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remove smiles
1 parent c7c7f67 commit 088ceb2

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-3
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2 files changed

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app/callbacks.py

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@@ -128,7 +128,6 @@ def process_bgc_class(bgc_class: tuple[str, ...] | None) -> list[str]:
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"# BGCs": len(gcf.bgcs),
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"BGC Classes": [bgc_to_class[bgc.id] for bgc in gcf.bgcs],
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"BGC IDs": list(bgc_ids),
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"BGC smiles": list(bgc_smiles),
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"strains": strains,
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}
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)

tests/test_callbacks.py

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@@ -50,15 +50,13 @@ def sample_processed_data():
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["NRPS"],
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],
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"BGC IDs": ["BGC_1", "BGC_2", "BGC_3"],
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"BGC smiles": ["CCO", "CCN", "N/A"],
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"strains": ["Strain_1", "Strain_2", "Strain_3"],
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},
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{
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"GCF ID": "GCF_2",
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"# BGCs": 2,
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"BGC Classes": [["RiPP"], ["Terpene"]],
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"BGC IDs": ["BGC_1", "BGC_3"],
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"BGC smiles": ["CCO", "N/A"],
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"strains": ["Strain_3"],
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},
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]

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