi-sonata', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:4.4', type=('build', 'run'))
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# depends_on('[email protected]:2024.7', type=('build', 'run'))
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depends_on('py-certifi', type=('build', 'run'))
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# depends_on('[email protected]:2.6', type=('build', 'run'))
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depends_on('py-dnspython', type=('build', 'run'))
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# depends_on('[email protected]:0.35', type=('build', 'run'))
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depends_on('py-eventlet', type=('build', 'run'))
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# depends_on('py-flask-script@=2.0.6', type=('build', 'run'))
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depends_on('py-flask-script', type=('build', 'run'))
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depends_on('[email protected]:2.9', type=('build', 'run'))
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depends_on('[email protected]:2.5', type=('build', 'run'))
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depends_on('py-flask@=1.1.2', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build','run'))
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# depends_on('[email protected]:', type=('build', 'run'))
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depends_on('py-idna', type=('build', 'run'))
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# depends_on('[email protected]:3.0', type=('build', 'run'))
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depends_on('py-jinja2', type=('build', 'run'))
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depends_on('[email protected]:4.5', type=('build', 'run'))
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# depends_on('[email protected]:', type=('build','run'))
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depends_on('py-requests', type=('build','run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('py-urllib@1.26.19:', type=('build', 'run'))
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depends_on('[email protected]:1.4', type=('build', 'run'))
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# depends_on('py-urllib3@1.26.19:1.26', type=('build', 'run'))
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depends_on('[email protected]:', type=('build', 'run'))
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depends_on('redis', type='run')
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depends_on('curl', type='run')

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