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Merge pull request #259 from NeuroML/development
To 1.1.2
2 parents b365cd3 + c33a5f1 commit e49d725

17 files changed

+99
-68
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man/man1/pynml-archive.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-ARCHIVE "1" "August 2023" "pynml-archive v1.0.10" "User Commands"
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.TH PYNML-ARCHIVE "1" "September 2023" "pynml-archive v1.1.2" "User Commands"
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.SH NAME
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pynml-archive \- manual page for pynml-archive v1.0.10
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pynml-archive \- manual page for pynml-archive v1.1.2
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.SH DESCRIPTION
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usage: pynml\-archive [\-h] [\-zipfileName <zip file name>]
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Explicit list of files to create archive of.
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-channelanalysis.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-CHANNELANALYSIS "1" "August 2023" "pynml-channelanalysis v1.0.10" "User Commands"
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.TH PYNML-CHANNELANALYSIS "1" "September 2023" "pynml-channelanalysis v1.1.2" "User Commands"
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.SH NAME
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pynml-channelanalysis \- manual page for pynml-channelanalysis v1.0.10
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pynml-channelanalysis \- manual page for pynml-channelanalysis v1.1.2
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.SH DESCRIPTION
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usage: pynml\-channelanalysis [\-h] [\-v] [\-minV <min v>] [\-maxV <max v>]
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plot current vs voltage for ion channel
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-channelml2nml.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-CHANNELML2NML "1" "August 2023" "pynml-channelml2nml v1.0.10" "User Commands"
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.TH PYNML-CHANNELML2NML "1" "September 2023" "pynml-channelml2nml v1.1.2" "User Commands"
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.SH NAME
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pynml-channelml2nml \- manual page for pynml-channelml2nml v1.0.10
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pynml-channelml2nml \- manual page for pynml-channelml2nml v1.1.2
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.SH DESCRIPTION
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usage: pynml\-channelml2nml [\-h] [\-xsltfile <XSLT file>]
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Name of the outputfile file
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-modchananalysis.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-MODCHANANALYSIS "1" "August 2023" "pynml-modchananalysis v1.0.10" "User Commands"
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.TH PYNML-MODCHANANALYSIS "1" "September 2023" "pynml-modchananalysis v1.1.2" "User Commands"
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.SH NAME
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pynml-modchananalysis \- manual page for pynml-modchananalysis v1.0.10
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pynml-modchananalysis \- manual page for pynml-modchananalysis v1.1.2
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.SH DESCRIPTION
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usage: pynml\-modchananalysis [\-h] [\-v] [\-nogui] [\-minV <min v>]
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Name of the mod file containing the channel
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-plotchan.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-PLOTCHAN "1" "August 2023" "pynml-plotchan v1.0.10" "User Commands"
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.TH PYNML-PLOTCHAN "1" "September 2023" "pynml-plotchan v1.1.2" "User Commands"
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.SH NAME
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pynml-plotchan \- manual page for pynml-plotchan v1.0.10
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pynml-plotchan \- manual page for pynml-plotchan v1.1.2
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.SH DESCRIPTION
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usage: pynml\-plotchan [\-h] [\-noDistancePlots] [\-nogui]
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Do not show plots as they are generated
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-plotmorph.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-PLOTMORPH "1" "August 2023" "pynml-plotmorph v1.0.10" "User Commands"
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.TH PYNML-PLOTMORPH "1" "September 2023" "pynml-plotmorph v1.1.2" "User Commands"
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.SH NAME
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pynml-plotmorph \- manual page for pynml-plotmorph v1.0.10
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pynml-plotmorph \- manual page for pynml-plotmorph v1.1.2
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.SH DESCRIPTION
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usage: pynml\-plotmorph [\-h] [\-v] [\-nogui] [\-plane2d <plane, e.g. xy, yz, zx>]
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[\-plotType <type: detailed, constant, or schematic>]
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[\-pointFraction <fraction of each population to plot as point cells>]
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[\-plotType <type: detailed, constant, schematic, or point>]
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[\-theme <theme: light, dark>]
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[\-minWidth <min width of lines>] [\-interactive3d]
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[\-saveToFile <Image file name>] [\-square]
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\fB\-plane2d\fR <plane, e.g. xy, yz, zx>
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Plane to plot on for 2D plot
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\fB\-plotType\fR <type: detailed, constant, or schematic>
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\fB\-pointFraction\fR <fraction of each population to plot as point cells>
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Fraction of network to plot as point cells
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.TP
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\fB\-plotType\fR <type: detailed, constant, schematic, or point>
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Level of detail to plot in
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\fB\-theme\fR <theme: light, dark>
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2D plot
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-plotspikes.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-PLOTSPIKES "1" "August 2023" "pynml-plotspikes v1.0.10" "User Commands"
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.TH PYNML-PLOTSPIKES "1" "September 2023" "pynml-plotspikes v1.1.2" "User Commands"
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.SH NAME
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pynml-plotspikes \- manual page for pynml-plotspikes v1.0.10
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pynml-plotspikes \- manual page for pynml-plotspikes v1.1.2
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.SH DESCRIPTION
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usage: pynml\-plotspikes [\-h] [\-format <format>] [\-rates] [\-showPlotsAlready]
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Number of bins for rate histogram
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-povray.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-POVRAY "1" "August 2023" "pynml-povray v1.0.10" "User Commands"
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.TH PYNML-POVRAY "1" "September 2023" "pynml-povray v1.1.2" "User Commands"
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.SH NAME
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pynml-povray \- manual page for pynml-povray v1.0.10
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pynml-povray \- manual page for pynml-povray v1.1.2
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.SH DESCRIPTION
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usage: pynml\-povray [\-h] [\-split] [\-background <background colour>] [\-movie]
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Show segment ids
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-sonata.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-SONATA "1" "August 2023" "pynml-sonata v1.0.10" "User Commands"
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.TH PYNML-SONATA "1" "September 2023" "pynml-sonata v1.1.2" "User Commands"
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.SH NAME
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pynml-sonata \- manual page for pynml-sonata v1.0.10
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pynml-sonata \- manual page for pynml-sonata v1.1.2
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.SH DESCRIPTION
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usage: pynml\-sonata [\-h] [\-h5] [\-jnml] [\-neuron]
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jNeuroML_NEURON
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

man/man1/pynml-summary.1

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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3.
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.TH PYNML-SUMMARY "1" "August 2023" "pynml-summary v1.0.10" "User Commands"
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.TH PYNML-SUMMARY "1" "September 2023" "pynml-summary v1.1.2" "User Commands"
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.SH NAME
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pynml-summary \- manual page for pynml-summary v1.0.10
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pynml-summary \- manual page for pynml-summary v1.1.2
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.SH DESCRIPTION
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Usage:
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print this help text and exit
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.SH ENVIRONMENT
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.PP
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pyNeuroML v1.0.10 (libNeuroML v0.5.3, jNeuroML v0.12.2)
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pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
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.SH "SEE ALSO"
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.BR pynml (1),
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.BR pynml-channelanalysis (1),

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