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Merge pull request #280 from MPAS-Dev/dependabot/github_actions/actio… #155

Merge pull request #280 from MPAS-Dev/dependabot/github_actions/actio…

Merge pull request #280 from MPAS-Dev/dependabot/github_actions/actio… #155

name: CI/CD Build Workflow
on:
push:
branches:
- main
pull_request:
branches:
- main
workflow_dispatch:
env:
CANCEL_OTHERS: false
PATHS_IGNORE: '["**/README.md", "**/docs/**"]'
# Static python version for setting up pre-commit linting
PYTHON_VERSION: "3.14"
jobs:
pre-commit-hooks:
name: lint with pre-commit
runs-on: ubuntu-latest
timeout-minutes: 5
steps:
- id: skip_check
uses: fkirc/skip-duplicate-actions@master
with:
cancel_others: ${{ env.CANCEL_OTHERS }}
paths_ignore: ${{ env.PATHS_IGNORE }}
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
name: Checkout Code Repository
uses: actions/checkout@v6
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
name: Set up Python ${{ env.PYTHON_VERSION }}
uses: actions/setup-python@v6
with:
python-version: ${{ env.PYTHON_VERSION }}
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
id: file_changes
uses: trilom/[email protected]
with:
output: ' '
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
# Run all pre-commit hooks on all the files.
# Getting only staged files can be tricky in case a new PR is opened
# since the action is run on a branch in detached head state
name: Install and Run Pre-commit
uses: pre-commit/[email protected]
with:
extra_args: --files ${{ steps.file_changes.outputs.files}}
build:
name: test geometric_features - python ${{ matrix.python-version }}
runs-on: ubuntu-latest
timeout-minutes: 20
defaults:
run:
shell: bash -l {0}
strategy:
matrix:
python-version: ["3.10", "3.11", "3.12", "3.13", "3.14"]
fail-fast: false
steps:
- id: skip_check
uses: fkirc/skip-duplicate-actions@master
with:
cancel_others: ${{ env.CANCEL_OTHERS }}
paths_ignore: ${{ env.PATHS_IGNORE }}
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
uses: actions/checkout@v6
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
name: Cache Conda
uses: actions/cache@v5
env:
# Increase this value to reset cache if conda-dev-spec.template has not changed in the workflow
CACHE_NUMBER: 0
with:
path: ~/conda_pkgs_dir_py${{ matrix.python-version }}
key:
${{ runner.os }}-${{ matrix.python-version }}-conda-${{ env.CACHE_NUMBER }}-${{
hashFiles('dev-spec.txt,pyproject.toml') }}
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
name: Set up Conda Environment
uses: mamba-org/setup-micromamba@v2
with:
environment-name: geometric_features_dev
init-shell: bash
condarc: |
channel_priority: strict
channels:
- conda-forge
create-args: >-
python=${{ matrix.python-version }}
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
name: Install geometric_features
run: |
conda install -y --file dev-spec.txt python=${{ matrix.python-version }}
python -m pip install --no-deps --no-build-isolation -vv -e .
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
name: Run Tests
env:
CHECK_IMAGES: False
run: |
set -e
pip check
pytest --pyargs geometric_features
combine_features -v
difference_features -v
fix_features_at_antimeridian -v
merge_features -v
plot_features -v
set_group_name -v
simplify_features -v
split_features -v
tag_features -v
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
name: Build Sphinx Docs
run: |
cd docs
DOCS_VERSION=test make versioned-html