|
10 | 10 | }, |
11 | 11 | { |
12 | 12 | "cell_type": "code", |
13 | | - "execution_count": null, |
| 13 | + "execution_count": 1, |
14 | 14 | "id": "9c740a4a", |
15 | 15 | "metadata": {}, |
16 | | - "outputs": [], |
| 16 | + "outputs": [ |
| 17 | + { |
| 18 | + "name": "stdout", |
| 19 | + "output_type": "stream", |
| 20 | + "text": [ |
| 21 | + "Requirement already satisfied: poly-lithic in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (0.1.5.dev0)\n", |
| 22 | + "Requirement already satisfied: boto3>=1.34.65 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (1.34.65)\n", |
| 23 | + "Requirement already satisfied: colorlog>=6.8.2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (6.8.2)\n", |
| 24 | + "Requirement already satisfied: k2eg==0.2.7 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (0.2.7)\n", |
| 25 | + "Requirement already satisfied: keras>=3.1.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (3.1.1)\n", |
| 26 | + "Requirement already satisfied: mlflow>=2.12.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (2.12.1)\n", |
| 27 | + "Requirement already satisfied: numpy<2.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (1.26.4)\n", |
| 28 | + "Requirement already satisfied: p4p==4.2.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (4.2.0)\n", |
| 29 | + "Requirement already satisfied: pandas>=2.0.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (2.2.3)\n", |
| 30 | + "Requirement already satisfied: psutil>=6.0.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (7.0.0)\n", |
| 31 | + "Requirement already satisfied: psycopg2-binary in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (2.9.10)\n", |
| 32 | + "Requirement already satisfied: pyepics==3.5.7 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from poly-lithic) (3.5.7)\n", |
| 33 | + "Requirement already satisfied: shellingham in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (1.5.4)\n", |
| 34 | + "Requirement already satisfied: confluent-kafka in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (2.8.0)\n", |
| 35 | + "Requirement already satisfied: python-snappy in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (0.7.3)\n", |
| 36 | + "Requirement already satisfied: rich in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (13.9.4)\n", |
| 37 | + "Requirement already satisfied: msgpack in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (1.1.0)\n", |
| 38 | + "Requirement already satisfied: dynaconf in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (3.2.7)\n", |
| 39 | + "Requirement already satisfied: readerwriterlock in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (1.0.9)\n", |
| 40 | + "Requirement already satisfied: python-dotenv in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (1.0.1)\n", |
| 41 | + "Requirement already satisfied: click in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (8.1.8)\n", |
| 42 | + "Requirement already satisfied: click-loglevel in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (0.6.0)\n", |
| 43 | + "Requirement already satisfied: wheel in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (0.37.1)\n", |
| 44 | + "Requirement already satisfied: setuptools in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (59.6.0)\n", |
| 45 | + "Requirement already satisfied: click-repl in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from k2eg==0.2.7->poly-lithic) (0.3.0)\n", |
| 46 | + "Requirement already satisfied: epicscorelibs<7.0.7.99.2,>=7.0.7.99.1.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from p4p==4.2.0->poly-lithic) (7.0.7.99.1.2a1)\n", |
| 47 | + "Requirement already satisfied: pvxslibs<1.4.0a1,>=1.3.2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from p4p==4.2.0->poly-lithic) (1.3.3)\n", |
| 48 | + "Requirement already satisfied: nose2>=0.8.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from p4p==4.2.0->poly-lithic) (0.15.1)\n", |
| 49 | + "Requirement already satisfied: ply in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from p4p==4.2.0->poly-lithic) (3.11)\n", |
| 50 | + "Requirement already satisfied: pyparsing in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from pyepics==3.5.7->poly-lithic) (3.2.1)\n", |
| 51 | + "Requirement already satisfied: botocore<1.35.0,>=1.34.65 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from boto3>=1.34.65->poly-lithic) (1.34.162)\n", |
| 52 | + "Requirement already satisfied: jmespath<2.0.0,>=0.7.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from boto3>=1.34.65->poly-lithic) (1.0.1)\n", |
| 53 | + "Requirement already satisfied: s3transfer<0.11.0,>=0.10.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from boto3>=1.34.65->poly-lithic) (0.10.4)\n", |
| 54 | + "Requirement already satisfied: absl-py in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from keras>=3.1.1->poly-lithic) (2.1.0)\n", |
| 55 | + "Requirement already satisfied: namex in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from keras>=3.1.1->poly-lithic) (0.0.8)\n", |
| 56 | + "Requirement already satisfied: h5py in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from keras>=3.1.1->poly-lithic) (3.12.1)\n", |
| 57 | + "Requirement already satisfied: optree in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from keras>=3.1.1->poly-lithic) (0.14.0)\n", |
| 58 | + "Requirement already satisfied: ml-dtypes in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from keras>=3.1.1->poly-lithic) (0.3.2)\n", |
| 59 | + "Requirement already satisfied: Flask<4 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (3.1.0)\n", |
| 60 | + "Requirement already satisfied: alembic!=1.10.0,<2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (1.14.1)\n", |
| 61 | + "Requirement already satisfied: cloudpickle<4 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (3.1.1)\n", |
| 62 | + "Requirement already satisfied: docker<8,>=4.0.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (7.1.0)\n", |
| 63 | + "Requirement already satisfied: entrypoints<1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (0.4)\n", |
| 64 | + "Requirement already satisfied: gitpython<4,>=3.1.9 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (3.1.44)\n", |
| 65 | + "Requirement already satisfied: graphene<4 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (3.4.3)\n", |
| 66 | + "Requirement already satisfied: importlib-metadata!=4.7.0,<8,>=3.7.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (7.2.1)\n", |
| 67 | + "Requirement already satisfied: markdown<4,>=3.3 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (3.7)\n", |
| 68 | + "Requirement already satisfied: matplotlib<4 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (3.10.0)\n", |
| 69 | + "Requirement already satisfied: packaging<25 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (24.2)\n", |
| 70 | + "Requirement already satisfied: protobuf<6,>=3.12.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (4.25.6)\n", |
| 71 | + "Requirement already satisfied: pyarrow<16,>=4.0.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (15.0.2)\n", |
| 72 | + "Requirement already satisfied: pytz<2025 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (2024.2)\n", |
| 73 | + "Requirement already satisfied: pyyaml<7,>=5.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (6.0.2)\n", |
| 74 | + "Requirement already satisfied: querystring-parser<2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (1.2.4)\n", |
| 75 | + "Requirement already satisfied: requests<3,>=2.17.3 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (2.32.3)\n", |
| 76 | + "Requirement already satisfied: scikit-learn<2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (1.6.1)\n", |
| 77 | + "Requirement already satisfied: scipy<2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (1.15.1)\n", |
| 78 | + "Requirement already satisfied: sqlalchemy<3,>=1.4.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (2.0.38)\n", |
| 79 | + "Requirement already satisfied: sqlparse<1,>=0.4.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (0.5.3)\n", |
| 80 | + "Requirement already satisfied: Jinja2<4,>=2.11 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (3.1.5)\n", |
| 81 | + "Requirement already satisfied: gunicorn<22 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from mlflow>=2.12.1->poly-lithic) (21.2.0)\n", |
| 82 | + "Requirement already satisfied: python-dateutil>=2.8.2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from pandas>=2.0.1->poly-lithic) (2.9.0.post0)\n", |
| 83 | + "Requirement already satisfied: tzdata>=2022.7 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from pandas>=2.0.1->poly-lithic) (2025.1)\n", |
| 84 | + "Requirement already satisfied: Mako in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from alembic!=1.10.0,<2->mlflow>=2.12.1->poly-lithic) (1.3.9)\n", |
| 85 | + "Requirement already satisfied: typing-extensions>=4 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from alembic!=1.10.0,<2->mlflow>=2.12.1->poly-lithic) (4.12.2)\n", |
| 86 | + "Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from botocore<1.35.0,>=1.34.65->boto3>=1.34.65->poly-lithic) (2.3.0)\n", |
| 87 | + "Requirement already satisfied: setuptools-dso>=2.11a2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from epicscorelibs<7.0.7.99.2,>=7.0.7.99.1.1->p4p==4.2.0->poly-lithic) (2.11)\n", |
| 88 | + "Requirement already satisfied: Werkzeug>=3.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from Flask<4->mlflow>=2.12.1->poly-lithic) (3.1.3)\n", |
| 89 | + "Requirement already satisfied: itsdangerous>=2.2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from Flask<4->mlflow>=2.12.1->poly-lithic) (2.2.0)\n", |
| 90 | + "Requirement already satisfied: blinker>=1.9 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from Flask<4->mlflow>=2.12.1->poly-lithic) (1.9.0)\n", |
| 91 | + "Requirement already satisfied: gitdb<5,>=4.0.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from gitpython<4,>=3.1.9->mlflow>=2.12.1->poly-lithic) (4.0.12)\n", |
| 92 | + "Requirement already satisfied: graphql-core<3.3,>=3.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from graphene<4->mlflow>=2.12.1->poly-lithic) (3.2.6)\n", |
| 93 | + "Requirement already satisfied: graphql-relay<3.3,>=3.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from graphene<4->mlflow>=2.12.1->poly-lithic) (3.2.0)\n", |
| 94 | + "Requirement already satisfied: zipp>=0.5 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from importlib-metadata!=4.7.0,<8,>=3.7.0->mlflow>=2.12.1->poly-lithic) (3.21.0)\n", |
| 95 | + "Requirement already satisfied: MarkupSafe>=2.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from Jinja2<4,>=2.11->mlflow>=2.12.1->poly-lithic) (3.0.2)\n", |
| 96 | + "Requirement already satisfied: contourpy>=1.0.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from matplotlib<4->mlflow>=2.12.1->poly-lithic) (1.3.1)\n", |
| 97 | + "Requirement already satisfied: cycler>=0.10 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from matplotlib<4->mlflow>=2.12.1->poly-lithic) (0.12.1)\n", |
| 98 | + "Requirement already satisfied: fonttools>=4.22.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from matplotlib<4->mlflow>=2.12.1->poly-lithic) (4.56.0)\n", |
| 99 | + "Requirement already satisfied: kiwisolver>=1.3.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from matplotlib<4->mlflow>=2.12.1->poly-lithic) (1.4.8)\n", |
| 100 | + "Requirement already satisfied: pillow>=8 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from matplotlib<4->mlflow>=2.12.1->poly-lithic) (11.1.0)\n", |
| 101 | + "Requirement already satisfied: six>=1.5 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from python-dateutil>=2.8.2->pandas>=2.0.1->poly-lithic) (1.17.0)\n", |
| 102 | + "Requirement already satisfied: charset-normalizer<4,>=2 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from requests<3,>=2.17.3->mlflow>=2.12.1->poly-lithic) (3.4.1)\n", |
| 103 | + "Requirement already satisfied: idna<4,>=2.5 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from requests<3,>=2.17.3->mlflow>=2.12.1->poly-lithic) (3.10)\n", |
| 104 | + "Requirement already satisfied: certifi>=2017.4.17 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from requests<3,>=2.17.3->mlflow>=2.12.1->poly-lithic) (2025.1.31)\n", |
| 105 | + "Requirement already satisfied: joblib>=1.2.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from scikit-learn<2->mlflow>=2.12.1->poly-lithic) (1.4.2)\n", |
| 106 | + "Requirement already satisfied: threadpoolctl>=3.1.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from scikit-learn<2->mlflow>=2.12.1->poly-lithic) (3.5.0)\n", |
| 107 | + "Requirement already satisfied: greenlet!=0.4.17 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from sqlalchemy<3,>=1.4.0->mlflow>=2.12.1->poly-lithic) (3.1.1)\n", |
| 108 | + "Requirement already satisfied: prompt-toolkit>=3.0.36 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from click-repl->k2eg==0.2.7->poly-lithic) (3.0.50)\n", |
| 109 | + "Requirement already satisfied: cramjam in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from python-snappy->k2eg==0.2.7->poly-lithic) (2.9.1)\n", |
| 110 | + "Requirement already satisfied: markdown-it-py>=2.2.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from rich->k2eg==0.2.7->poly-lithic) (3.0.0)\n", |
| 111 | + "Requirement already satisfied: pygments<3.0.0,>=2.13.0 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from rich->k2eg==0.2.7->poly-lithic) (2.19.1)\n", |
| 112 | + "Requirement already satisfied: smmap<6,>=3.0.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from gitdb<5,>=4.0.1->gitpython<4,>=3.1.9->mlflow>=2.12.1->poly-lithic) (5.0.2)\n", |
| 113 | + "Requirement already satisfied: mdurl~=0.1 in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from markdown-it-py>=2.2.0->rich->k2eg==0.2.7->poly-lithic) (0.1.2)\n", |
| 114 | + "Requirement already satisfied: wcwidth in /home/gbm96348/nfs_home/ml_env/lib/python3.11/site-packages (from prompt-toolkit>=3.0.36->click-repl->k2eg==0.2.7->poly-lithic) (0.2.13)\n", |
| 115 | + "\n", |
| 116 | + "\u001b[1m[\u001b[0m\u001b[34;49mnotice\u001b[0m\u001b[1;39;49m]\u001b[0m\u001b[39;49m A new release of pip is available: \u001b[0m\u001b[31;49m25.0.1\u001b[0m\u001b[39;49m -> \u001b[0m\u001b[32;49m25.1.1\u001b[0m\n", |
| 117 | + "\u001b[1m[\u001b[0m\u001b[34;49mnotice\u001b[0m\u001b[1;39;49m]\u001b[0m\u001b[39;49m To update, run: \u001b[0m\u001b[32;49mpip install --upgrade pip\u001b[0m\n" |
| 118 | + ] |
| 119 | + } |
| 120 | + ], |
17 | 121 | "source": [ |
18 | 122 | "# setup \n", |
19 | 123 | "!pip install poly-lithic" |
|
569 | 673 | "name": "python", |
570 | 674 | "nbconvert_exporter": "python", |
571 | 675 | "pygments_lexer": "ipython3", |
572 | | - "version": "3.11.0" |
| 676 | + "version": "3.11.0rc1" |
573 | 677 | } |
574 | 678 | }, |
575 | 679 | "nbformat": 4, |
|
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