samples.csv

sample_name,wcmc_code,autopsy_code,acquisition_name,acquisition_date,acquisition_id,disease,organ,phenotypes,instrument,panel_annotation_file,panel_version,panel_file,observations,mcd_file
20200728_NL6699,,S19-6699,20200728_NL6699,20200728,NL6699,Healthy,Lung,Healthy,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200728_NL6699/20200728_NL6699.mcd
20200804_NL1933A_RUN2,,A19-33,20200804_NL1933A_RUN2,20200804,NL1933A_RUN2,Healthy,Lung,Healthy,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200804_NL1933A_RUN2/20200804_NL1933A_RUN2.mcd
20200629_NL1915A,,A19-15,20200629_NL1915A,20200630,NL1915A,Healthy,Lung,Healthy,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200629_NL1915A/20200629_NL1915A.mcd
20200702_NL_ARCHOI114,,Archoi104,20200702_NL_ARCHOI114,20200702,NL_ARCHOI114,Healthy,Lung,Healthy,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200702_NL_ARCHOI114/20200702_NL_ARCHOI114.mcd
20200714_FLU_205,,A20-5,20200714_FLU_205,20200714,FLU_205,FLU,Lung,Flu,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200714_FLU_205/20200714_FLU_205.mcd
20200612_FLU_1923,,A19-23,20200612_FLU_1923,20200612,FLU_1923,FLU,Lung,Flu,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200612_FLU_1923/20200612_FLU_1923.mcd
20200812_ARDS_SEPSIS_1966,,A19-66,20200812_ARDS_SEPSIS_1966,20200812,ARDS_SEPSIS_1966,ARDS,Lung,ARDS,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200812_ARDS_SEPSIS_1966/20200812_ARDS_SEPSIS_1966.mcd
20200807_ARDS_SEPSIS_19142,,A19-142,20200807_ARDS_SEPSIS_19142,20200807,ARDS_SEPSIS_19142,ARDS,Lung,ARDS,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200807_ARDS_SEPSIS_19142/20200807_ARDS_SEPSIS_19142.mcd
20200810_ARDS_SEPSIS_19135,,A19-135,20200810_ARDS_SEPSIS_19135,20200810,ARDS_SEPSIS_19135,ARDS,Lung,ARDS,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200810_ARDS_SEPSIS_19135/20200810_ARDS_SEPSIS_19135.mcd
20200609_ARDS_1921,,A19-21,20200609_ARDS_1921,20200609,ARDS_1921,ARDS,Lung,ARDS,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200609_ARDS_1921/20200609_ARDS_1921.mcd
20200806_ARDS_PNE1920,,A19-20 a24,20200806_ARDS_PNE1920,20200806,ARDS_PNE1920,ARDS,Lung,Pneumonia,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200806_ARDS_PNE1920/20200806_ARDS_PNE1920.mcd
20200610_ARDS_PNE19127,,A19-127,20200610_ARDS_PNE19127,20200610,ARDS_PNE19127,ARDS,Lung,Pneumonia,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200610_ARDS_PNE19127/20200610_ARDS_PNE19127.mcd
20200613_ARDS_PNE19100,,A19-100,20200613_ARDS_PNE19100,20200613,ARDS_PNE19100,ARDS,Lung,Pneumonia,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200613_ARDS_PNE19100/20200613_ARDS_PNE19100.mcd
20200713_COVID_3_EARLY,WCMC003,A20-47,20200713_COVID_3_EARLY,20200713,COVID_3_EARLY,COVID19,Lung,COVID19_early,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200713_COVID_3_EARLY/20200713_COVID_3_EARLY.mcd
20200619_COVID_12_EARLY,WCMC012,A20-58,20200619_COVID_12_EARLY,20200619,COVID_12_EARLY,COVID19,Lung,COVID19_early,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200619_COVID_12_EARLY/20200619_COVID_12_EARLY.mcd
20200630_COVID_10_EARLY_RUN2,WCMC010,A20-55,20200630_COVID_10_EARLY_RUN2,20200630,COVID_10_EARLY_RUN2,COVID19,Lung,COVID19_early,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200630_COVID_10_EARLY_RUN2/20200630_COVID_10_EARLY_RUN2.mcd
20200716_COVID_1_EARLY,WCMC001,A20-42,20200716_COVID_1_EARLY,20200716,COVID_1_EARLY,COVID19,Lung,COVID19_early,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200716_COVID_1_EARLY/20200716_COVID_1_EARLY.mcd
20200721_COVID_30_LATE_RUN2,WCMC030,A20-79,20200721_COVID_30_LATE_RUN2,20200721,COVID_30_LATE_RUN2,COVID19,Lung,COVID19_late,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200721_COVID_30_LATE_RUN2/20200721_COVID_30_LATE_RUN2.mcd
20200722_COVID_28_EARLY,WCMC028,A20-77,20200722_COVID_28_EARLY,20200722,COVID_28_EARLY,COVID19,Lung,COVID19_late,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200722_COVID_28_EARLY/20200722_COVID_28_EARLY.mcd
20200724_COVID_24_LATE,WCMC024,A20-72,20200724_COVID_24_LATE,20200724,COVID_24_LATE,COVID19,Lung,COVID19_late,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200724_COVID_24_LATE/20200724_COVID_24_LATE.mcd
20200623_COVID_23_LATE,WCMC023,A20-71,20200623_COVID_23_LATE,20200623,COVID_23_LATE,COVID19,Lung,COVID19_late,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200623_COVID_23_LATE/20200623_COVID_23_LATE.mcd
20200708_COVID_21_LATE,WCMC021,A20-69,20200708_COVID_21_LATE,20200708,COVID_21_LATE,COVID19,Lung,COVID19_late,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200708_COVID_21_LATE/20200708_COVID_21_LATE.mcd
20200701_COVID_11_LATE,WCMC011,A20-56,20200701_COVID_11_LATE,20200701,COVID_11_LATE,COVID19,Lung,COVID19_late,fluidigm_hyperion,metadata/panel_markers.COVID19-2.csv,,,,data/20200701_COVID_11_LATE/20200701_COVID_11_LATE.mcd