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[Update] : replace readRDS(inputPathSpecies) with ecodata object #58

@andybeet

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@andybeet

We have several functions in data-raw and R folders that use an argument inputPathSpecies or equivalent that reads in an rds file that should be identical to ecodata::species_groupings. The rds file has "drifted" away from the ecodata object slightly. There is no need to have this additional file being read in when we can just use the ecodata object. I recommend after the 2026 cycle we update the following indicator workflows

  • aggregate_biomass
  • bennet
  • comdat
  • condition
  • mass_inshore_survey
  • species_dist
  • productivity_anomaly

Note: Recent changes in ecodata::species_groupings involve fixing incorrect values in the Jurisdiction field

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