From e5cf334eb81ab450e8cd08ac10220eda25d07658 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Fri, 9 Sep 2022 10:08:51 -0400 Subject: [PATCH 01/86] Update README to explain new vs. old viewer repos --- README.md | 51 +++++++-------------------------------------------- 1 file changed, 7 insertions(+), 44 deletions(-) diff --git a/README.md b/README.md index fc63c97f0..092192107 100644 --- a/README.md +++ b/README.md @@ -1,16 +1,16 @@ -opentree -======== +webapp-tree-viewer +================== -This is the repository for the Open Tree of Life web applications, one of many subsystems making up the Open Tree of Life project code. +This is the repository for the Open Tree of Life synthetic-tree viewer, one of many subsystems making up the Open Tree of Life project code. Previously, this was bundled in a common repo with the study-curation app, but we're breaking these apart as part of our conversion from web2py to Pyramid. -For Open Tree of Life documentation, see [the germinator repository's wiki](https://github.com/OpenTreeOfLife/germinator/wiki). The 'deployment system' and web API documentation sources that formerly resided in this repository now live in the [germinator repository](https://github.com/OpenTreeOfLife/germinator). +For Open Tree of Life documentation, see [the germinator repository's wiki](https://github.com/OpenTreeOfLife/germinator/wiki). The following instructions have not been reviewed in a long time. For local installation a better place to start might be [this wiki page](https://github.com/OpenTreeOfLife/opentree/wiki/Installing-a-local-curator-and-tree-browser-test-server). Installation ============ -See the phylografter instructions for -more details about using web2py. + +**TBD - pending changes in converting from web2py to the Pyramid framework.** We strongly recommend using a virtual environment to manage the version of Python and installed modules. We're currently running opentree with Python @@ -136,44 +136,7 @@ http://www.web2py.com/examples/default/download MTH used version 2.4.2 of web2py Subdirectories -------------- -mockup -: JAR's hand-written html that mock up the design of the site. - -smasher -: construction of synthetic taxonomy. See https://github.com/OpenTreeOfLife/opentree/wiki/Open-Tree-Taxonomy for details - -webapp/controllers -: python code executed by web2py when a URL is successfully mapped to a controller. - -webapp/modules -: python code that can be imported and used by the webpp, but is not exposed as controller - -webapp/models -: code that describes the database structure used by the web app - -webapp/views -: templates for the page content that is rendered in response to a query. The view is typically specific to a few controllers in the web app - -webapp/static -: static content to be returned by the web app. Contains css, images and js subdirectories for commonly used items. - -webapp/private -: the location to be used for storing installation-specific configuration information. - -webapp/cron -: directory that stores commands to be executed periodically by the web2py framework when the app is running. - -webapp/databases -: the location of the database files used by web2py. - -webapp/languages -: web2py code for internationalization - -webapp/cache, webapp/databases, webapp/errors, webapp/sessions, webapp/uploads -: directories used by web2py to store content associated with user's activities. Content here should not need to be committed to version control. - -curator/* -: similar subdirectories to those in webapp/* above +**TBD - pending changes in converting from web2py to the Pyramid framework.** Acknowledgements ---------------- From 586a3aa0e7145fe7e216285d376844f20c957ffc Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Fri, 9 Sep 2022 14:28:31 -0400 Subject: [PATCH 02/86] Updated requirements files and tracking As usual, we capture high-level intent in requirements.in, then freeze the as-built versions in requirements.txt. See pipdeptree.out for a full explanation of module dependencies. --- .gitignore | 1 + pipdeptree.out | 51 ++++++++++++++++++++++++++++++++++++++++++++++++ requirements.in | 9 +++++++++ requirements.txt | 40 ++++++++++++++++++++++++++++++++++--- 4 files changed, 98 insertions(+), 3 deletions(-) create mode 100644 pipdeptree.out create mode 100644 requirements.in diff --git a/.gitignore b/.gitignore index c4b9d2495..45dd4bdf5 100644 --- a/.gitignore +++ b/.gitignore @@ -4,6 +4,7 @@ *.class tmp *.tmp +venv/ backup/ smasher/tax/gbif smasher/tax/ncbi diff --git a/pipdeptree.out b/pipdeptree.out new file mode 100644 index 000000000..2d8cd5118 --- /dev/null +++ b/pipdeptree.out @@ -0,0 +1,51 @@ +bleach==5.0.1 + - six [required: >=1.9.0, installed: 1.16.0] + - webencodings [required: Any, installed: 0.5.1] +cookiecutter==2.1.1 + - binaryornot [required: >=0.4.4, installed: 0.4.4] + - chardet [required: >=3.0.2, installed: 5.0.0] + - click [required: >=7.0,<9.0.0, installed: 8.1.3] + - Jinja2 [required: >=2.7,<4.0.0, installed: 3.1.2] + - MarkupSafe [required: >=2.0, installed: 2.1.1] + - jinja2-time [required: >=0.2.0, installed: 0.2.0] + - arrow [required: Any, installed: 0.15.8] + - python-dateutil [required: Any, installed: 2.2] + - six [required: Any, installed: 1.16.0] + - jinja2 [required: Any, installed: 3.1.2] + - MarkupSafe [required: >=2.0, installed: 2.1.1] + - python-slugify [required: >=4.0.0, installed: 6.1.2] + - text-unidecode [required: >=1.3, installed: 1.3] + - pyyaml [required: >=5.3.1, installed: 6.0] + - requests [required: >=2.23.0, installed: 2.28.1] + - certifi [required: >=2017.4.17, installed: 2022.6.15.1] + - charset-normalizer [required: >=2,<3, installed: 2.1.1] + - idna [required: >=2.5,<4, installed: 3.3] + - urllib3 [required: >=1.21.1,<1.27, installed: 1.26.12] +locket==0.1.1 +pip==22.2.2 +pipdeptree==2.3.1 +pyramid==2.0 + - hupper [required: >=1.5, installed: 1.10.3] + - plaster [required: Any, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - plaster-pastedeploy [required: Any, installed: 0.7] + - PasteDeploy [required: >=2.0, installed: 2.1.1] + - setuptools [required: Any, installed: 60.10.0] + - plaster [required: >=0.5, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - setuptools [required: Any, installed: 60.10.0] + - translationstring [required: >=0.4, installed: 1.4] + - venusian [required: >=1.0, installed: 3.0.0] + - webob [required: >=1.8.3, installed: 1.8.7] + - zope.deprecation [required: >=3.5.0, installed: 4.4.0] + - setuptools [required: Any, installed: 60.10.0] + - zope.interface [required: >=3.8.0, installed: 5.4.0] + - setuptools [required: Any, installed: 60.10.0] +python-jwt==3.3.0 + - jwcrypto [required: >=0.8, installed: 0.9.1] + - cryptography [required: >=2.3, installed: 38.0.1] + - cffi [required: >=1.12, installed: 1.15.1] + - pycparser [required: Any, installed: 2.21] + - deprecated [required: Any, installed: 1.2.13] + - wrapt [required: >=1.10,<2, installed: 1.14.1] + - six [required: Any, installed: 1.16.0] diff --git a/requirements.in b/requirements.in new file mode 100644 index 000000000..e0f0eded7 --- /dev/null +++ b/requirements.in @@ -0,0 +1,9 @@ +requests +python-dateutil==2.2 +locket==0.1.1 +bleach +jwcrypto==0.9.1 +python_jwt +pyramid==2.0 +pipdeptree +cookiecutter diff --git a/requirements.txt b/requirements.txt index 23a83451d..151617506 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,6 +1,40 @@ -requests +requests==2.28.1 python-dateutil==2.2 locket==0.1.1 -bleach +bleach==5.0.1 jwcrypto==0.9.1 -python_jwt +python-jwt==3.3.0 +pyramid==2.0 +pipdeptree==2.3.1 +cookiecutter==2.1.1 +## The following requirements were added by pip freeze: +arrow==0.15.8 +binaryornot==0.4.4 +certifi==2022.6.15.1 +cffi==1.15.1 +chardet==5.0.0 +charset-normalizer==2.1.1 +click==8.1.3 +cryptography==38.0.1 +Deprecated==1.2.13 +hupper==1.10.3 +idna==3.3 +Jinja2==3.1.2 +jinja2-time==0.2.0 +MarkupSafe==2.1.1 +PasteDeploy==2.1.1 +plaster==1.0 +plaster-pastedeploy==0.7 +pycparser==2.21 +python-slugify==6.1.2 +PyYAML==6.0 +six==1.16.0 +text-unidecode==1.3 +translationstring==1.4 +urllib3==1.26.12 +venusian==3.0.0 +webencodings==0.5.1 +WebOb==1.8.7 +wrapt==1.14.1 +zope.deprecation==4.4.0 +zope.interface==5.4.0 From 442c0acc1a2121e468083babf6b369a711a10afe Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Fri, 9 Sep 2022 14:36:01 -0400 Subject: [PATCH 03/86] Update pip-installation instructions in README --- README.md | 17 +++++++++++++++++ 1 file changed, 17 insertions(+) diff --git a/README.md b/README.md index 092192107..ff6084631 100644 --- a/README.md +++ b/README.md @@ -36,8 +36,25 @@ The included **requirements.txt** file lists known-good versions of all the requ python modules for opentree, plus a few convenience modules. To [install these modules using pip](http://www.pip-installer.org/en/latest/cookbook.html#requirements-files), +The file **requirements.in** captures our intentions, typically following the +latest version of each module unless frozen to address bugs or incompatibilities. + 
+# create a python3 venv inside the top-level folder
+cd ~/repos/webapp-tree-viewer
+export VENV="$(pwd)/venv"
+python3 -m venv $VENV
+
+# install the pinned set of known-good modules
 pip install -r requirements.txt
+
+# OR during development, try to update these using `requirements.in`
+pip install -r requirements.in
+
+# capture the resulting versions for production deploymentsl
+$VENV/bin/pip freeze -r requirements.in > requirements.txt
+# capture and save the full dependency tree for all modules
+$VENV/bin/pipdeptree > pipdeptree.out
The contents of the webapp subdirectory are a web2py application. Make a symbolic From 645ded743b6b5c0660c2eaa0b92c4f9b7e839fe2 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Fri, 9 Sep 2022 14:43:45 -0400 Subject: [PATCH 04/86] Initial Pyramid project from cookiecutter --- synthetic_tree_viewer/.coveragerc | 2 + synthetic_tree_viewer/.gitignore | 22 +++ synthetic_tree_viewer/CHANGES.txt | 4 + synthetic_tree_viewer/MANIFEST.in | 5 + synthetic_tree_viewer/README.txt | 30 ++++ synthetic_tree_viewer/development.ini | 59 +++++++ synthetic_tree_viewer/production.ini | 53 ++++++ synthetic_tree_viewer/pytest.ini | 6 + synthetic_tree_viewer/setup.py | 52 ++++++ .../synthetic_tree_viewer/__init__.py | 11 ++ .../synthetic_tree_viewer/routes.py | 3 + .../static/pyramid-16x16.png | Bin 0 -> 1319 bytes .../synthetic_tree_viewer/static/pyramid.png | Bin 0 -> 12901 bytes .../synthetic_tree_viewer/static/theme.css | 157 ++++++++++++++++++ .../templates/404.jinja2 | 8 + .../templates/layout.jinja2 | 64 +++++++ .../templates/mytemplate.jinja2 | 8 + .../synthetic_tree_viewer/views/__init__.py | 0 .../synthetic_tree_viewer/views/default.py | 6 + .../synthetic_tree_viewer/views/notfound.py | 7 + synthetic_tree_viewer/testing.ini | 53 ++++++ synthetic_tree_viewer/tests/__init__.py | 0 synthetic_tree_viewer/tests/conftest.py | 76 +++++++++ .../tests/test_functional.py | 7 + synthetic_tree_viewer/tests/test_views.py | 13 ++ 25 files changed, 646 insertions(+) create mode 100644 synthetic_tree_viewer/.coveragerc create mode 100644 synthetic_tree_viewer/.gitignore create mode 100644 synthetic_tree_viewer/CHANGES.txt create mode 100644 synthetic_tree_viewer/MANIFEST.in create mode 100644 synthetic_tree_viewer/README.txt create mode 100644 synthetic_tree_viewer/development.ini create mode 100644 synthetic_tree_viewer/production.ini create mode 100644 synthetic_tree_viewer/pytest.ini create mode 100644 synthetic_tree_viewer/setup.py create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/__init__.py create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/routes.py create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid-16x16.png create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid.png create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/theme.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/404.jinja2 create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/mytemplate.jinja2 create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/views/__init__.py create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/views/default.py create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/views/notfound.py create mode 100644 synthetic_tree_viewer/testing.ini create mode 100644 synthetic_tree_viewer/tests/__init__.py create mode 100644 synthetic_tree_viewer/tests/conftest.py create mode 100644 synthetic_tree_viewer/tests/test_functional.py create mode 100644 synthetic_tree_viewer/tests/test_views.py diff --git a/synthetic_tree_viewer/.coveragerc b/synthetic_tree_viewer/.coveragerc new file mode 100644 index 000000000..1264262d8 --- /dev/null +++ b/synthetic_tree_viewer/.coveragerc @@ -0,0 +1,2 @@ +[run] +source = synthetic_tree_viewer diff --git a/synthetic_tree_viewer/.gitignore b/synthetic_tree_viewer/.gitignore new file mode 100644 index 000000000..e9336274d --- /dev/null +++ b/synthetic_tree_viewer/.gitignore @@ -0,0 +1,22 @@ +*.egg +*.egg-info +*.pyc +*$py.class +*~ +.coverage +coverage.xml +build/ +dist/ +.tox/ +nosetests.xml +env*/ +tmp/ +Data*.fs* +*.sublime-project +*.sublime-workspace +.*.sw? +.sw? +.DS_Store +coverage +test +*.sqlite diff --git a/synthetic_tree_viewer/CHANGES.txt b/synthetic_tree_viewer/CHANGES.txt new file mode 100644 index 000000000..14b902fd1 --- /dev/null +++ b/synthetic_tree_viewer/CHANGES.txt @@ -0,0 +1,4 @@ +0.0 +--- + +- Initial version. diff --git a/synthetic_tree_viewer/MANIFEST.in b/synthetic_tree_viewer/MANIFEST.in new file mode 100644 index 000000000..aab2b6b3f --- /dev/null +++ b/synthetic_tree_viewer/MANIFEST.in @@ -0,0 +1,5 @@ +include *.txt *.ini *.cfg *.rst +recursive-include synthetic_tree_viewer *.ico *.png *.css *.gif *.jpg *.pt *.txt *.mak *.mako *.js *.html *.xml *.jinja2 +recursive-include tests * +recursive-exclude * __pycache__ +recursive-exclude * *.py[co] diff --git a/synthetic_tree_viewer/README.txt b/synthetic_tree_viewer/README.txt new file mode 100644 index 000000000..9cff8cef3 --- /dev/null +++ b/synthetic_tree_viewer/README.txt @@ -0,0 +1,30 @@ +synthetic tree viewer +===================== + +Getting Started +--------------- + +- Change directory into your newly created project if not already there. Your + current directory should be the same as this README.txt file and setup.py. + + cd synthetic_tree_viewer + +- Create a Python virtual environment, if not already created. + + python3 -m venv env + +- Upgrade packaging tools, if necessary. + + env/bin/pip install --upgrade pip setuptools + +- Install the project in editable mode with its testing requirements. + + env/bin/pip install -e ".[testing]" + +- Run your project's tests. + + env/bin/pytest + +- Run your project. + + env/bin/pserve development.ini diff --git a/synthetic_tree_viewer/development.ini b/synthetic_tree_viewer/development.ini new file mode 100644 index 000000000..0eae8fdbc --- /dev/null +++ b/synthetic_tree_viewer/development.ini @@ -0,0 +1,59 @@ +### +# app configuration +# https://docs.pylonsproject.org/projects/pyramid/en/latest/narr/environment.html +### + +[app:main] +use = egg:synthetic_tree_viewer + +pyramid.reload_templates = true +pyramid.debug_authorization = false +pyramid.debug_notfound = false +pyramid.debug_routematch = false +pyramid.default_locale_name = en +pyramid.includes = + pyramid_debugtoolbar + +# By default, the toolbar only appears for clients from IP addresses +# '127.0.0.1' and '::1'. +# debugtoolbar.hosts = 127.0.0.1 ::1 + +### +# wsgi server configuration +### + +[server:main] +use = egg:waitress#main +listen = localhost:6543 + +### +# logging configuration +# https://docs.pylonsproject.org/projects/pyramid/en/latest/narr/logging.html +### + +[loggers] +keys = root, synthetic_tree_viewer + +[handlers] +keys = console + +[formatters] +keys = generic + +[logger_root] +level = INFO +handlers = console + +[logger_synthetic_tree_viewer] +level = DEBUG +handlers = +qualname = synthetic_tree_viewer + +[handler_console] +class = StreamHandler +args = (sys.stderr,) +level = NOTSET +formatter = generic + +[formatter_generic] +format = %(asctime)s %(levelname)-5.5s [%(name)s:%(lineno)s][%(threadName)s] %(message)s diff --git a/synthetic_tree_viewer/production.ini b/synthetic_tree_viewer/production.ini new file mode 100644 index 000000000..8ef436853 --- /dev/null +++ b/synthetic_tree_viewer/production.ini @@ -0,0 +1,53 @@ +### +# app configuration +# https://docs.pylonsproject.org/projects/pyramid/en/latest/narr/environment.html +### + +[app:main] +use = egg:synthetic_tree_viewer + +pyramid.reload_templates = false +pyramid.debug_authorization = false +pyramid.debug_notfound = false +pyramid.debug_routematch = false +pyramid.default_locale_name = en + +### +# wsgi server configuration +### + +[server:main] +use = egg:waitress#main +listen = *:6543 + +### +# logging configuration +# https://docs.pylonsproject.org/projects/pyramid/en/latest/narr/logging.html +### + +[loggers] +keys = root, synthetic_tree_viewer + +[handlers] +keys = console + +[formatters] +keys = generic + +[logger_root] +level = WARN +handlers = console + +[logger_synthetic_tree_viewer] +level = WARN +handlers = +qualname = synthetic_tree_viewer + +[handler_console] +class = StreamHandler +args = (sys.stderr,) +level = NOTSET +formatter = generic + +[formatter_generic] +format = %(asctime)s %(levelname)-5.5s [%(name)s:%(lineno)s][%(threadName)s] %(message)s diff --git a/synthetic_tree_viewer/pytest.ini b/synthetic_tree_viewer/pytest.ini new file mode 100644 index 000000000..3cdbb5dc3 --- /dev/null +++ b/synthetic_tree_viewer/pytest.ini @@ -0,0 +1,6 @@ +[pytest] +addopts = --strict-markers + +testpaths = + synthetic_tree_viewer + tests diff --git a/synthetic_tree_viewer/setup.py b/synthetic_tree_viewer/setup.py new file mode 100644 index 000000000..486345e3e --- /dev/null +++ b/synthetic_tree_viewer/setup.py @@ -0,0 +1,52 @@ +import os + +from setuptools import setup, find_packages + +here = os.path.abspath(os.path.dirname(__file__)) +with open(os.path.join(here, 'README.txt')) as f: + README = f.read() +with open(os.path.join(here, 'CHANGES.txt')) as f: + CHANGES = f.read() + +requires = [ + 'plaster_pastedeploy', + 'pyramid', + 'pyramid_jinja2', + 'pyramid_debugtoolbar', + 'waitress', +] + +tests_require = [ + 'WebTest', + 'pytest', + 'pytest-cov', +] + +setup( + name='synthetic_tree_viewer', + version='0.0', + description='synthetic tree viewer', + long_description=README + '\n\n' + CHANGES, + classifiers=[ + 'Programming Language :: Python', + 'Framework :: Pyramid', + 'Topic :: Internet :: WWW/HTTP', + 'Topic :: Internet :: WWW/HTTP :: WSGI :: Application', + ], + author='', + author_email='', + url='', + keywords='web pyramid pylons', + packages=find_packages(exclude=['tests']), + include_package_data=True, + zip_safe=False, + extras_require={ + 'testing': tests_require, + }, + install_requires=requires, + entry_points={ + 'paste.app_factory': [ + 'main = synthetic_tree_viewer:main', + ], + }, +) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/__init__.py b/synthetic_tree_viewer/synthetic_tree_viewer/__init__.py new file mode 100644 index 000000000..a3d5a6469 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/__init__.py @@ -0,0 +1,11 @@ +from pyramid.config import Configurator + + +def main(global_config, **settings): + """ This function returns a Pyramid WSGI application. + """ + with Configurator(settings=settings) as config: + config.include('pyramid_jinja2') + config.include('.routes') + config.scan() + return config.make_wsgi_app() diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/routes.py b/synthetic_tree_viewer/synthetic_tree_viewer/routes.py new file mode 100644 index 000000000..25504ad4d --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/routes.py @@ -0,0 +1,3 @@ +def includeme(config): + config.add_static_view('static', 'static', cache_max_age=3600) + config.add_route('home', '/') diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid-16x16.png b/synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid-16x16.png new file mode 100644 index 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zmJs7q`ZtUjtlKHFFz4p;aWhHjF6Um@rktsn?oI1D*-Hd!(Df5N>jAUh#W*oc<&Bi7 zHo%dei>%VPt3hk6MxNi_Es7TtGMdasl<|~f(O$o~A?FarcW*)Fe*vwclnHDZ?}+SP zgYR&kn8RYb9O9><=RQuodIuwAN)ulS;SGy)PX}i^~1UYf0k$b`JnqicQgxToaq?rolg6VA7$>(o?TbE z6jEI3BBqxbUgL{6t@896dly!z7dXPugQXkT$}T@PWqm_3(f}$Agk`G%;50L{=*mi| zTE(qgB%svciozkc)B +

Pyramid Starter project

+

404 Page Not Found

+ +{% endblock content %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 b/synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 new file mode 100644 index 000000000..56381fbca --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 @@ -0,0 +1,64 @@ + + + + + + + + + + + Cookiecutter Starter project for the Pyramid Web Framework + + + + + + + + + + + + + +
+
+
+
+ +
+
+ {% block content %} +

No content

+ {% endblock content %} +
+
+
+
+ +
+
+
+
+ Copyright © Pylons Project +
+
+
+
+ + + + + + + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/mytemplate.jinja2 b/synthetic_tree_viewer/synthetic_tree_viewer/templates/mytemplate.jinja2 new file mode 100644 index 000000000..f2e7283f8 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/mytemplate.jinja2 @@ -0,0 +1,8 @@ +{% extends "layout.jinja2" %} + +{% block content %} +
+

Pyramid Starter project

+

Welcome to {{project}}, a Pyramid application generated by
Cookiecutter.

+
+{% endblock content %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/__init__.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/__init__.py new file mode 100644 index 000000000..e69de29bb diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/default.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/default.py new file mode 100644 index 000000000..311bed6e2 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/default.py @@ -0,0 +1,6 @@ +from pyramid.view import view_config + + +@view_config(route_name='home', renderer='synthetic_tree_viewer:templates/mytemplate.jinja2') +def my_view(request): + return {'project': 'synthetic tree viewer'} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/notfound.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/notfound.py new file mode 100644 index 000000000..6e5c5b4c2 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/notfound.py @@ -0,0 +1,7 @@ +from pyramid.view import notfound_view_config + + +@notfound_view_config(renderer='synthetic_tree_viewer:templates/404.jinja2') +def notfound_view(request): + request.response.status = 404 + return {} diff --git a/synthetic_tree_viewer/testing.ini b/synthetic_tree_viewer/testing.ini new file mode 100644 index 000000000..7eb5572b1 --- /dev/null +++ b/synthetic_tree_viewer/testing.ini @@ -0,0 +1,53 @@ +### +# app configuration +# https://docs.pylonsproject.org/projects/pyramid/en/latest/narr/environment.html +### + +[app:main] +use = egg:synthetic_tree_viewer + +pyramid.reload_templates = false +pyramid.debug_authorization = false +pyramid.debug_notfound = false +pyramid.debug_routematch = false +pyramid.default_locale_name = en + +### +# wsgi server configuration +### + +[server:main] +use = egg:waitress#main +listen = localhost:6543 + +### +# logging configuration +# https://docs.pylonsproject.org/projects/pyramid/en/latest/narr/logging.html +### + +[loggers] +keys = root, synthetic_tree_viewer + +[handlers] +keys = console + +[formatters] +keys = generic + +[logger_root] +level = INFO +handlers = console + +[logger_synthetic_tree_viewer] +level = DEBUG +handlers = +qualname = synthetic_tree_viewer + +[handler_console] +class = StreamHandler +args = (sys.stderr,) +level = NOTSET +formatter = generic + +[formatter_generic] +format = %(asctime)s %(levelname)-5.5s [%(name)s:%(lineno)s][%(threadName)s] %(message)s diff --git a/synthetic_tree_viewer/tests/__init__.py b/synthetic_tree_viewer/tests/__init__.py new file mode 100644 index 000000000..e69de29bb diff --git a/synthetic_tree_viewer/tests/conftest.py b/synthetic_tree_viewer/tests/conftest.py new file mode 100644 index 000000000..08dcbea49 --- /dev/null +++ b/synthetic_tree_viewer/tests/conftest.py @@ -0,0 +1,76 @@ +import os +from pyramid.paster import get_appsettings +from pyramid.scripting import prepare +from pyramid.testing import DummyRequest, testConfig +import pytest +import webtest + +from synthetic_tree_viewer import main + + +def pytest_addoption(parser): + parser.addoption('--ini', action='store', metavar='INI_FILE') + +@pytest.fixture(scope='session') +def ini_file(request): + # potentially grab this path from a pytest option + return os.path.abspath(request.config.option.ini or 'testing.ini') + +@pytest.fixture(scope='session') +def app_settings(ini_file): + return get_appsettings(ini_file) + +@pytest.fixture(scope='session') +def app(app_settings): + return main({}, **app_settings) + +@pytest.fixture +def testapp(app): + testapp = webtest.TestApp(app, extra_environ={ + 'HTTP_HOST': 'example.com', + }) + + return testapp + +@pytest.fixture +def app_request(app): + """ + A real request. + + This request is almost identical to a real request but it has some + drawbacks in tests as it's harder to mock data and is heavier. + + """ + with prepare(registry=app.registry) as env: + request = env['request'] + request.host = 'example.com' + yield request + +@pytest.fixture +def dummy_request(): + """ + A lightweight dummy request. + + This request is ultra-lightweight and should be used only when the request + itself is not a large focus in the call-stack. It is much easier to mock + and control side-effects using this object, however: + + - It does not have request extensions applied. + - Threadlocals are not properly pushed. + + """ + request = DummyRequest() + request.host = 'example.com' + + return request + +@pytest.fixture +def dummy_config(dummy_request): + """ + A dummy :class:`pyramid.config.Configurator` object. This allows for + mock configuration, including configuration for ``dummy_request``, as well + as pushing the appropriate threadlocals. + + """ + with testConfig(request=dummy_request) as config: + yield config diff --git a/synthetic_tree_viewer/tests/test_functional.py b/synthetic_tree_viewer/tests/test_functional.py new file mode 100644 index 000000000..bac5d63f4 --- /dev/null +++ b/synthetic_tree_viewer/tests/test_functional.py @@ -0,0 +1,7 @@ +def test_root(testapp): + res = testapp.get('/', status=200) + assert b'Pyramid' in res.body + +def test_notfound(testapp): + res = testapp.get('/badurl', status=404) + assert res.status_code == 404 diff --git a/synthetic_tree_viewer/tests/test_views.py b/synthetic_tree_viewer/tests/test_views.py new file mode 100644 index 000000000..bb1359081 --- /dev/null +++ b/synthetic_tree_viewer/tests/test_views.py @@ -0,0 +1,13 @@ +from synthetic_tree_viewer.views.default import my_view +from synthetic_tree_viewer.views.notfound import notfound_view + + +def test_my_view(app_request): + info = my_view(app_request) + assert app_request.response.status_int == 200 + assert info['project'] == 'synthetic tree viewer' + +def test_notfound_view(app_request): + info = notfound_view(app_request) + assert app_request.response.status_int == 404 + assert info == {} From dd04efd4c0b33971c43b1b1b3c3edffe575f56bd Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Fri, 9 Sep 2022 14:45:11 -0400 Subject: [PATCH 05/86] Update pinned modules after cookiecutter NB - This now includes some modules from the *internal* requirements from synthetic_tree_viewer/setup.py [testing] --- pipdeptree.out | 119 ++++++++++++++++++++++++++++++++++++++++------- requirements.txt | 21 +++++++++ 2 files changed, 123 insertions(+), 17 deletions(-) diff --git a/pipdeptree.out b/pipdeptree.out index 2d8cd5118..e97825435 100644 --- a/pipdeptree.out +++ b/pipdeptree.out @@ -24,23 +24,16 @@ cookiecutter==2.1.1 locket==0.1.1 pip==22.2.2 pipdeptree==2.3.1 -pyramid==2.0 - - hupper [required: >=1.5, installed: 1.10.3] - - plaster [required: Any, installed: 1.0] - - setuptools [required: Any, installed: 60.10.0] - - plaster-pastedeploy [required: Any, installed: 0.7] - - PasteDeploy [required: >=2.0, installed: 2.1.1] - - setuptools [required: Any, installed: 60.10.0] - - plaster [required: >=0.5, installed: 1.0] - - setuptools [required: Any, installed: 60.10.0] - - setuptools [required: Any, installed: 60.10.0] - - translationstring [required: >=0.4, installed: 1.4] - - venusian [required: >=1.0, installed: 3.0.0] - - webob [required: >=1.8.3, installed: 1.8.7] - - zope.deprecation [required: >=3.5.0, installed: 4.4.0] - - setuptools [required: Any, installed: 60.10.0] - - zope.interface [required: >=3.8.0, installed: 5.4.0] - - setuptools [required: Any, installed: 60.10.0] +pytest-cov==3.0.0 + - coverage [required: >=5.2.1, installed: 6.4.4] + - pytest [required: >=4.6, installed: 7.1.3] + - attrs [required: >=19.2.0, installed: 22.1.0] + - iniconfig [required: Any, installed: 1.1.1] + - packaging [required: Any, installed: 21.3] + - pyparsing [required: >=2.0.2,!=3.0.5, installed: 3.0.9] + - pluggy [required: >=0.12,<2.0, installed: 1.0.0] + - py [required: >=1.8.2, installed: 1.11.0] + - tomli [required: >=1.0.0, installed: 2.0.1] python-jwt==3.3.0 - jwcrypto [required: >=0.8, installed: 0.9.1] - cryptography [required: >=2.3, installed: 38.0.1] @@ -49,3 +42,95 @@ python-jwt==3.3.0 - deprecated [required: Any, installed: 1.2.13] - wrapt [required: >=1.10,<2, installed: 1.14.1] - six [required: Any, installed: 1.16.0] +synthetic-tree-viewer==0.0 + - plaster-pastedeploy [required: Any, installed: 0.7] + - PasteDeploy [required: >=2.0, installed: 2.1.1] + - setuptools [required: Any, installed: 60.10.0] + - plaster [required: >=0.5, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - pyramid [required: Any, installed: 2.0] + - hupper [required: >=1.5, installed: 1.10.3] + - plaster [required: Any, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - plaster-pastedeploy [required: Any, installed: 0.7] + - PasteDeploy [required: >=2.0, installed: 2.1.1] + - setuptools [required: Any, installed: 60.10.0] + - plaster [required: >=0.5, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - setuptools [required: Any, installed: 60.10.0] + - translationstring [required: >=0.4, installed: 1.4] + - venusian [required: >=1.0, installed: 3.0.0] + - webob [required: >=1.8.3, installed: 1.8.7] + - zope.deprecation [required: >=3.5.0, installed: 4.4.0] + - setuptools [required: Any, installed: 60.10.0] + - zope.interface [required: >=3.8.0, installed: 5.4.0] + - setuptools [required: Any, installed: 60.10.0] + - pyramid-debugtoolbar [required: Any, installed: 4.9] + - Pygments [required: Any, installed: 2.13.0] + - pyramid [required: >=1.4, installed: 2.0] + - hupper [required: >=1.5, installed: 1.10.3] + - plaster [required: Any, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - plaster-pastedeploy [required: Any, installed: 0.7] + - PasteDeploy [required: >=2.0, installed: 2.1.1] + - setuptools [required: Any, installed: 60.10.0] + - plaster [required: >=0.5, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - setuptools [required: Any, installed: 60.10.0] + - translationstring [required: >=0.4, installed: 1.4] + - venusian [required: >=1.0, installed: 3.0.0] + - webob [required: >=1.8.3, installed: 1.8.7] + - zope.deprecation [required: >=3.5.0, installed: 4.4.0] + - setuptools [required: Any, installed: 60.10.0] + - zope.interface [required: >=3.8.0, installed: 5.4.0] + - setuptools [required: Any, installed: 60.10.0] + - pyramid-mako [required: >=0.3.1, installed: 1.1.0] + - Mako [required: >=1.1.0, installed: 1.2.2] + - MarkupSafe [required: >=0.9.2, installed: 2.1.1] + - pyramid [required: Any, installed: 2.0] + - hupper [required: >=1.5, installed: 1.10.3] + - plaster [required: Any, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - plaster-pastedeploy [required: Any, installed: 0.7] + - PasteDeploy [required: >=2.0, installed: 2.1.1] + - setuptools [required: Any, installed: 60.10.0] + - plaster [required: >=0.5, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - setuptools [required: Any, installed: 60.10.0] + - translationstring [required: >=0.4, installed: 1.4] + - venusian [required: >=1.0, installed: 3.0.0] + - webob [required: >=1.8.3, installed: 1.8.7] + - zope.deprecation [required: >=3.5.0, installed: 4.4.0] + - setuptools [required: Any, installed: 60.10.0] + - zope.interface [required: >=3.8.0, installed: 5.4.0] + - setuptools [required: Any, installed: 60.10.0] + - repoze.lru [required: Any, installed: 0.7] + - pyramid-jinja2 [required: Any, installed: 2.10] + - jinja2 [required: >=2.5.0,!=2.11.2,!=2.11.1,!=2.11.0, installed: 3.1.2] + - MarkupSafe [required: >=2.0, installed: 2.1.1] + - markupsafe [required: Any, installed: 2.1.1] + - pyramid [required: >=1.3.0, installed: 2.0] + - hupper [required: >=1.5, installed: 1.10.3] + - plaster [required: Any, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - plaster-pastedeploy [required: Any, installed: 0.7] + - PasteDeploy [required: >=2.0, installed: 2.1.1] + - setuptools [required: Any, installed: 60.10.0] + - plaster [required: >=0.5, installed: 1.0] + - setuptools [required: Any, installed: 60.10.0] + - setuptools [required: Any, installed: 60.10.0] + - translationstring [required: >=0.4, installed: 1.4] + - venusian [required: >=1.0, installed: 3.0.0] + - webob [required: >=1.8.3, installed: 1.8.7] + - zope.deprecation [required: >=3.5.0, installed: 4.4.0] + - setuptools [required: Any, installed: 60.10.0] + - zope.interface [required: >=3.8.0, installed: 5.4.0] + - setuptools [required: Any, installed: 60.10.0] + - zope.deprecation [required: Any, installed: 4.4.0] + - setuptools [required: Any, installed: 60.10.0] + - waitress [required: Any, installed: 2.1.2] +WebTest==3.0.0 + - beautifulsoup4 [required: Any, installed: 4.11.1] + - soupsieve [required: >1.2, installed: 2.3.2.post1] + - waitress [required: >=0.8.5, installed: 2.1.2] + - WebOb [required: >=1.2, installed: 1.8.7] diff --git a/requirements.txt b/requirements.txt index 151617506..afa78c12a 100644 --- a/requirements.txt +++ b/requirements.txt @@ -9,32 +9,53 @@ pipdeptree==2.3.1 cookiecutter==2.1.1 ## The following requirements were added by pip freeze: arrow==0.15.8 +attrs==22.1.0 +beautifulsoup4==4.11.1 binaryornot==0.4.4 certifi==2022.6.15.1 cffi==1.15.1 chardet==5.0.0 charset-normalizer==2.1.1 click==8.1.3 +coverage==6.4.4 cryptography==38.0.1 Deprecated==1.2.13 hupper==1.10.3 idna==3.3 +iniconfig==1.1.1 Jinja2==3.1.2 jinja2-time==0.2.0 +Mako==1.2.2 MarkupSafe==2.1.1 +packaging==21.3 PasteDeploy==2.1.1 plaster==1.0 plaster-pastedeploy==0.7 +pluggy==1.0.0 +py==1.11.0 pycparser==2.21 +Pygments==2.13.0 +pyparsing==3.0.9 +pyramid-debugtoolbar==4.9 +pyramid-jinja2==2.10 +pyramid-mako==1.1.0 +pytest==7.1.3 +pytest-cov==3.0.0 python-slugify==6.1.2 PyYAML==6.0 +repoze.lru==0.7 six==1.16.0 +soupsieve==2.3.2.post1 +-e git+ssh://git@github.com/OpenTreeOfLife/webapp-tree-viewer.git@645ded743b6b5c0660c2eaa0b92c4f9b7e839fe2#egg=synthetic_tree_viewer&subdirectory=synthetic_tree_viewer text-unidecode==1.3 +tomli==2.0.1 translationstring==1.4 urllib3==1.26.12 venusian==3.0.0 +waitress==2.1.2 webencodings==0.5.1 WebOb==1.8.7 +WebTest==3.0.0 wrapt==1.14.1 zope.deprecation==4.4.0 zope.interface==5.4.0 From ee3bb6f8dac95da68880723a27683ec69164350a Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Tue, 13 Sep 2022 15:16:12 -0400 Subject: [PATCH 06/86] Prepare to migrate static assets and main layout --- .../synthetic_tree_viewer/routes.py | 5 ++++- .../static/pyramid-16x16.png | Bin 1319 -> 0 bytes .../synthetic_tree_viewer/static/pyramid.png | Bin 12901 -> 0 bytes .../static/{theme.css => theme.ORIGINAL.css} | 0 .../{layout.jinja2 => layout.ORIGINAL.jinja2} | 0 .../{mytemplate.jinja2 => tree_view.jinja2} | 0 .../synthetic_tree_viewer/views/default.py | 8 ++++++-- 7 files changed, 10 insertions(+), 3 deletions(-) delete mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid-16x16.png delete mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid.png rename synthetic_tree_viewer/synthetic_tree_viewer/static/{theme.css => theme.ORIGINAL.css} (100%) rename synthetic_tree_viewer/synthetic_tree_viewer/templates/{layout.jinja2 => layout.ORIGINAL.jinja2} (100%) rename synthetic_tree_viewer/synthetic_tree_viewer/templates/{mytemplate.jinja2 => tree_view.jinja2} (100%) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/routes.py b/synthetic_tree_viewer/synthetic_tree_viewer/routes.py index 25504ad4d..8b7a69503 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/routes.py +++ b/synthetic_tree_viewer/synthetic_tree_viewer/routes.py @@ -1,3 +1,6 @@ def includeme(config): config.add_static_view('static', 'static', cache_max_age=3600) - config.add_route('home', '/') + # match all explicit URLs before the default tree view + + # default synth-tree view (with catch-all path) + config.add_route('tree_view', '/{full_path:.*}') diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid-16x16.png b/synthetic_tree_viewer/synthetic_tree_viewer/static/pyramid-16x16.png deleted file mode 100644 index 979203112e76ba4cfdb8cd6f108f4275e987d99a..0000000000000000000000000000000000000000 GIT binary patch literal 0 HcmV?d00001 literal 1319 zcmeAS@N?(olHy`uVBq!ia0vp^0wB!61|;P_|4#%`k|nMYCBgY=CFO}lsSJ)O`AMk? zp1FzXsX?iUDV2pMQ*9U+n3Xd_B1$5BeXNr6bM+EIYV;~{3xK*A7;Nk-3KEmEQ%e+* zQqwc@Y?a>c-mj#PnPRIHZt82`Ti~3Uk?B!Ylp0*+7m{3+ootz+WN)WnQ(*-(AUCxn zQK2F?C$HG5!d3}vt`(3C64qBz04piUwpD^SD#ABF!8yMuRl!uxR5#hc&_u!9QqR!T z(8R(}N5ROz&{*HVSl`fC*U-qyz|zXlQ~?TIxIyg#@@$ndN=gc>^!3Zj z%k|2Q_413-^$jg8E%gnI^o@*kfhu&1EAvVcD|GXUm0>2hq!uR^WfqiV=I1GZOiWD5 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.../static/css/bootstrap.css | 5281 +++++++++++++++++ .../static/css/calendar.css | 7 + .../static/css/jquery.splitter.css | 47 + .../static/css/web2py.css | 314 + .../static/css/web2py_bootstrap.css | 231 + .../static/css/web2py_bootstrap_nojs.css | 122 + .../synthetic_tree_viewer/static/favicon.ico | Bin 0 -> 370070 bytes .../static/images/Github.png | Bin 0 -> 2372 bytes .../static/images/Logo_Google_groups.png | Bin 0 -> 7089 bytes .../static/images/banner-dev.gif | Bin 0 -> 1519 bytes .../static/images/banner-staging.gif | Bin 0 -> 959 bytes .../static/images/facebook.png | Bin 0 -> 991 bytes .../static/images/gitter.png | Bin 0 -> 1717 bytes .../images/glyphicons-halflings-white.png | Bin 0 -> 8777 bytes .../static/images/glyphicons-halflings.png | Bin 0 -> 12799 bytes .../static/images/gplus-32.png | Bin 0 -> 1513 bytes .../static/images/logo.png | Bin 0 -> 48981 bytes .../static/images/mini-opentree-logo.png | Bin 0 -> 2252 bytes .../static/images/phylopic-vignette.png | Bin 0 -> 389 bytes .../static/images/spinner.gif | Bin 0 -> 36372 bytes .../static/images/tree-view-ancestors.png | Bin 0 -> 4652 bytes .../static/images/tree-view-dotted-paths.png | Bin 0 -> 3040 bytes .../static/images/tree-view-edge-info.png | Bin 0 -> 6976 bytes .../static/images/tree-view-node-info.png | Bin 0 -> 6824 bytes .../static/images/tree-view-node-jump.png | Bin 0 -> 7192 bytes .../static/images/tree-view-node-sizes.png | Bin 0 -> 3776 bytes .../static/images/tree-view-solid-paths.png | Bin 0 -> 3033 bytes .../static/images/tree-view-tips.png | Bin 0 -> 5925 bytes .../static/images/twitter.png | Bin 0 -> 1120 bytes .../static/img/glyphicons-halflings-white.png | Bin 0 -> 8777 bytes .../static/img/glyphicons-halflings.png | Bin 0 -> 12799 bytes .../static/js/analytics.min.js | 4 + .../static/js/argus/browser.html | 9 + .../static/js/argus/drawtree.js | 2188 +++++++ .../static/js/argus/format.css | 47 + .../static/js/argus/index.html | 30 + .../static/js/argus/jquery-1.7.2.min.js | 4 + .../static/js/argus/loadtaxdata.js | 138 + .../static/js/argus/nameresults.html | 17 + .../static/js/argus/raphael-min.js | 12 + .../static/js/bootstrap-affix.js | 117 + .../static/js/bootstrap-alert.js | 99 + .../static/js/bootstrap-button.js | 105 + .../static/js/bootstrap-carousel.js | 207 + .../static/js/bootstrap-collapse.js | 167 + .../static/js/bootstrap-dropdown.js | 176 + .../static/js/bootstrap-modal.js | 247 + .../static/js/bootstrap-popover.js | 114 + .../static/js/bootstrap-scrollspy.js | 162 + .../static/js/bootstrap-tab.js | 144 + .../static/js/bootstrap-tooltip.js | 361 ++ .../static/js/bootstrap-transition.js | 60 + .../static/js/bootstrap-typeahead.js | 335 ++ .../static/js/bootstrap.js | 2280 +++++++ .../static/js/bootstrap.min.js | 6 + .../static/js/calendar.js | 42 + .../static/js/dd_belatedpng.js | 13 + .../static/js/html5shiv.js | 8 + .../static/js/jquery-1.9.1.min.js | 5 + .../static/js/jquery.history.js | 1 + .../synthetic_tree_viewer/static/js/jquery.js | 2 + .../static/js/jquery.splitter-0.6.js | 215 + .../synthetic_tree_viewer/static/js/json2.js | 486 ++ .../static/js/modernizr.custom.js | 4 + .../static/js/moment.min.js | 7 + .../synthetic_tree_viewer/static/js/share.js | 44 + .../static/js/treeview.js | 1524 +++++ .../synthetic_tree_viewer/static/js/web2py.js | 218 + .../static/js/web2py_bootstrap.js | 28 + .../static/js/webapp-helpers.js | 194 + .../plugin_layouts/opentree/default.css | 570 ++ .../static/plugin_layouts/superfish.css | 139 + .../static/plugin_layouts/superfish.js | 121 + .../css/localcomments.css | 166 + .../synthetic_tree_viewer/static/robots.txt | 30 + .../static/statistics/ott.json | 62 + .../static/statistics/synthesis.json | 135 + .../synthetic_tree_viewer/static/temp.diff | 144 + .../templates/layout.jinja2 | 649 ++ 83 files changed, 18929 insertions(+) create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/403.html create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/404.html create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/500.html create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/css/bootstrap-responsive.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/css/bootstrap.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/css/calendar.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/css/jquery.splitter.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap_nojs.css create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/favicon.ico create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/images/Github.png create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/images/Logo_Google_groups.png 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synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/raphael-min.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-affix.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-alert.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-button.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-carousel.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-collapse.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-dropdown.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-modal.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-popover.js create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-scrollspy.js create mode 100644 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under the Apache License v2.0 + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Designed and built with all the love in the world @twitter by @mdo and @fat. + */ +.clearfix { + *zoom: 1; +} +.clearfix:before, +.clearfix:after { + display: table; + content: ""; + line-height: 0; +} +.clearfix:after { + clear: both; +} +.hide-text { + font: 0/0 a; + color: transparent; + text-shadow: none; + background-color: transparent; + border: 0; +} +.input-block-level { + display: block; + width: 100%; + min-height: 30px; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; +} +@-ms-viewport { + width: device-width; +} +.hidden { + display: none; + visibility: hidden; +} +.visible-phone { + display: none !important; +} +.visible-tablet { + display: none !important; +} +.hidden-desktop { + display: none !important; +} +.visible-desktop { + display: inherit !important; +} +@media (min-width: 768px) and (max-width: 979px) { + .hidden-desktop { + display: inherit !important; + } + .visible-desktop { + display: none !important ; + } + .visible-tablet { + display: inherit !important; + } + .hidden-tablet { + display: none !important; + } +} +@media (max-width: 767px) { + .hidden-desktop { + display: inherit !important; + } + .visible-desktop { + display: none !important; + } + .visible-phone { + display: inherit !important; + } + .hidden-phone { + display: none !important; + } +} +.visible-print { + display: none !important; +} +@media print { + .visible-print { + display: inherit !important; + } + .hidden-print { + display: none !important; + } +} +@media (min-width: 1200px) { + .row { + margin-left: -30px; + *zoom: 1; + } + .row:before, + .row:after { + display: table; + content: ""; + line-height: 0; + } + .row:after { + clear: both; + } + [class*="span"] { + float: left; + min-height: 1px; + margin-left: 30px; + } + .container, + .navbar-static-top .container, + .navbar-fixed-top .container, + .navbar-fixed-bottom .container { + width: 1170px; + } + .span12 { + width: 1170px; + } + .span11 { + width: 1070px; + } + .span10 { + width: 970px; + } + .span9 { + width: 870px; + } + .span8 { + width: 770px; + } + .span7 { + width: 670px; + } + .span6 { + width: 570px; + } + .span5 { + width: 470px; + } + .span4 { + width: 370px; + } + .span3 { + width: 270px; + } + .span2 { + width: 170px; + } + .span1 { + width: 70px; + } + .offset12 { + margin-left: 1230px; + } + .offset11 { + margin-left: 1130px; + } + .offset10 { + margin-left: 1030px; + } + .offset9 { + margin-left: 930px; + } + .offset8 { + margin-left: 830px; + } + .offset7 { + margin-left: 730px; + } + .offset6 { + margin-left: 630px; + } + .offset5 { + margin-left: 530px; + } + .offset4 { + margin-left: 430px; + } + .offset3 { + margin-left: 330px; + } + .offset2 { + margin-left: 230px; + } + .offset1 { + margin-left: 130px; + } + .row-fluid { + width: 100%; + *zoom: 1; + } + .row-fluid:before, + .row-fluid:after { + display: table; + content: ""; + line-height: 0; + } + .row-fluid:after { + clear: both; + } + .row-fluid [class*="span"] { + display: block; + width: 100%; + min-height: 30px; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; + float: left; + margin-left: 2.564102564102564%; + *margin-left: 2.5109110747408616%; + } + .row-fluid [class*="span"]:first-child { + margin-left: 0; + } + .row-fluid .controls-row [class*="span"] + [class*="span"] { + margin-left: 2.564102564102564%; + } + .row-fluid .span12 { + width: 100%; + *width: 99.94680851063829%; + } + .row-fluid .span11 { + width: 91.45299145299145%; + *width: 91.39979996362975%; + } + .row-fluid .span10 { + width: 82.90598290598291%; + *width: 82.8527914166212%; + } + .row-fluid .span9 { + width: 74.35897435897436%; + *width: 74.30578286961266%; + } + .row-fluid .span8 { + width: 65.81196581196582%; + *width: 65.75877432260411%; + } + .row-fluid .span7 { + width: 57.26495726495726%; + *width: 57.21176577559556%; + } + 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textarea.span3, + .uneditable-input.span3 { + width: 256px; + } + input.span2, + textarea.span2, + .uneditable-input.span2 { + width: 156px; + } + input.span1, + textarea.span1, + .uneditable-input.span1 { + width: 56px; + } + .thumbnails { + margin-left: -30px; + } + .thumbnails > li { + margin-left: 30px; + } + .row-fluid .thumbnails { + margin-left: 0; + } +} +@media (min-width: 768px) and (max-width: 979px) { + .row { + margin-left: -20px; + *zoom: 1; + } + .row:before, + .row:after { + display: table; + content: ""; + line-height: 0; + } + .row:after { + clear: both; + } + [class*="span"] { + float: left; + min-height: 1px; + margin-left: 20px; + } + .container, + .navbar-static-top .container, + .navbar-fixed-top .container, + .navbar-fixed-bottom .container { + width: 724px; + } + .span12 { + width: 724px; + } + .span11 { + width: 662px; + } + .span10 { + width: 600px; + } + .span9 { + width: 538px; + } + .span8 { + width: 476px; + } + .span7 { + width: 414px; + } + .span6 { + width: 352px; + } + .span5 { + width: 290px; + } + .span4 { + width: 228px; + } + .span3 { + width: 166px; + } + .span2 { + width: 104px; + } + .span1 { + width: 42px; + } + .offset12 { + margin-left: 764px; + } + .offset11 { + margin-left: 702px; + } + .offset10 { + margin-left: 640px; + } + .offset9 { + margin-left: 578px; + } + .offset8 { + margin-left: 516px; + } + .offset7 { + margin-left: 454px; + } + .offset6 { + margin-left: 392px; + } + .offset5 { + margin-left: 330px; + } + .offset4 { + margin-left: 268px; + } + .offset3 { + margin-left: 206px; + } + .offset2 { + margin-left: 144px; + } + .offset1 { + margin-left: 82px; + } + .row-fluid { + width: 100%; + *zoom: 1; + } + .row-fluid:before, + .row-fluid:after { + display: table; + content: ""; + line-height: 0; + } + .row-fluid:after { + clear: both; + } + .row-fluid [class*="span"] { + display: block; + width: 100%; + min-height: 30px; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; + float: left; + margin-left: 2.7624309392265194%; + *margin-left: 2.709239449864817%; + } + .row-fluid [class*="span"]:first-child { + margin-left: 0; + } + .row-fluid .controls-row [class*="span"] + [class*="span"] { + margin-left: 2.7624309392265194%; + } + .row-fluid .span12 { + width: 100%; + *width: 99.94680851063829%; + } + .row-fluid .span11 { + width: 91.43646408839778%; + *width: 91.38327259903608%; + } + .row-fluid .span10 { + width: 82.87292817679558%; + *width: 82.81973668743387%; + } + .row-fluid .span9 { + width: 74.30939226519337%; + *width: 74.25620077583166%; + } + .row-fluid .span8 { + width: 65.74585635359117%; + *width: 65.69266486422946%; + } + .row-fluid .span7 { + width: 57.18232044198895%; + *width: 57.12912895262725%; + } + .row-fluid .span6 { + width: 48.61878453038674%; + *width: 48.56559304102504%; + } + .row-fluid .span5 { + width: 40.05524861878453%; + *width: 40.00205712942283%; + } + .row-fluid .span4 { + width: 31.491712707182323%; + *width: 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+ margin-left: 37.01657458563536%; + *margin-left: 36.91019160691196%; + } + .row-fluid .offset4:first-child { + margin-left: 34.25414364640884%; + *margin-left: 34.14776066768544%; + } + .row-fluid .offset3 { + margin-left: 28.45303867403315%; + *margin-left: 28.346655695309746%; + } + .row-fluid .offset3:first-child { + margin-left: 25.69060773480663%; + *margin-left: 25.584224756083227%; + } + .row-fluid .offset2 { + margin-left: 19.88950276243094%; + *margin-left: 19.783119783707537%; + } + .row-fluid .offset2:first-child { + margin-left: 17.12707182320442%; + *margin-left: 17.02068884448102%; + } + .row-fluid .offset1 { + margin-left: 11.32596685082873%; + *margin-left: 11.219583872105325%; + } + .row-fluid .offset1:first-child { + margin-left: 8.56353591160221%; + *margin-left: 8.457152932878806%; + } + input, + textarea, + .uneditable-input { + margin-left: 0; + } + .controls-row [class*="span"] + [class*="span"] { + margin-left: 20px; + } + input.span12, + textarea.span12, + .uneditable-input.span12 { + width: 710px; + } + input.span11, + textarea.span11, + .uneditable-input.span11 { + width: 648px; + } + input.span10, + textarea.span10, + .uneditable-input.span10 { + width: 586px; + } + input.span9, + textarea.span9, + .uneditable-input.span9 { + width: 524px; + } + input.span8, + textarea.span8, + .uneditable-input.span8 { + width: 462px; + } + input.span7, + textarea.span7, + .uneditable-input.span7 { + width: 400px; + } + input.span6, + textarea.span6, + .uneditable-input.span6 { + width: 338px; + } + input.span5, + textarea.span5, + .uneditable-input.span5 { + width: 276px; + } + input.span4, + textarea.span4, + .uneditable-input.span4 { + width: 214px; + } + input.span3, + textarea.span3, + .uneditable-input.span3 { + width: 152px; + } + input.span2, + textarea.span2, + .uneditable-input.span2 { + width: 90px; + } + input.span1, + textarea.span1, + .uneditable-input.span1 { + width: 28px; + } +} +@media (max-width: 767px) { + body { + padding-left: 20px; + padding-right: 20px; + } + .navbar-fixed-top, + .navbar-fixed-bottom, + .navbar-static-top { + margin-left: -20px; + margin-right: -20px; + } + .container-fluid { + padding: 0; + } + .dl-horizontal dt { + float: none; + clear: none; + width: auto; + text-align: left; + } + .dl-horizontal dd { + margin-left: 0; + } + .container { + width: auto; + } + .row-fluid { + width: 100%; + } + .row, + .thumbnails { + margin-left: 0; + } + .thumbnails > li { + float: none; + margin-left: 0; + } + [class*="span"], + .uneditable-input[class*="span"], + .row-fluid [class*="span"] { + float: none; + display: block; + width: 100%; + margin-left: 0; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; + } + .span12, + .row-fluid .span12 { + width: 100%; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; + } + .row-fluid [class*="offset"]:first-child { + margin-left: 0; + } + .input-large, + .input-xlarge, + .input-xxlarge, + input[class*="span"], + select[class*="span"], + textarea[class*="span"], + .uneditable-input { + display: block; + width: 100%; + min-height: 30px; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; + } + .input-prepend input, + .input-append input, + .input-prepend input[class*="span"], + .input-append input[class*="span"] { + display: inline-block; + width: auto; + } + .controls-row [class*="span"] + [class*="span"] { + margin-left: 0; + } + .modal { + position: fixed; + top: 20px; + left: 20px; + right: 20px; + width: auto; + margin: 0; + } + .modal.fade { + top: -100px; + } + .modal.fade.in { + top: 20px; + } +} +@media (max-width: 480px) { + .nav-collapse { + -webkit-transform: translate3d(0, 0, 0); + } + .page-header h1 small { + display: block; + line-height: 20px; + } + input[type="checkbox"], + input[type="radio"] { + border: 1px solid #ccc; + } + .form-horizontal .control-label { + float: none; + width: auto; + padding-top: 0; + text-align: left; + } + .form-horizontal .controls { + margin-left: 0; + } + .form-horizontal .control-list { + padding-top: 0; + } + .form-horizontal .form-actions { + padding-left: 10px; + padding-right: 10px; + } + .media .pull-left, + .media .pull-right { + float: none; + display: block; + margin-bottom: 10px; + } + .media-object { + margin-right: 0; + margin-left: 0; + } + .modal { + top: 10px; + left: 10px; + right: 10px; + } + .modal-header .close { + padding: 10px; + margin: -10px; + } + .carousel-caption { + position: static; + } +} +@media (max-width: 979px) { + body { + padding-top: 0; + } + .navbar-fixed-top, + .navbar-fixed-bottom { + position: static; + } + .navbar-fixed-top { + margin-bottom: 20px; + } + .navbar-fixed-bottom { + margin-top: 20px; + } + .navbar-fixed-top .navbar-inner, + .navbar-fixed-bottom .navbar-inner { + padding: 5px; + } + .navbar .container { + width: auto; + padding: 0; + } + .navbar .brand { + padding-left: 10px; + padding-right: 10px; + margin: 0 0 0 -5px; + } + .nav-collapse { + clear: both; + } + .nav-collapse .nav { + float: none; + margin: 0 0 10px; + } + .nav-collapse .nav > li { + float: none; + } + .nav-collapse .nav > li > a { + margin-bottom: 2px; + } + .nav-collapse .nav > .divider-vertical { + display: none; + } + .nav-collapse .nav .nav-header { + color: #777777; + text-shadow: none; + } + .nav-collapse .nav > li > a, + .nav-collapse .dropdown-menu a { + padding: 9px 15px; + font-weight: bold; + color: #777777; + -webkit-border-radius: 3px; + -moz-border-radius: 3px; + border-radius: 3px; + } + .nav-collapse .btn { + padding: 4px 10px 4px; + font-weight: normal; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; + } + .nav-collapse .dropdown-menu li + li a { + margin-bottom: 2px; + } + .nav-collapse .nav > li > a:hover, + .nav-collapse .nav > li > a:focus, + .nav-collapse .dropdown-menu a:hover, + .nav-collapse .dropdown-menu a:focus { + background-color: #f2f2f2; + } + .navbar-inverse .nav-collapse .nav > li > a, + .navbar-inverse .nav-collapse .dropdown-menu a { + color: #999999; + } + .navbar-inverse .nav-collapse .nav > li > a:hover, + .navbar-inverse .nav-collapse .nav > li > a:focus, + .navbar-inverse .nav-collapse .dropdown-menu a:hover, + .navbar-inverse .nav-collapse .dropdown-menu a:focus { + background-color: #111111; + } + .nav-collapse.in .btn-group { + margin-top: 5px; + padding: 0; + } + .nav-collapse .dropdown-menu { + position: static; + top: auto; + left: auto; + float: none; + display: none; + max-width: none; + margin: 0 15px; + padding: 0; + background-color: transparent; + border: none; + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; + -webkit-box-shadow: none; + -moz-box-shadow: none; + box-shadow: none; + } + .nav-collapse .open > .dropdown-menu { + display: block; + } + .nav-collapse .dropdown-menu:before, + .nav-collapse .dropdown-menu:after { + display: none; + } + .nav-collapse .dropdown-menu .divider { + display: none; + } + .nav-collapse .nav > li > .dropdown-menu:before, + .nav-collapse .nav > li > .dropdown-menu:after { + display: none; + } + .nav-collapse .navbar-form, + .nav-collapse .navbar-search { + float: none; + padding: 10px 15px; + margin: 10px 0; + border-top: 1px solid #f2f2f2; + border-bottom: 1px solid #f2f2f2; + -webkit-box-shadow: inset 0 1px 0 rgba(255,255,255,.1), 0 1px 0 rgba(255,255,255,.1); + -moz-box-shadow: inset 0 1px 0 rgba(255,255,255,.1), 0 1px 0 rgba(255,255,255,.1); + box-shadow: inset 0 1px 0 rgba(255,255,255,.1), 0 1px 0 rgba(255,255,255,.1); + } + .navbar-inverse .nav-collapse .navbar-form, + .navbar-inverse .nav-collapse .navbar-search { + border-top-color: #111111; + border-bottom-color: #111111; + } + .navbar .nav-collapse .nav.pull-right { + float: none; + margin-left: 0; + } + .nav-collapse, + .nav-collapse.collapse { + overflow: hidden; + height: 0; + } + .navbar .btn-navbar { + display: block; + } + .navbar-static .navbar-inner { + padding-left: 10px; + padding-right: 10px; + } +} +@media (min-width: 980px) { + .nav-collapse.collapse { + height: auto !important; + overflow: visible !important; + } +} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/css/bootstrap.css b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/bootstrap.css new file mode 100644 index 000000000..0c18c04ad --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/bootstrap.css @@ -0,0 +1,5281 @@ +/*! + * Bootstrap v2.3.2 + * + * Copyright 2012 Twitter, Inc + * Licensed under the Apache License v2.0 + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Designed and built with all the love in the world @twitter by @mdo and @fat. + */ +.clearfix { + *zoom: 1; +} +.clearfix:before, +.clearfix:after { + display: table; + content: ""; + line-height: 0; +} +.clearfix:after { + clear: both; +} +.hide-text { + font: 0/0 a; + color: transparent; + text-shadow: none; + background-color: transparent; + border: 0; +} +.input-block-level { + display: block; + width: 100%; + min-height: 30px; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; +} +article, +aside, +details, +figcaption, +figure, +footer, +header, +hgroup, +nav, +section { + display: block; +} +audio, +canvas, +video { + display: inline-block; + *display: inline; + *zoom: 1; +} +audio:not([controls]) { + display: none; +} +html { + font-size: 100%; + -webkit-text-size-adjust: 100%; + -ms-text-size-adjust: 100%; +} +a:focus { + outline: thin dotted #333; + outline: 5px auto -webkit-focus-ring-color; + outline-offset: -2px; +} +a:hover, +a:active { + outline: 0; +} +sub, +sup { + position: relative; + font-size: 75%; + line-height: 0; + vertical-align: baseline; +} +sup { + top: -0.5em; +} +sub { + bottom: -0.25em; +} +img { + /* Responsive images (ensure images don't scale beyond their parents) */ + + max-width: 100%; + /* Part 1: Set a maxium relative to the parent */ + + width: auto\9; + /* IE7-8 need help adjusting responsive images */ + + height: auto; + /* Part 2: Scale the height according to the width, otherwise you get stretching */ + + vertical-align: middle; + border: 0; + -ms-interpolation-mode: bicubic; +} +#map_canvas img, +.google-maps img { + max-width: none; +} +button, +input, +select, +textarea { + margin: 0; + font-size: 100%; + vertical-align: middle; +} +button, +input { + *overflow: visible; + line-height: normal; +} +button::-moz-focus-inner, +input::-moz-focus-inner { + padding: 0; + border: 0; +} +button, +html input[type="button"], +input[type="reset"], +input[type="submit"] { + -webkit-appearance: button; + cursor: pointer; +} +label, +select, +button, +input[type="button"], +input[type="reset"], +input[type="submit"], +input[type="radio"], +input[type="checkbox"] { + cursor: pointer; +} +input[type="search"] { + -webkit-box-sizing: content-box; + -moz-box-sizing: content-box; + box-sizing: content-box; + -webkit-appearance: textfield; +} +input[type="search"]::-webkit-search-decoration, +input[type="search"]::-webkit-search-cancel-button { + -webkit-appearance: none; +} +textarea { + overflow: auto; + vertical-align: top; +} +@media print { + * { + text-shadow: none !important; + color: #000 !important; + background: transparent !important; + box-shadow: none !important; + } + a, + a:visited { + text-decoration: underline; + } + a[href]:after { + content: " (" attr(href) ")"; + } + abbr[title]:after { + content: " (" attr(title) ")"; + } + .ir a:after, + a[href^="javascript:"]:after, + a[href^="#"]:after { + content: ""; + } + pre, + blockquote { + border: 1px solid #999; + page-break-inside: avoid; + } + thead { + display: table-header-group; + } + tr, + img { + page-break-inside: avoid; + } + img { + max-width: 100% !important; + } + @page { + margin: 0.5cm; + } + p, + h2, + h3 { + orphans: 3; + widows: 3; + } + h2, + h3 { + page-break-after: avoid; + } +} +body { + margin: 0; + font-family: "Helvetica Neue", Helvetica, Arial, sans-serif; + font-size: 14px; + line-height: 20px; + color: #333333; + background-color: #ffffff; +} +a { + color: #0088cc; + text-decoration: none; +} +a:hover, +a:focus { + color: #005580; + text-decoration: underline; +} +.img-rounded { + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; +} +.img-polaroid { + padding: 4px; + background-color: #fff; + border: 1px solid #ccc; + border: 1px solid rgba(0, 0, 0, 0.2); + -webkit-box-shadow: 0 1px 3px rgba(0, 0, 0, 0.1); + -moz-box-shadow: 0 1px 3px rgba(0, 0, 0, 0.1); + box-shadow: 0 1px 3px rgba(0, 0, 0, 0.1); +} +.img-circle { + -webkit-border-radius: 500px; + -moz-border-radius: 500px; + border-radius: 500px; +} +.row { + margin-left: -20px; + *zoom: 1; +} +.row:before, +.row:after { + display: table; + content: ""; + line-height: 0; +} +.row:after { + clear: both; +} +[class*="span"] { + float: left; + min-height: 1px; + margin-left: 20px; +} +.container, +.navbar-static-top .container, +.navbar-fixed-top .container, +.navbar-fixed-bottom .container { + width: 940px; +} +.span12 { + width: 940px; +} +.span11 { + width: 860px; +} +.span10 { + width: 780px; +} +.span9 { + width: 700px; +} +.span8 { + width: 620px; +} +.span7 { + width: 540px; +} +.span6 { + width: 460px; +} +.span5 { + width: 380px; +} +.span4 { + width: 300px; +} +.span3 { + width: 220px; +} +.span2 { + width: 140px; +} +.span1 { + width: 60px; +} +.offset12 { + margin-left: 980px; +} +.offset11 { + margin-left: 900px; +} +.offset10 { + margin-left: 820px; +} +.offset9 { + margin-left: 740px; +} +.offset8 { + margin-left: 660px; +} +.offset7 { + margin-left: 580px; +} +.offset6 { + margin-left: 500px; +} +.offset5 { + margin-left: 420px; +} +.offset4 { + margin-left: 340px; +} +.offset3 { + margin-left: 260px; +} +.offset2 { + margin-left: 180px; +} +.offset1 { + margin-left: 100px; +} +.row-fluid { + width: 100%; + *zoom: 1; +} +.row-fluid:before, +.row-fluid:after { + display: table; + content: ""; + line-height: 0; +} +.row-fluid:after { + clear: both; +} +.row-fluid [class*="span"] { + display: block; + width: 100%; + min-height: 30px; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; + float: left; + margin-left: 2.127659574468085%; + *margin-left: 2.074468085106383%; +} +.row-fluid [class*="span"]:first-child { + margin-left: 0; +} +.row-fluid .controls-row [class*="span"] + [class*="span"] { + margin-left: 2.127659574468085%; +} +.row-fluid .span12 { + width: 100%; + *width: 99.94680851063829%; +} +.row-fluid .span11 { + width: 91.48936170212765%; + *width: 91.43617021276594%; +} +.row-fluid .span10 { + width: 82.97872340425532%; + *width: 82.92553191489361%; +} +.row-fluid .span9 { + width: 74.46808510638297%; + *width: 74.41489361702126%; +} +.row-fluid .span8 { + width: 65.95744680851064%; + *width: 65.90425531914893%; +} +.row-fluid .span7 { + width: 57.44680851063829%; + *width: 57.39361702127659%; 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+[class*="span"].hide, +.row-fluid [class*="span"].hide { + display: none; +} +[class*="span"].pull-right, +.row-fluid [class*="span"].pull-right { + float: right; +} +.container { + margin-right: auto; + margin-left: auto; + *zoom: 1; +} +.container:before, +.container:after { + display: table; + content: ""; + line-height: 0; +} +.container:after { + clear: both; +} +.container-fluid { + padding-right: 20px; + padding-left: 20px; + *zoom: 1; +} +.container-fluid:before, +.container-fluid:after { + display: table; + content: ""; + line-height: 0; +} +.container-fluid:after { + clear: both; +} +p { + margin: 0 0 10px; +} +.lead { + margin-bottom: 20px; + font-size: 21px; + font-weight: 200; + line-height: 30px; +} +small { + font-size: 85%; +} +strong { + font-weight: bold; +} +em { + font-style: italic; +} +cite { + font-style: normal; +} +.muted { + color: #999999; +} +a.muted:hover, +a.muted:focus { + color: #808080; +} +.text-warning { + color: #c09853; +} +a.text-warning:hover, +a.text-warning:focus { + color: #a47e3c; +} +.text-error { + color: #b94a48; +} +a.text-error:hover, +a.text-error:focus { + color: #953b39; +} +.text-info { + color: #3a87ad; +} +a.text-info:hover, +a.text-info:focus { + color: #2d6987; +} +.text-success { + color: #468847; +} +a.text-success:hover, +a.text-success:focus { + color: #356635; +} +.text-left { + text-align: left; +} +.text-right { + text-align: right; +} +.text-center { + text-align: center; +} +h1, +h2, +h3, +h4, +h5, +h6 { + margin: 10px 0; + font-family: inherit; + font-weight: bold; + line-height: 20px; + color: inherit; + text-rendering: optimizelegibility; +} +h1 small, +h2 small, +h3 small, +h4 small, +h5 small, +h6 small { + font-weight: normal; + line-height: 1; + color: #999999; +} +h1, +h2, +h3 { + line-height: 40px; +} +h1 { + font-size: 38.5px; +} +h2 { + font-size: 31.5px; +} +h3 { + font-size: 24.5px; +} +h4 { + font-size: 17.5px; +} +h5 { + font-size: 14px; +} +h6 { + font-size: 11.9px; +} +h1 small { + font-size: 24.5px; +} +h2 small { + font-size: 17.5px; +} +h3 small { + font-size: 14px; +} +h4 small { + font-size: 14px; +} +.page-header { + padding-bottom: 9px; + margin: 20px 0 30px; + border-bottom: 1px solid #eeeeee; +} +ul, +ol { + padding: 0; + margin: 0 0 10px 25px; +} +ul ul, +ul ol, +ol ol, +ol ul { + margin-bottom: 0; +} +li { + line-height: 20px; +} +ul.unstyled, +ol.unstyled { + margin-left: 0; + list-style: none; +} +ul.inline, +ol.inline { + margin-left: 0; + list-style: none; +} +ul.inline > li, +ol.inline > li { + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; + padding-left: 5px; + padding-right: 5px; +} +dl { + margin-bottom: 20px; +} +dt, +dd { + line-height: 20px; +} +dt { + font-weight: bold; +} +dd { + margin-left: 10px; +} +.dl-horizontal { + *zoom: 1; +} +.dl-horizontal:before, +.dl-horizontal:after { + display: table; + content: ""; + line-height: 0; +} +.dl-horizontal:after { + clear: both; +} +.dl-horizontal dt { + float: left; + width: 160px; + clear: left; + text-align: right; + overflow: hidden; + text-overflow: ellipsis; + white-space: nowrap; +} +.dl-horizontal dd { + margin-left: 180px; +} +hr { + margin: 20px 0; + border: 0; + border-top: 1px solid #eeeeee; + border-bottom: 1px solid #ffffff; +} +abbr[title], +abbr[data-original-title] { + cursor: help; + border-bottom: 1px dotted #999999; +} +abbr.initialism { + font-size: 90%; + text-transform: uppercase; +} +blockquote { + padding: 0 0 0 15px; + margin: 0 0 20px; + border-left: 5px solid #eeeeee; +} +blockquote p { + margin-bottom: 0; + font-size: 17.5px; + font-weight: 300; + line-height: 1.25; +} +blockquote small { + display: block; + line-height: 20px; + color: #999999; +} +blockquote small:before { + content: '\2014 \00A0'; +} +blockquote.pull-right { + float: right; + padding-right: 15px; + padding-left: 0; + border-right: 5px solid #eeeeee; + border-left: 0; +} +blockquote.pull-right p, +blockquote.pull-right small { + text-align: right; +} +blockquote.pull-right small:before { + content: ''; +} +blockquote.pull-right small:after { + content: '\00A0 \2014'; +} +q:before, +q:after, +blockquote:before, +blockquote:after { + content: ""; +} +address { + display: block; + margin-bottom: 20px; + font-style: normal; + line-height: 20px; +} +code, +pre { + padding: 0 3px 2px; + font-family: Monaco, Menlo, Consolas, "Courier New", monospace; + font-size: 12px; + color: #333333; + -webkit-border-radius: 3px; + -moz-border-radius: 3px; + border-radius: 3px; +} +code { + padding: 2px 4px; + color: #d14; + background-color: #f7f7f9; + border: 1px solid #e1e1e8; + white-space: nowrap; +} +pre { + display: block; + padding: 9.5px; + margin: 0 0 10px; + font-size: 13px; + line-height: 20px; + word-break: break-all; + word-wrap: break-word; + white-space: pre; + white-space: pre-wrap; + background-color: #f5f5f5; + border: 1px solid #ccc; + border: 1px solid rgba(0, 0, 0, 0.15); + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +pre.prettyprint { + margin-bottom: 20px; +} +pre code { + padding: 0; + color: inherit; + white-space: pre; + white-space: pre-wrap; + background-color: transparent; + border: 0; +} +.pre-scrollable { + max-height: 340px; + overflow-y: scroll; +} +form { + margin: 0 0 20px; +} +fieldset { + padding: 0; + margin: 0; + border: 0; +} +legend { + display: block; + width: 100%; + padding: 0; + margin-bottom: 20px; + font-size: 21px; + line-height: 40px; + color: #333333; + border: 0; + border-bottom: 1px solid #e5e5e5; +} +legend small { + font-size: 15px; + color: #999999; +} +label, +input, +button, +select, +textarea { + font-size: 14px; + font-weight: normal; + line-height: 20px; +} +input, +button, +select, +textarea { + font-family: "Helvetica Neue", Helvetica, Arial, sans-serif; +} +label { + display: block; + margin-bottom: 5px; +} +select, +textarea, +input[type="text"], +input[type="password"], +input[type="datetime"], +input[type="datetime-local"], +input[type="date"], +input[type="month"], +input[type="time"], +input[type="week"], +input[type="number"], +input[type="email"], +input[type="url"], +input[type="search"], +input[type="tel"], +input[type="color"], +.uneditable-input { + display: inline-block; + height: 20px; + padding: 4px 6px; + margin-bottom: 10px; + font-size: 14px; + line-height: 20px; + color: #555555; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; + vertical-align: middle; +} +input, +textarea, +.uneditable-input { + width: 206px; +} +textarea { + height: auto; +} +textarea, +input[type="text"], +input[type="password"], +input[type="datetime"], +input[type="datetime-local"], +input[type="date"], +input[type="month"], +input[type="time"], +input[type="week"], +input[type="number"], +input[type="email"], +input[type="url"], +input[type="search"], +input[type="tel"], +input[type="color"], +.uneditable-input { + background-color: #ffffff; + border: 1px solid #cccccc; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + -webkit-transition: border linear .2s, box-shadow linear .2s; + -moz-transition: border linear .2s, box-shadow linear .2s; + -o-transition: border linear .2s, box-shadow linear .2s; + transition: border linear .2s, box-shadow linear .2s; +} +textarea:focus, +input[type="text"]:focus, +input[type="password"]:focus, +input[type="datetime"]:focus, +input[type="datetime-local"]:focus, +input[type="date"]:focus, +input[type="month"]:focus, +input[type="time"]:focus, +input[type="week"]:focus, +input[type="number"]:focus, +input[type="email"]:focus, +input[type="url"]:focus, +input[type="search"]:focus, +input[type="tel"]:focus, +input[type="color"]:focus, +.uneditable-input:focus { + border-color: rgba(82, 168, 236, 0.8); + outline: 0; + outline: thin dotted \9; + /* IE6-9 */ + + -webkit-box-shadow: inset 0 1px 1px rgba(0,0,0,.075), 0 0 8px rgba(82,168,236,.6); + -moz-box-shadow: inset 0 1px 1px rgba(0,0,0,.075), 0 0 8px rgba(82,168,236,.6); + box-shadow: inset 0 1px 1px rgba(0,0,0,.075), 0 0 8px rgba(82,168,236,.6); +} +input[type="radio"], +input[type="checkbox"] { + margin: 4px 0 0; + *margin-top: 0; + /* IE7 */ + + margin-top: 1px \9; + /* IE8-9 */ + + line-height: normal; +} +input[type="file"], +input[type="image"], +input[type="submit"], +input[type="reset"], +input[type="button"], +input[type="radio"], +input[type="checkbox"] { + width: auto; +} +select, +input[type="file"] { + height: 30px; + /* In IE7, the height of the select element cannot be changed by height, only font-size */ + + *margin-top: 4px; + /* For IE7, add top margin to align select with labels */ + + line-height: 30px; +} +select { + width: 220px; + border: 1px solid #cccccc; + background-color: #ffffff; +} +select[multiple], +select[size] { + height: auto; +} +select:focus, +input[type="file"]:focus, +input[type="radio"]:focus, +input[type="checkbox"]:focus { + outline: thin dotted #333; + outline: 5px auto -webkit-focus-ring-color; + outline-offset: -2px; +} +.uneditable-input, +.uneditable-textarea { + color: #999999; + background-color: #fcfcfc; + border-color: #cccccc; + -webkit-box-shadow: inset 0 1px 2px rgba(0, 0, 0, 0.025); + -moz-box-shadow: inset 0 1px 2px rgba(0, 0, 0, 0.025); + box-shadow: inset 0 1px 2px rgba(0, 0, 0, 0.025); + cursor: not-allowed; +} +.uneditable-input { + overflow: hidden; + white-space: nowrap; +} +.uneditable-textarea { + width: auto; + height: auto; +} +input:-moz-placeholder, +textarea:-moz-placeholder { + color: #999999; +} +input:-ms-input-placeholder, +textarea:-ms-input-placeholder { + color: #999999; +} +input::-webkit-input-placeholder, +textarea::-webkit-input-placeholder { + color: #999999; +} +.radio, +.checkbox { + min-height: 20px; + padding-left: 20px; +} +.radio input[type="radio"], +.checkbox input[type="checkbox"] { + float: left; + margin-left: -20px; +} +.controls > .radio:first-child, +.controls > .checkbox:first-child { + padding-top: 5px; +} +.radio.inline, +.checkbox.inline { + display: inline-block; + padding-top: 5px; + margin-bottom: 0; + vertical-align: middle; +} +.radio.inline + .radio.inline, +.checkbox.inline + .checkbox.inline { + margin-left: 10px; +} +.input-mini { + width: 60px; +} +.input-small { + width: 90px; +} +.input-medium { + width: 150px; +} +.input-large { + width: 210px; +} +.input-xlarge { + width: 270px; +} +.input-xxlarge { + width: 530px; +} +input[class*="span"], +select[class*="span"], +textarea[class*="span"], +.uneditable-input[class*="span"], +.row-fluid input[class*="span"], +.row-fluid select[class*="span"], +.row-fluid textarea[class*="span"], +.row-fluid .uneditable-input[class*="span"] { + float: none; + margin-left: 0; +} +.input-append input[class*="span"], +.input-append .uneditable-input[class*="span"], +.input-prepend input[class*="span"], +.input-prepend .uneditable-input[class*="span"], +.row-fluid input[class*="span"], +.row-fluid select[class*="span"], +.row-fluid textarea[class*="span"], +.row-fluid .uneditable-input[class*="span"], +.row-fluid .input-prepend [class*="span"], +.row-fluid .input-append [class*="span"] { + display: inline-block; +} +input, +textarea, +.uneditable-input { + margin-left: 0; +} +.controls-row [class*="span"] + [class*="span"] { + margin-left: 20px; +} +input.span12, +textarea.span12, +.uneditable-input.span12 { + width: 926px; +} +input.span11, +textarea.span11, +.uneditable-input.span11 { + width: 846px; +} +input.span10, +textarea.span10, +.uneditable-input.span10 { + width: 766px; +} +input.span9, +textarea.span9, +.uneditable-input.span9 { + width: 686px; +} +input.span8, +textarea.span8, +.uneditable-input.span8 { + width: 606px; +} +input.span7, +textarea.span7, +.uneditable-input.span7 { + width: 526px; +} +input.span6, +textarea.span6, +.uneditable-input.span6 { + width: 446px; +} +input.span5, +textarea.span5, +.uneditable-input.span5 { + width: 366px; +} +input.span4, +textarea.span4, +.uneditable-input.span4 { + width: 286px; +} +input.span3, +textarea.span3, +.uneditable-input.span3 { + width: 206px; +} +input.span2, +textarea.span2, +.uneditable-input.span2 { + width: 126px; +} +input.span1, +textarea.span1, +.uneditable-input.span1 { + width: 46px; +} +.controls-row { + *zoom: 1; +} +.controls-row:before, +.controls-row:after { + display: table; + content: ""; + line-height: 0; +} +.controls-row:after { + clear: both; +} +.controls-row [class*="span"], +.row-fluid .controls-row [class*="span"] { + float: left; +} +.controls-row .checkbox[class*="span"], +.controls-row .radio[class*="span"] { + padding-top: 5px; +} +input[disabled], +select[disabled], +textarea[disabled], +input[readonly], +select[readonly], +textarea[readonly] { + cursor: not-allowed; + background-color: #eeeeee; +} +input[type="radio"][disabled], +input[type="checkbox"][disabled], +input[type="radio"][readonly], +input[type="checkbox"][readonly] { + background-color: transparent; +} +.control-group.warning .control-label, +.control-group.warning .help-block, +.control-group.warning .help-inline { + color: #c09853; +} +.control-group.warning .checkbox, +.control-group.warning .radio, +.control-group.warning input, +.control-group.warning select, +.control-group.warning textarea { + color: #c09853; +} +.control-group.warning input, +.control-group.warning select, +.control-group.warning textarea { + border-color: #c09853; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); +} +.control-group.warning input:focus, +.control-group.warning select:focus, +.control-group.warning textarea:focus { + border-color: #a47e3c; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #dbc59e; + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #dbc59e; + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #dbc59e; +} +.control-group.warning .input-prepend .add-on, +.control-group.warning .input-append .add-on { + color: #c09853; + background-color: #fcf8e3; + border-color: #c09853; +} +.control-group.error .control-label, +.control-group.error .help-block, +.control-group.error .help-inline { + color: #b94a48; +} +.control-group.error .checkbox, +.control-group.error .radio, +.control-group.error input, +.control-group.error select, +.control-group.error textarea { + color: #b94a48; +} +.control-group.error input, +.control-group.error select, +.control-group.error textarea { + border-color: #b94a48; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); +} +.control-group.error input:focus, +.control-group.error select:focus, +.control-group.error textarea:focus { + border-color: #953b39; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #d59392; + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #d59392; + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #d59392; +} +.control-group.error .input-prepend .add-on, +.control-group.error .input-append .add-on { + color: #b94a48; + background-color: #f2dede; + border-color: #b94a48; +} +.control-group.success .control-label, +.control-group.success .help-block, +.control-group.success .help-inline { + color: #468847; +} +.control-group.success .checkbox, +.control-group.success .radio, +.control-group.success input, +.control-group.success select, +.control-group.success textarea { + color: #468847; +} +.control-group.success input, +.control-group.success select, +.control-group.success textarea { + border-color: #468847; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); +} +.control-group.success input:focus, +.control-group.success select:focus, +.control-group.success textarea:focus { + border-color: #356635; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #7aba7b; + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #7aba7b; + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #7aba7b; +} +.control-group.success .input-prepend .add-on, +.control-group.success .input-append .add-on { + color: #468847; + background-color: #dff0d8; + border-color: #468847; +} +.control-group.info .control-label, +.control-group.info .help-block, +.control-group.info .help-inline { + color: #3a87ad; +} +.control-group.info .checkbox, +.control-group.info .radio, +.control-group.info input, +.control-group.info select, +.control-group.info textarea { + color: #3a87ad; +} +.control-group.info input, +.control-group.info select, +.control-group.info textarea { + border-color: #3a87ad; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075); +} +.control-group.info input:focus, +.control-group.info select:focus, +.control-group.info textarea:focus { + border-color: #2d6987; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #7ab5d3; + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #7ab5d3; + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.075), 0 0 6px #7ab5d3; +} +.control-group.info .input-prepend .add-on, +.control-group.info .input-append .add-on { + color: #3a87ad; + background-color: #d9edf7; + border-color: #3a87ad; +} +input:focus:invalid, +textarea:focus:invalid, +select:focus:invalid { + color: #b94a48; + border-color: #ee5f5b; +} +input:focus:invalid:focus, +textarea:focus:invalid:focus, +select:focus:invalid:focus { + border-color: #e9322d; + -webkit-box-shadow: 0 0 6px #f8b9b7; + -moz-box-shadow: 0 0 6px #f8b9b7; + box-shadow: 0 0 6px #f8b9b7; +} +.form-actions { + padding: 19px 20px 20px; + margin-top: 20px; + margin-bottom: 20px; + background-color: #f5f5f5; + border-top: 1px solid #e5e5e5; + *zoom: 1; +} +.form-actions:before, +.form-actions:after { + display: table; + content: ""; + line-height: 0; +} +.form-actions:after { + clear: both; +} +.help-block, +.help-inline { + color: #595959; +} +.help-block { + display: block; + margin-bottom: 10px; +} +.help-inline { + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; + vertical-align: middle; + padding-left: 5px; +} +.input-append, +.input-prepend { + display: inline-block; + margin-bottom: 10px; + vertical-align: middle; + font-size: 0; + white-space: nowrap; +} +.input-append input, +.input-prepend input, +.input-append select, +.input-prepend select, +.input-append .uneditable-input, +.input-prepend .uneditable-input, +.input-append .dropdown-menu, +.input-prepend .dropdown-menu, +.input-append .popover, +.input-prepend .popover { + font-size: 14px; +} +.input-append input, +.input-prepend input, +.input-append select, +.input-prepend select, +.input-append .uneditable-input, +.input-prepend .uneditable-input { + position: relative; + margin-bottom: 0; + *margin-left: 0; + vertical-align: top; + -webkit-border-radius: 0 4px 4px 0; + -moz-border-radius: 0 4px 4px 0; + border-radius: 0 4px 4px 0; +} +.input-append input:focus, +.input-prepend input:focus, +.input-append select:focus, +.input-prepend select:focus, +.input-append .uneditable-input:focus, +.input-prepend .uneditable-input:focus { + z-index: 2; +} +.input-append .add-on, +.input-prepend .add-on { + display: inline-block; + width: auto; + height: 20px; + min-width: 16px; + padding: 4px 5px; + font-size: 14px; + font-weight: normal; + line-height: 20px; + text-align: center; + text-shadow: 0 1px 0 #ffffff; + background-color: #eeeeee; + border: 1px solid #ccc; +} +.input-append .add-on, +.input-prepend .add-on, +.input-append .btn, +.input-prepend .btn, +.input-append .btn-group > .dropdown-toggle, +.input-prepend .btn-group > .dropdown-toggle { + vertical-align: top; + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.input-append .active, +.input-prepend .active { + background-color: #a9dba9; + border-color: #46a546; +} +.input-prepend .add-on, +.input-prepend .btn { + margin-right: -1px; +} +.input-prepend .add-on:first-child, +.input-prepend .btn:first-child { + -webkit-border-radius: 4px 0 0 4px; + -moz-border-radius: 4px 0 0 4px; + border-radius: 4px 0 0 4px; +} +.input-append input, +.input-append select, +.input-append .uneditable-input { + -webkit-border-radius: 4px 0 0 4px; + -moz-border-radius: 4px 0 0 4px; + border-radius: 4px 0 0 4px; +} +.input-append input + .btn-group .btn:last-child, +.input-append select + .btn-group .btn:last-child, +.input-append .uneditable-input + .btn-group .btn:last-child { + -webkit-border-radius: 0 4px 4px 0; + -moz-border-radius: 0 4px 4px 0; + border-radius: 0 4px 4px 0; +} +.input-append .add-on, +.input-append .btn, +.input-append .btn-group { + margin-left: -1px; +} +.input-append .add-on:last-child, +.input-append .btn:last-child, +.input-append .btn-group:last-child > .dropdown-toggle { + -webkit-border-radius: 0 4px 4px 0; + -moz-border-radius: 0 4px 4px 0; + border-radius: 0 4px 4px 0; +} +.input-prepend.input-append input, +.input-prepend.input-append select, +.input-prepend.input-append .uneditable-input { + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.input-prepend.input-append input + .btn-group .btn, +.input-prepend.input-append select + .btn-group .btn, +.input-prepend.input-append .uneditable-input + .btn-group .btn { + -webkit-border-radius: 0 4px 4px 0; + -moz-border-radius: 0 4px 4px 0; + border-radius: 0 4px 4px 0; +} +.input-prepend.input-append .add-on:first-child, +.input-prepend.input-append .btn:first-child { + margin-right: -1px; + -webkit-border-radius: 4px 0 0 4px; + -moz-border-radius: 4px 0 0 4px; + border-radius: 4px 0 0 4px; +} +.input-prepend.input-append .add-on:last-child, +.input-prepend.input-append .btn:last-child { + margin-left: -1px; + -webkit-border-radius: 0 4px 4px 0; + -moz-border-radius: 0 4px 4px 0; + border-radius: 0 4px 4px 0; +} +.input-prepend.input-append .btn-group:first-child { + margin-left: 0; +} +input.search-query { + padding-right: 14px; + padding-right: 4px \9; + padding-left: 14px; + padding-left: 4px \9; + /* IE7-8 doesn't have border-radius, so don't indent the padding */ + + margin-bottom: 0; + -webkit-border-radius: 15px; + -moz-border-radius: 15px; + border-radius: 15px; +} +/* Allow for input prepend/append in search forms */ +.form-search .input-append .search-query, +.form-search .input-prepend .search-query { + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.form-search .input-append .search-query { + -webkit-border-radius: 14px 0 0 14px; + -moz-border-radius: 14px 0 0 14px; + border-radius: 14px 0 0 14px; +} +.form-search .input-append .btn { + -webkit-border-radius: 0 14px 14px 0; + -moz-border-radius: 0 14px 14px 0; + border-radius: 0 14px 14px 0; +} +.form-search .input-prepend .search-query { + -webkit-border-radius: 0 14px 14px 0; + -moz-border-radius: 0 14px 14px 0; + border-radius: 0 14px 14px 0; +} +.form-search .input-prepend .btn { + -webkit-border-radius: 14px 0 0 14px; + -moz-border-radius: 14px 0 0 14px; + border-radius: 14px 0 0 14px; +} +.form-search input, +.form-inline input, +.form-horizontal input, +.form-search textarea, +.form-inline textarea, +.form-horizontal textarea, +.form-search select, +.form-inline select, +.form-horizontal select, +.form-search .help-inline, +.form-inline .help-inline, +.form-horizontal .help-inline, +.form-search .uneditable-input, +.form-inline .uneditable-input, +.form-horizontal .uneditable-input, +.form-search .input-prepend, +.form-inline .input-prepend, +.form-horizontal .input-prepend, +.form-search .input-append, +.form-inline .input-append, +.form-horizontal .input-append { + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; + margin-bottom: 0; + vertical-align: middle; +} +.form-search .hide, +.form-inline .hide, +.form-horizontal .hide { + display: none; +} +.form-search label, +.form-inline label, +.form-search .btn-group, +.form-inline .btn-group { + display: inline-block; +} +.form-search .input-append, +.form-inline .input-append, +.form-search .input-prepend, +.form-inline .input-prepend { + margin-bottom: 0; +} +.form-search .radio, +.form-search .checkbox, +.form-inline .radio, +.form-inline .checkbox { + padding-left: 0; + margin-bottom: 0; + vertical-align: middle; +} +.form-search .radio input[type="radio"], +.form-search .checkbox input[type="checkbox"], +.form-inline .radio input[type="radio"], +.form-inline .checkbox input[type="checkbox"] { + float: left; + margin-right: 3px; + margin-left: 0; +} +.control-group { + margin-bottom: 10px; +} +legend + .control-group { + margin-top: 20px; + -webkit-margin-top-collapse: separate; +} +.form-horizontal .control-group { + margin-bottom: 20px; + *zoom: 1; +} +.form-horizontal .control-group:before, +.form-horizontal .control-group:after { + display: table; + content: ""; + line-height: 0; +} +.form-horizontal .control-group:after { + clear: both; +} +.form-horizontal .control-label { + float: left; + width: 160px; + padding-top: 5px; + text-align: right; +} +.form-horizontal .controls { + *display: inline-block; + *padding-left: 20px; + margin-left: 180px; + *margin-left: 0; +} +.form-horizontal .controls:first-child { + *padding-left: 180px; +} +.form-horizontal .help-block { + margin-bottom: 0; +} +.form-horizontal input + .help-block, +.form-horizontal select + .help-block, +.form-horizontal textarea + .help-block, +.form-horizontal .uneditable-input + .help-block, +.form-horizontal .input-prepend + .help-block, +.form-horizontal .input-append + .help-block { + margin-top: 10px; +} +.form-horizontal .form-actions { + padding-left: 180px; +} +table { + max-width: 100%; + background-color: transparent; + border-collapse: collapse; + border-spacing: 0; +} +.table { + width: 100%; + margin-bottom: 20px; +} +.table th, +.table td { + padding: 8px; + line-height: 20px; + text-align: left; + vertical-align: top; + border-top: 1px solid #dddddd; +} +.table th { + font-weight: bold; +} +.table thead th { + vertical-align: bottom; +} +.table caption + thead tr:first-child th, +.table caption + thead tr:first-child td, +.table colgroup + thead tr:first-child th, +.table colgroup + thead tr:first-child td, +.table thead:first-child tr:first-child th, +.table thead:first-child tr:first-child td { + border-top: 0; +} +.table tbody + tbody { + border-top: 2px solid #dddddd; +} +.table .table { + background-color: #ffffff; +} +.table-condensed th, +.table-condensed td { + padding: 4px 5px; +} +.table-bordered { + border: 1px solid #dddddd; + border-collapse: separate; + *border-collapse: collapse; + border-left: 0; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +.table-bordered th, +.table-bordered td { + border-left: 1px solid #dddddd; +} +.table-bordered caption + thead tr:first-child th, +.table-bordered caption + tbody tr:first-child th, +.table-bordered caption + tbody tr:first-child td, +.table-bordered colgroup + thead tr:first-child th, +.table-bordered colgroup + tbody tr:first-child th, +.table-bordered colgroup + tbody tr:first-child td, +.table-bordered thead:first-child tr:first-child th, +.table-bordered tbody:first-child tr:first-child th, +.table-bordered tbody:first-child tr:first-child td { + border-top: 0; +} +.table-bordered thead:first-child tr:first-child > th:first-child, +.table-bordered tbody:first-child tr:first-child > td:first-child, +.table-bordered tbody:first-child tr:first-child > th:first-child { + -webkit-border-top-left-radius: 4px; + -moz-border-radius-topleft: 4px; + border-top-left-radius: 4px; +} +.table-bordered thead:first-child tr:first-child > th:last-child, +.table-bordered tbody:first-child tr:first-child > td:last-child, +.table-bordered tbody:first-child tr:first-child > th:last-child { + -webkit-border-top-right-radius: 4px; + -moz-border-radius-topright: 4px; + border-top-right-radius: 4px; +} +.table-bordered thead:last-child tr:last-child > th:first-child, +.table-bordered tbody:last-child tr:last-child > td:first-child, +.table-bordered tbody:last-child tr:last-child > th:first-child, +.table-bordered tfoot:last-child tr:last-child > td:first-child, +.table-bordered tfoot:last-child tr:last-child > th:first-child { + -webkit-border-bottom-left-radius: 4px; + -moz-border-radius-bottomleft: 4px; + border-bottom-left-radius: 4px; +} +.table-bordered thead:last-child tr:last-child > th:last-child, +.table-bordered tbody:last-child tr:last-child > td:last-child, +.table-bordered tbody:last-child tr:last-child > th:last-child, +.table-bordered tfoot:last-child tr:last-child > td:last-child, +.table-bordered tfoot:last-child tr:last-child > th:last-child { + -webkit-border-bottom-right-radius: 4px; + -moz-border-radius-bottomright: 4px; + border-bottom-right-radius: 4px; +} +.table-bordered tfoot + tbody:last-child tr:last-child td:first-child { + -webkit-border-bottom-left-radius: 0; + -moz-border-radius-bottomleft: 0; + border-bottom-left-radius: 0; +} +.table-bordered tfoot + tbody:last-child tr:last-child td:last-child { + -webkit-border-bottom-right-radius: 0; + -moz-border-radius-bottomright: 0; + border-bottom-right-radius: 0; +} +.table-bordered caption + thead tr:first-child th:first-child, +.table-bordered caption + tbody tr:first-child td:first-child, +.table-bordered colgroup + thead tr:first-child th:first-child, +.table-bordered colgroup + tbody tr:first-child td:first-child { + -webkit-border-top-left-radius: 4px; + -moz-border-radius-topleft: 4px; + border-top-left-radius: 4px; +} +.table-bordered caption + thead tr:first-child th:last-child, +.table-bordered caption + tbody tr:first-child td:last-child, +.table-bordered colgroup + thead tr:first-child th:last-child, +.table-bordered colgroup + tbody tr:first-child td:last-child { + -webkit-border-top-right-radius: 4px; + -moz-border-radius-topright: 4px; + border-top-right-radius: 4px; +} +.table-striped tbody > tr:nth-child(odd) > td, +.table-striped tbody > tr:nth-child(odd) > th { + background-color: #f9f9f9; +} +.table-hover tbody tr:hover > td, +.table-hover tbody tr:hover > th { + background-color: #f5f5f5; +} +table td[class*="span"], +table th[class*="span"], +.row-fluid table td[class*="span"], +.row-fluid table th[class*="span"] { + display: table-cell; + float: none; + margin-left: 0; +} +.table td.span1, +.table th.span1 { + float: none; + width: 44px; + margin-left: 0; +} +.table td.span2, +.table th.span2 { + float: none; + width: 124px; + margin-left: 0; +} +.table td.span3, +.table th.span3 { + float: none; + width: 204px; + margin-left: 0; +} +.table td.span4, +.table th.span4 { + float: none; + width: 284px; + margin-left: 0; +} +.table td.span5, +.table th.span5 { + float: none; + width: 364px; + margin-left: 0; +} +.table td.span6, +.table th.span6 { + float: none; + width: 444px; + margin-left: 0; +} +.table td.span7, +.table th.span7 { + float: none; + width: 524px; + margin-left: 0; +} +.table td.span8, +.table th.span8 { + float: none; + width: 604px; + margin-left: 0; +} +.table td.span9, +.table th.span9 { + float: none; + width: 684px; + margin-left: 0; +} +.table td.span10, +.table th.span10 { + float: none; + width: 764px; + margin-left: 0; +} +.table td.span11, +.table th.span11 { + float: none; + width: 844px; + margin-left: 0; +} +.table td.span12, +.table th.span12 { + float: none; + width: 924px; + margin-left: 0; +} +.table tbody tr.success > td { + background-color: #dff0d8; +} +.table tbody tr.error > td { + background-color: #f2dede; +} +.table tbody tr.warning > td { + background-color: #fcf8e3; +} +.table tbody tr.info > td { + background-color: #d9edf7; +} +.table-hover tbody tr.success:hover > td { + background-color: #d0e9c6; +} +.table-hover tbody tr.error:hover > td { + background-color: #ebcccc; +} +.table-hover tbody tr.warning:hover > td { + background-color: #faf2cc; +} +.table-hover tbody tr.info:hover > td { + background-color: #c4e3f3; +} +[class^="icon-"], +[class*=" icon-"] { + display: inline-block; + width: 14px; + height: 14px; + *margin-right: .3em; + line-height: 14px; + vertical-align: text-top; + background-image: url("../img/glyphicons-halflings.png"); + background-position: 14px 14px; + background-repeat: no-repeat; + margin-top: 1px; +} +/* White icons with optional class, or on hover/focus/active states of certain elements */ +.icon-white, +.nav-pills > .active > a > [class^="icon-"], +.nav-pills > .active > a > [class*=" icon-"], +.nav-list > .active > a > [class^="icon-"], +.nav-list > .active > a > [class*=" icon-"], +.navbar-inverse .nav > .active > a > [class^="icon-"], +.navbar-inverse .nav > .active > a > [class*=" icon-"], +.dropdown-menu > li > a:hover > [class^="icon-"], +.dropdown-menu > li > a:focus > [class^="icon-"], +.dropdown-menu > li > a:hover > [class*=" icon-"], +.dropdown-menu > li > a:focus > [class*=" icon-"], +.dropdown-menu > .active > a > [class^="icon-"], +.dropdown-menu > .active > a > [class*=" icon-"], +.dropdown-submenu:hover > a > [class^="icon-"], +.dropdown-submenu:focus > a > [class^="icon-"], +.dropdown-submenu:hover > a > [class*=" icon-"], +.dropdown-submenu:focus > a > [class*=" icon-"] { + background-image: url("../img/glyphicons-halflings-white.png"); +} +.icon-glass { + background-position: 0 0; +} +.icon-music { + background-position: -24px 0; +} +.icon-search { + background-position: -48px 0; +} +.icon-envelope { + background-position: -72px 0; +} +.icon-heart { + background-position: -96px 0; +} +.icon-star { + background-position: -120px 0; +} +.icon-star-empty { + background-position: -144px 0; +} +.icon-user { + background-position: -168px 0; +} +.icon-film { + background-position: -192px 0; +} +.icon-th-large { + background-position: -216px 0; +} +.icon-th { + background-position: -240px 0; +} +.icon-th-list { + background-position: -264px 0; +} +.icon-ok { + background-position: -288px 0; +} +.icon-remove { + background-position: -312px 0; +} +.icon-zoom-in { + background-position: -336px 0; +} +.icon-zoom-out { + background-position: -360px 0; +} +.icon-off { + background-position: -384px 0; +} +.icon-signal { + background-position: -408px 0; +} +.icon-cog { + background-position: -432px 0; +} +.icon-trash { + background-position: -456px 0; +} +.icon-home { + background-position: 0 -24px; +} +.icon-file { + background-position: -24px -24px; +} +.icon-time { + background-position: -48px -24px; +} +.icon-road { + background-position: -72px -24px; +} +.icon-download-alt { + background-position: -96px -24px; +} +.icon-download { + background-position: -120px -24px; +} +.icon-upload { + background-position: -144px -24px; +} +.icon-inbox { + background-position: -168px -24px; +} +.icon-play-circle { + background-position: -192px -24px; +} +.icon-repeat { + background-position: -216px -24px; +} +.icon-refresh { + background-position: -240px -24px; +} +.icon-list-alt { + background-position: -264px -24px; +} +.icon-lock { + background-position: -287px -24px; +} +.icon-flag { + background-position: -312px -24px; +} +.icon-headphones { + background-position: -336px -24px; +} +.icon-volume-off { + background-position: -360px -24px; +} +.icon-volume-down { + background-position: -384px -24px; +} +.icon-volume-up { + background-position: -408px -24px; +} +.icon-qrcode { + background-position: -432px -24px; +} +.icon-barcode { + background-position: -456px -24px; +} +.icon-tag { + background-position: 0 -48px; +} +.icon-tags { + background-position: -25px -48px; +} +.icon-book { + background-position: -48px -48px; +} +.icon-bookmark { + background-position: -72px -48px; +} +.icon-print { + background-position: -96px -48px; +} +.icon-camera { + background-position: -120px -48px; +} +.icon-font { + background-position: -144px -48px; +} +.icon-bold { + background-position: -167px -48px; +} +.icon-italic { + background-position: -192px -48px; +} +.icon-text-height { + background-position: -216px -48px; +} +.icon-text-width { + background-position: -240px -48px; +} +.icon-align-left { + background-position: -264px -48px; +} +.icon-align-center { + background-position: -288px -48px; +} +.icon-align-right { + background-position: -312px -48px; +} +.icon-align-justify { + background-position: -336px -48px; +} +.icon-list { + background-position: -360px -48px; +} +.icon-indent-left { + background-position: -384px -48px; +} +.icon-indent-right { + background-position: -408px -48px; +} +.icon-facetime-video { + background-position: -432px -48px; +} +.icon-picture { + background-position: -456px -48px; +} +.icon-pencil { + background-position: 0 -72px; +} +.icon-map-marker { + background-position: -24px -72px; +} +.icon-adjust { + background-position: -48px -72px; +} +.icon-tint { + background-position: -72px -72px; +} +.icon-edit { + background-position: -96px -72px; +} +.icon-share { + background-position: -120px -72px; +} +.icon-check { + background-position: -144px -72px; +} +.icon-move { + background-position: -168px -72px; +} +.icon-step-backward { + background-position: -192px -72px; +} +.icon-fast-backward { + background-position: -216px -72px; +} +.icon-backward { + background-position: -240px -72px; +} +.icon-play { + background-position: -264px -72px; +} +.icon-pause { + background-position: -288px -72px; +} +.icon-stop { + background-position: -312px -72px; +} +.icon-forward { + background-position: -336px -72px; +} +.icon-fast-forward { + background-position: -360px -72px; +} +.icon-step-forward { + background-position: -384px -72px; +} +.icon-eject { + background-position: -408px -72px; +} +.icon-chevron-left { + background-position: -432px -72px; +} +.icon-chevron-right { + background-position: -456px -72px; +} +.icon-plus-sign { + background-position: 0 -96px; +} +.icon-minus-sign { + background-position: -24px -96px; +} +.icon-remove-sign { + background-position: -48px -96px; +} +.icon-ok-sign { + background-position: -72px -96px; +} +.icon-question-sign { + background-position: -96px -96px; +} +.icon-info-sign { + background-position: -120px -96px; +} +.icon-screenshot { + background-position: -144px -96px; +} +.icon-remove-circle { + background-position: -168px -96px; +} +.icon-ok-circle { + background-position: -192px -96px; +} +.icon-ban-circle { + background-position: -216px -96px; +} +.icon-arrow-left { + background-position: -240px -96px; +} +.icon-arrow-right { + background-position: -264px -96px; +} +.icon-arrow-up { + background-position: -289px -96px; +} +.icon-arrow-down { + background-position: -312px -96px; +} +.icon-share-alt { + background-position: -336px -96px; +} +.icon-resize-full { + background-position: -360px -96px; +} +.icon-resize-small { + background-position: -384px -96px; +} +.icon-plus { + background-position: -408px -96px; +} +.icon-minus { + background-position: -433px -96px; +} +.icon-asterisk { + background-position: -456px -96px; +} +.icon-exclamation-sign { + background-position: 0 -120px; +} +.icon-gift { + background-position: -24px -120px; +} +.icon-leaf { + background-position: -48px -120px; +} +.icon-fire { + background-position: -72px -120px; +} +.icon-eye-open { + background-position: -96px -120px; +} +.icon-eye-close { + background-position: -120px -120px; +} +.icon-warning-sign { + background-position: -144px -120px; +} +.icon-plane { + background-position: -168px -120px; +} +.icon-calendar { + background-position: -192px -120px; +} +.icon-random { + background-position: -216px -120px; + width: 16px; +} +.icon-comment { + background-position: -240px -120px; +} +.icon-magnet { + background-position: -264px -120px; +} +.icon-chevron-up { + background-position: -288px -120px; +} +.icon-chevron-down { + background-position: -313px -119px; +} +.icon-retweet { + background-position: -336px -120px; +} +.icon-shopping-cart { + background-position: -360px -120px; +} +.icon-folder-close { + background-position: -384px -120px; + width: 16px; +} +.icon-folder-open { + background-position: -408px -120px; + width: 16px; +} +.icon-resize-vertical { + background-position: -432px -119px; +} +.icon-resize-horizontal { + background-position: -456px -118px; +} +.icon-hdd { + background-position: 0 -144px; +} +.icon-bullhorn { + background-position: -24px -144px; +} +.icon-bell { + background-position: -48px -144px; +} +.icon-certificate { + background-position: -72px -144px; +} +.icon-thumbs-up { + background-position: -96px -144px; +} +.icon-thumbs-down { + background-position: -120px -144px; +} +.icon-hand-right { + background-position: -144px -144px; +} +.icon-hand-left { + background-position: -168px -144px; +} +.icon-hand-up { + background-position: -192px -144px; +} +.icon-hand-down { + background-position: -216px -144px; +} +.icon-circle-arrow-right { + background-position: -240px -144px; +} +.icon-circle-arrow-left { + background-position: -264px -144px; +} +.icon-circle-arrow-up { + background-position: -288px -144px; +} +.icon-circle-arrow-down { + background-position: -312px -144px; +} +.icon-globe { + background-position: -336px -144px; +} +.icon-wrench { + background-position: -360px -144px; +} +.icon-tasks { + background-position: -384px -144px; +} +.icon-filter { + background-position: -408px -144px; +} +.icon-briefcase { + background-position: -432px -144px; +} +.icon-fullscreen { + background-position: -456px -144px; +} +.dropup, +.dropdown { + position: relative; +} +.dropdown-toggle { + *margin-bottom: -3px; +} +.dropdown-toggle:active, +.open .dropdown-toggle { + outline: 0; +} +.caret { + display: inline-block; + width: 0; + height: 0; + vertical-align: top; + border-top: 4px solid #000000; + border-right: 4px solid transparent; + border-left: 4px solid transparent; + content: ""; +} +.dropdown .caret { + margin-top: 8px; + margin-left: 2px; +} +.dropdown-menu { + position: absolute; + top: 100%; + left: 0; + z-index: 1000; + display: none; + float: left; + min-width: 160px; + padding: 5px 0; + margin: 2px 0 0; + list-style: none; + background-color: #ffffff; + border: 1px solid #ccc; + border: 1px solid rgba(0, 0, 0, 0.2); + *border-right-width: 2px; + *border-bottom-width: 2px; + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; + -webkit-box-shadow: 0 5px 10px rgba(0, 0, 0, 0.2); + -moz-box-shadow: 0 5px 10px rgba(0, 0, 0, 0.2); + box-shadow: 0 5px 10px rgba(0, 0, 0, 0.2); + -webkit-background-clip: padding-box; + -moz-background-clip: padding; + background-clip: padding-box; +} +.dropdown-menu.pull-right { + right: 0; + left: auto; +} +.dropdown-menu .divider { + *width: 100%; + height: 1px; + margin: 9px 1px; + *margin: -5px 0 5px; + overflow: hidden; + background-color: #e5e5e5; + border-bottom: 1px solid #ffffff; +} +.dropdown-menu > li > a { + display: block; + padding: 3px 20px; + clear: both; + font-weight: normal; + line-height: 20px; + color: #333333; + white-space: nowrap; +} +.dropdown-menu > li > a:hover, +.dropdown-menu > li > a:focus, +.dropdown-submenu:hover > a, +.dropdown-submenu:focus > a { + text-decoration: none; + color: #ffffff; + background-color: #0081c2; + background-image: -moz-linear-gradient(top, #0088cc, #0077b3); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#0088cc), to(#0077b3)); + background-image: -webkit-linear-gradient(top, #0088cc, #0077b3); + background-image: -o-linear-gradient(top, #0088cc, #0077b3); + background-image: linear-gradient(to bottom, #0088cc, #0077b3); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff0088cc', endColorstr='#ff0077b3', GradientType=0); +} +.dropdown-menu > .active > a, +.dropdown-menu > .active > a:hover, +.dropdown-menu > .active > a:focus { + color: #ffffff; + text-decoration: none; + outline: 0; + background-color: #0081c2; + background-image: -moz-linear-gradient(top, #0088cc, #0077b3); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#0088cc), to(#0077b3)); + background-image: -webkit-linear-gradient(top, #0088cc, #0077b3); + background-image: -o-linear-gradient(top, #0088cc, #0077b3); + background-image: linear-gradient(to bottom, #0088cc, #0077b3); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff0088cc', endColorstr='#ff0077b3', GradientType=0); +} +.dropdown-menu > .disabled > a, +.dropdown-menu > .disabled > a:hover, +.dropdown-menu > .disabled > a:focus { + color: #999999; +} +.dropdown-menu > .disabled > a:hover, +.dropdown-menu > .disabled > a:focus { + text-decoration: none; + background-color: transparent; + background-image: none; + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); + cursor: default; +} +.open { + *z-index: 1000; +} +.open > .dropdown-menu { + display: block; +} +.dropdown-backdrop { + position: fixed; + left: 0; + right: 0; + bottom: 0; + top: 0; + z-index: 990; +} +.pull-right > .dropdown-menu { + right: 0; + left: auto; +} +.dropup .caret, +.navbar-fixed-bottom .dropdown .caret { + border-top: 0; + border-bottom: 4px solid #000000; + content: ""; +} +.dropup .dropdown-menu, +.navbar-fixed-bottom .dropdown .dropdown-menu { + top: auto; + bottom: 100%; + margin-bottom: 1px; +} +.dropdown-submenu { + position: relative; +} +.dropdown-submenu > .dropdown-menu { + top: 0; + left: 100%; + margin-top: -6px; + margin-left: -1px; + -webkit-border-radius: 0 6px 6px 6px; + -moz-border-radius: 0 6px 6px 6px; + border-radius: 0 6px 6px 6px; +} +.dropdown-submenu:hover > .dropdown-menu { + display: block; +} +.dropup .dropdown-submenu > .dropdown-menu { + top: auto; + bottom: 0; + margin-top: 0; + margin-bottom: -2px; + -webkit-border-radius: 5px 5px 5px 0; + -moz-border-radius: 5px 5px 5px 0; + border-radius: 5px 5px 5px 0; +} +.dropdown-submenu > a:after { + display: block; + content: " "; + float: right; + width: 0; + height: 0; + border-color: transparent; + border-style: solid; + border-width: 5px 0 5px 5px; + border-left-color: #cccccc; + margin-top: 5px; + margin-right: -10px; +} +.dropdown-submenu:hover > a:after { + border-left-color: #ffffff; +} +.dropdown-submenu.pull-left { + float: none; +} +.dropdown-submenu.pull-left > .dropdown-menu { + left: -100%; + margin-left: 10px; + -webkit-border-radius: 6px 0 6px 6px; + -moz-border-radius: 6px 0 6px 6px; + border-radius: 6px 0 6px 6px; +} +.dropdown .dropdown-menu .nav-header { + padding-left: 20px; + padding-right: 20px; +} +.typeahead { + z-index: 1051; + margin-top: 2px; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +.well { + min-height: 20px; + padding: 19px; + margin-bottom: 20px; + background-color: #f5f5f5; + border: 1px solid #e3e3e3; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; + -webkit-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.05); + -moz-box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.05); + box-shadow: inset 0 1px 1px rgba(0, 0, 0, 0.05); +} +.well blockquote { + border-color: #ddd; + border-color: rgba(0, 0, 0, 0.15); +} +.well-large { + padding: 24px; + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; +} +.well-small { + padding: 9px; + -webkit-border-radius: 3px; + -moz-border-radius: 3px; + border-radius: 3px; +} +.fade { + opacity: 0; + -webkit-transition: opacity 0.15s linear; + -moz-transition: opacity 0.15s linear; + -o-transition: opacity 0.15s linear; + transition: opacity 0.15s linear; +} +.fade.in { + opacity: 1; +} +.collapse { + position: relative; + height: 0; + overflow: hidden; + -webkit-transition: height 0.35s ease; + -moz-transition: height 0.35s ease; + -o-transition: height 0.35s ease; + transition: height 0.35s ease; +} +.collapse.in { + height: auto; +} +.close { + float: right; + font-size: 20px; + font-weight: bold; + line-height: 20px; + color: #000000; + text-shadow: 0 1px 0 #ffffff; + opacity: 0.2; + filter: alpha(opacity=20); +} +.close:hover, +.close:focus { + color: #000000; + text-decoration: none; + cursor: pointer; + opacity: 0.4; + filter: alpha(opacity=40); +} +button.close { + padding: 0; + cursor: pointer; + background: transparent; + border: 0; + -webkit-appearance: none; +} +.btn { + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; + padding: 4px 12px; + margin-bottom: 0; + font-size: 14px; + line-height: 20px; + text-align: center; + vertical-align: middle; + cursor: pointer; + color: #333333; + text-shadow: 0 1px 1px rgba(255, 255, 255, 0.75); + background-color: #f5f5f5; + background-image: -moz-linear-gradient(top, #ffffff, #e6e6e6); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#ffffff), to(#e6e6e6)); + background-image: -webkit-linear-gradient(top, #ffffff, #e6e6e6); + background-image: -o-linear-gradient(top, #ffffff, #e6e6e6); + background-image: linear-gradient(to bottom, #ffffff, #e6e6e6); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ffffffff', endColorstr='#ffe6e6e6', GradientType=0); + border-color: #e6e6e6 #e6e6e6 #bfbfbf; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #e6e6e6; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); + border: 1px solid #cccccc; + *border: 0; + border-bottom-color: #b3b3b3; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; + *margin-left: .3em; + -webkit-box-shadow: inset 0 1px 0 rgba(255,255,255,.2), 0 1px 2px rgba(0,0,0,.05); + -moz-box-shadow: inset 0 1px 0 rgba(255,255,255,.2), 0 1px 2px rgba(0,0,0,.05); + box-shadow: inset 0 1px 0 rgba(255,255,255,.2), 0 1px 2px rgba(0,0,0,.05); +} +.btn:hover, +.btn:focus, +.btn:active, +.btn.active, +.btn.disabled, +.btn[disabled] { + color: #333333; + background-color: #e6e6e6; + *background-color: #d9d9d9; +} +.btn:active, +.btn.active { + background-color: #cccccc \9; +} +.btn:first-child { + *margin-left: 0; +} +.btn:hover, +.btn:focus { + color: #333333; + text-decoration: none; + background-position: 0 -15px; + -webkit-transition: background-position 0.1s linear; + -moz-transition: background-position 0.1s linear; + -o-transition: background-position 0.1s linear; + transition: background-position 0.1s linear; +} +.btn:focus { + outline: thin dotted #333; + outline: 5px auto -webkit-focus-ring-color; + outline-offset: -2px; +} +.btn.active, +.btn:active { + background-image: none; + outline: 0; + -webkit-box-shadow: inset 0 2px 4px rgba(0,0,0,.15), 0 1px 2px rgba(0,0,0,.05); + -moz-box-shadow: inset 0 2px 4px rgba(0,0,0,.15), 0 1px 2px rgba(0,0,0,.05); + box-shadow: inset 0 2px 4px rgba(0,0,0,.15), 0 1px 2px rgba(0,0,0,.05); +} +.btn.disabled, +.btn[disabled] { + cursor: default; + background-image: none; + opacity: 0.65; + filter: alpha(opacity=65); + -webkit-box-shadow: none; + -moz-box-shadow: none; + box-shadow: none; +} +.btn-large { + padding: 11px 19px; + font-size: 17.5px; + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; +} +.btn-large [class^="icon-"], +.btn-large [class*=" icon-"] { + margin-top: 4px; +} +.btn-small { + padding: 2px 10px; + font-size: 11.9px; + -webkit-border-radius: 3px; + -moz-border-radius: 3px; + border-radius: 3px; +} +.btn-small [class^="icon-"], +.btn-small [class*=" icon-"] { + margin-top: 0; +} +.btn-mini [class^="icon-"], +.btn-mini [class*=" icon-"] { + margin-top: -1px; +} +.btn-mini { + padding: 0 6px; + font-size: 10.5px; + -webkit-border-radius: 3px; + -moz-border-radius: 3px; + border-radius: 3px; +} +.btn-block { + display: block; + width: 100%; + padding-left: 0; + padding-right: 0; + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; +} +.btn-block + .btn-block { + margin-top: 5px; +} +input[type="submit"].btn-block, +input[type="reset"].btn-block, +input[type="button"].btn-block { + width: 100%; +} +.btn-primary.active, +.btn-warning.active, +.btn-danger.active, +.btn-success.active, +.btn-info.active, +.btn-inverse.active { + color: rgba(255, 255, 255, 0.75); +} +.btn-primary { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #006dcc; + background-image: -moz-linear-gradient(top, #0088cc, #0044cc); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#0088cc), to(#0044cc)); + background-image: -webkit-linear-gradient(top, #0088cc, #0044cc); + background-image: -o-linear-gradient(top, #0088cc, #0044cc); + background-image: linear-gradient(to bottom, #0088cc, #0044cc); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff0088cc', endColorstr='#ff0044cc', GradientType=0); + border-color: #0044cc #0044cc #002a80; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #0044cc; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); +} +.btn-primary:hover, +.btn-primary:focus, +.btn-primary:active, +.btn-primary.active, +.btn-primary.disabled, +.btn-primary[disabled] { + color: #ffffff; + background-color: #0044cc; + *background-color: #003bb3; +} +.btn-primary:active, +.btn-primary.active { + background-color: #003399 \9; +} +.btn-warning { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #faa732; + background-image: -moz-linear-gradient(top, #fbb450, #f89406); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#fbb450), to(#f89406)); + background-image: -webkit-linear-gradient(top, #fbb450, #f89406); + background-image: -o-linear-gradient(top, #fbb450, #f89406); + background-image: linear-gradient(to bottom, #fbb450, #f89406); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#fffbb450', endColorstr='#fff89406', GradientType=0); + border-color: #f89406 #f89406 #ad6704; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #f89406; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); +} +.btn-warning:hover, +.btn-warning:focus, +.btn-warning:active, +.btn-warning.active, +.btn-warning.disabled, +.btn-warning[disabled] { + color: #ffffff; + background-color: #f89406; + *background-color: #df8505; +} +.btn-warning:active, +.btn-warning.active { + background-color: #c67605 \9; +} +.btn-danger { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #da4f49; + background-image: -moz-linear-gradient(top, #ee5f5b, #bd362f); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#ee5f5b), to(#bd362f)); + background-image: -webkit-linear-gradient(top, #ee5f5b, #bd362f); + background-image: -o-linear-gradient(top, #ee5f5b, #bd362f); + background-image: linear-gradient(to bottom, #ee5f5b, #bd362f); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ffee5f5b', endColorstr='#ffbd362f', GradientType=0); + border-color: #bd362f #bd362f #802420; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #bd362f; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); +} +.btn-danger:hover, +.btn-danger:focus, +.btn-danger:active, +.btn-danger.active, +.btn-danger.disabled, +.btn-danger[disabled] { + color: #ffffff; + background-color: #bd362f; + *background-color: #a9302a; +} +.btn-danger:active, +.btn-danger.active { + background-color: #942a25 \9; +} +.btn-success { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #5bb75b; + background-image: -moz-linear-gradient(top, #62c462, #51a351); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#62c462), to(#51a351)); + background-image: -webkit-linear-gradient(top, #62c462, #51a351); + background-image: -o-linear-gradient(top, #62c462, #51a351); + background-image: linear-gradient(to bottom, #62c462, #51a351); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff62c462', endColorstr='#ff51a351', GradientType=0); + border-color: #51a351 #51a351 #387038; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #51a351; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); +} +.btn-success:hover, +.btn-success:focus, +.btn-success:active, +.btn-success.active, +.btn-success.disabled, +.btn-success[disabled] { + color: #ffffff; + background-color: #51a351; + *background-color: #499249; +} +.btn-success:active, +.btn-success.active { + background-color: #408140 \9; +} +.btn-info { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #49afcd; + background-image: -moz-linear-gradient(top, #5bc0de, #2f96b4); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#5bc0de), to(#2f96b4)); + background-image: -webkit-linear-gradient(top, #5bc0de, #2f96b4); + background-image: -o-linear-gradient(top, #5bc0de, #2f96b4); + background-image: linear-gradient(to bottom, #5bc0de, #2f96b4); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff5bc0de', endColorstr='#ff2f96b4', GradientType=0); + border-color: #2f96b4 #2f96b4 #1f6377; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #2f96b4; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); +} +.btn-info:hover, +.btn-info:focus, +.btn-info:active, +.btn-info.active, +.btn-info.disabled, +.btn-info[disabled] { + color: #ffffff; + background-color: #2f96b4; + *background-color: #2a85a0; +} +.btn-info:active, +.btn-info.active { + background-color: #24748c \9; +} +.btn-inverse { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #363636; + background-image: -moz-linear-gradient(top, #444444, #222222); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#444444), to(#222222)); + background-image: -webkit-linear-gradient(top, #444444, #222222); + background-image: -o-linear-gradient(top, #444444, #222222); + background-image: linear-gradient(to bottom, #444444, #222222); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff444444', endColorstr='#ff222222', GradientType=0); + border-color: #222222 #222222 #000000; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #222222; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); +} +.btn-inverse:hover, +.btn-inverse:focus, +.btn-inverse:active, +.btn-inverse.active, +.btn-inverse.disabled, +.btn-inverse[disabled] { + color: #ffffff; + background-color: #222222; + *background-color: #151515; +} +.btn-inverse:active, +.btn-inverse.active { + background-color: #080808 \9; +} +button.btn, +input[type="submit"].btn { + *padding-top: 3px; + *padding-bottom: 3px; +} +button.btn::-moz-focus-inner, +input[type="submit"].btn::-moz-focus-inner { + padding: 0; + border: 0; +} +button.btn.btn-large, +input[type="submit"].btn.btn-large { + *padding-top: 7px; + *padding-bottom: 7px; +} +button.btn.btn-small, +input[type="submit"].btn.btn-small { + *padding-top: 3px; + *padding-bottom: 3px; +} +button.btn.btn-mini, +input[type="submit"].btn.btn-mini { + *padding-top: 1px; + *padding-bottom: 1px; +} +.btn-link, +.btn-link:active, +.btn-link[disabled] { + background-color: transparent; + background-image: none; + -webkit-box-shadow: none; + -moz-box-shadow: none; + box-shadow: none; +} +.btn-link { + border-color: transparent; + cursor: pointer; + color: #0088cc; + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.btn-link:hover, +.btn-link:focus { + color: #005580; + text-decoration: underline; + background-color: transparent; +} +.btn-link[disabled]:hover, +.btn-link[disabled]:focus { + color: #333333; + text-decoration: none; +} +.btn-group { + position: relative; + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; + font-size: 0; + vertical-align: middle; + white-space: nowrap; + *margin-left: .3em; +} +.btn-group:first-child { + *margin-left: 0; +} +.btn-group + .btn-group { + margin-left: 5px; +} +.btn-toolbar { + font-size: 0; + margin-top: 10px; + margin-bottom: 10px; +} +.btn-toolbar > .btn + .btn, +.btn-toolbar > .btn-group + .btn, +.btn-toolbar > .btn + .btn-group { + margin-left: 5px; +} +.btn-group > .btn { + position: relative; + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.btn-group > .btn + .btn { + margin-left: -1px; +} +.btn-group > .btn, +.btn-group > .dropdown-menu, +.btn-group > .popover { + font-size: 14px; +} +.btn-group > .btn-mini { + font-size: 10.5px; +} +.btn-group > .btn-small { + font-size: 11.9px; +} +.btn-group > .btn-large { + font-size: 17.5px; +} +.btn-group > .btn:first-child { + margin-left: 0; + -webkit-border-top-left-radius: 4px; + -moz-border-radius-topleft: 4px; + border-top-left-radius: 4px; + -webkit-border-bottom-left-radius: 4px; + -moz-border-radius-bottomleft: 4px; + border-bottom-left-radius: 4px; +} +.btn-group > .btn:last-child, +.btn-group > .dropdown-toggle { + -webkit-border-top-right-radius: 4px; + -moz-border-radius-topright: 4px; + border-top-right-radius: 4px; + -webkit-border-bottom-right-radius: 4px; + -moz-border-radius-bottomright: 4px; + border-bottom-right-radius: 4px; +} +.btn-group > .btn.large:first-child { + margin-left: 0; + -webkit-border-top-left-radius: 6px; + -moz-border-radius-topleft: 6px; + border-top-left-radius: 6px; + -webkit-border-bottom-left-radius: 6px; + -moz-border-radius-bottomleft: 6px; + border-bottom-left-radius: 6px; +} +.btn-group > .btn.large:last-child, +.btn-group > .large.dropdown-toggle { + -webkit-border-top-right-radius: 6px; + -moz-border-radius-topright: 6px; + border-top-right-radius: 6px; + -webkit-border-bottom-right-radius: 6px; + -moz-border-radius-bottomright: 6px; + border-bottom-right-radius: 6px; +} +.btn-group > .btn:hover, +.btn-group > .btn:focus, +.btn-group > .btn:active, +.btn-group > .btn.active { + z-index: 2; +} +.btn-group .dropdown-toggle:active, +.btn-group.open .dropdown-toggle { + outline: 0; +} +.btn-group > .btn + .dropdown-toggle { + padding-left: 8px; + padding-right: 8px; + -webkit-box-shadow: inset 1px 0 0 rgba(255,255,255,.125), inset 0 1px 0 rgba(255,255,255,.2), 0 1px 2px rgba(0,0,0,.05); + -moz-box-shadow: inset 1px 0 0 rgba(255,255,255,.125), inset 0 1px 0 rgba(255,255,255,.2), 0 1px 2px rgba(0,0,0,.05); + box-shadow: inset 1px 0 0 rgba(255,255,255,.125), inset 0 1px 0 rgba(255,255,255,.2), 0 1px 2px rgba(0,0,0,.05); + *padding-top: 5px; + *padding-bottom: 5px; +} +.btn-group > .btn-mini + .dropdown-toggle { + padding-left: 5px; + padding-right: 5px; + *padding-top: 2px; + *padding-bottom: 2px; +} +.btn-group > .btn-small + .dropdown-toggle { + *padding-top: 5px; + *padding-bottom: 4px; +} +.btn-group > .btn-large + .dropdown-toggle { + padding-left: 12px; + padding-right: 12px; + *padding-top: 7px; + *padding-bottom: 7px; +} +.btn-group.open .dropdown-toggle { + background-image: none; + -webkit-box-shadow: inset 0 2px 4px rgba(0,0,0,.15), 0 1px 2px rgba(0,0,0,.05); + -moz-box-shadow: inset 0 2px 4px rgba(0,0,0,.15), 0 1px 2px rgba(0,0,0,.05); + box-shadow: inset 0 2px 4px rgba(0,0,0,.15), 0 1px 2px rgba(0,0,0,.05); +} +.btn-group.open .btn.dropdown-toggle { + background-color: #e6e6e6; +} +.btn-group.open .btn-primary.dropdown-toggle { + background-color: #0044cc; +} +.btn-group.open .btn-warning.dropdown-toggle { + background-color: #f89406; +} +.btn-group.open .btn-danger.dropdown-toggle { + background-color: #bd362f; +} +.btn-group.open .btn-success.dropdown-toggle { + background-color: #51a351; +} +.btn-group.open .btn-info.dropdown-toggle { + background-color: #2f96b4; +} +.btn-group.open .btn-inverse.dropdown-toggle { + background-color: #222222; +} +.btn .caret { + margin-top: 8px; + margin-left: 0; +} +.btn-large .caret { + margin-top: 6px; +} +.btn-large .caret { + border-left-width: 5px; + border-right-width: 5px; + border-top-width: 5px; +} +.btn-mini .caret, +.btn-small .caret { + margin-top: 8px; +} +.dropup .btn-large .caret { + border-bottom-width: 5px; +} +.btn-primary .caret, +.btn-warning .caret, +.btn-danger .caret, +.btn-info .caret, +.btn-success .caret, +.btn-inverse .caret { + border-top-color: #ffffff; + border-bottom-color: #ffffff; +} +.btn-group-vertical { + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; +} +.btn-group-vertical > .btn { + display: block; + float: none; + max-width: 100%; + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.btn-group-vertical > .btn + .btn { + margin-left: 0; + margin-top: -1px; +} +.btn-group-vertical > .btn:first-child { + -webkit-border-radius: 4px 4px 0 0; + -moz-border-radius: 4px 4px 0 0; + border-radius: 4px 4px 0 0; +} +.btn-group-vertical > .btn:last-child { + -webkit-border-radius: 0 0 4px 4px; + -moz-border-radius: 0 0 4px 4px; + border-radius: 0 0 4px 4px; +} +.btn-group-vertical > .btn-large:first-child { + -webkit-border-radius: 6px 6px 0 0; + -moz-border-radius: 6px 6px 0 0; + border-radius: 6px 6px 0 0; +} +.btn-group-vertical > .btn-large:last-child { + -webkit-border-radius: 0 0 6px 6px; + -moz-border-radius: 0 0 6px 6px; + border-radius: 0 0 6px 6px; +} +.alert { + padding: 8px 35px 8px 14px; + margin-bottom: 20px; + text-shadow: 0 1px 0 rgba(255, 255, 255, 0.5); + background-color: #fcf8e3; + border: 1px solid #fbeed5; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +.alert, +.alert h4 { + color: #c09853; +} +.alert h4 { + margin: 0; +} +.alert .close { + position: relative; + top: -2px; + right: -21px; + line-height: 20px; +} +.alert-success { + background-color: #dff0d8; + border-color: #d6e9c6; + color: #468847; +} +.alert-success h4 { + color: #468847; +} +.alert-danger, +.alert-error { + background-color: #f2dede; + border-color: #eed3d7; + color: #b94a48; +} +.alert-danger h4, +.alert-error h4 { + color: #b94a48; +} +.alert-info { + background-color: #d9edf7; + border-color: #bce8f1; + color: #3a87ad; +} +.alert-info h4 { + color: #3a87ad; +} +.alert-block { + padding-top: 14px; + padding-bottom: 14px; +} +.alert-block > p, +.alert-block > ul { + margin-bottom: 0; +} +.alert-block p + p { + margin-top: 5px; +} +.nav { + margin-left: 0; + margin-bottom: 20px; + list-style: none; +} +.nav > li > a { + display: block; +} +.nav > li > a:hover, +.nav > li > a:focus { + text-decoration: none; + background-color: #eeeeee; +} +.nav > li > a > img { + max-width: none; +} +.nav > .pull-right { + float: right; +} +.nav-header { + display: block; + padding: 3px 15px; + font-size: 11px; + font-weight: bold; + line-height: 20px; + color: #999999; + text-shadow: 0 1px 0 rgba(255, 255, 255, 0.5); + text-transform: uppercase; +} +.nav li + .nav-header { + margin-top: 9px; +} +.nav-list { + padding-left: 15px; + padding-right: 15px; + margin-bottom: 0; +} +.nav-list > li > a, +.nav-list .nav-header { + margin-left: -15px; + margin-right: -15px; + text-shadow: 0 1px 0 rgba(255, 255, 255, 0.5); +} +.nav-list > li > a { + padding: 3px 15px; +} +.nav-list > .active > a, +.nav-list > .active > a:hover, +.nav-list > .active > a:focus { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.2); + background-color: #0088cc; +} +.nav-list [class^="icon-"], +.nav-list [class*=" icon-"] { + margin-right: 2px; +} +.nav-list .divider { + *width: 100%; + height: 1px; + margin: 9px 1px; + *margin: -5px 0 5px; + overflow: hidden; + background-color: #e5e5e5; + border-bottom: 1px solid #ffffff; +} +.nav-tabs, +.nav-pills { + *zoom: 1; +} +.nav-tabs:before, +.nav-pills:before, +.nav-tabs:after, +.nav-pills:after { + display: table; + content: ""; + line-height: 0; +} +.nav-tabs:after, +.nav-pills:after { + clear: both; +} +.nav-tabs > li, +.nav-pills > li { + float: left; +} +.nav-tabs > li > a, +.nav-pills > li > a { + padding-right: 12px; + padding-left: 12px; + margin-right: 2px; + line-height: 14px; +} +.nav-tabs { + border-bottom: 1px solid #ddd; +} +.nav-tabs > li { + margin-bottom: -1px; +} +.nav-tabs > li > a { + padding-top: 8px; + padding-bottom: 8px; + line-height: 20px; + border: 1px solid transparent; + -webkit-border-radius: 4px 4px 0 0; + -moz-border-radius: 4px 4px 0 0; + border-radius: 4px 4px 0 0; +} +.nav-tabs > li > a:hover, +.nav-tabs > li > a:focus { + border-color: #eeeeee #eeeeee #dddddd; +} +.nav-tabs > .active > a, +.nav-tabs > .active > a:hover, +.nav-tabs > .active > a:focus { + color: #555555; + background-color: #ffffff; + border: 1px solid #ddd; + border-bottom-color: transparent; + cursor: default; +} +.nav-pills > li > a { + padding-top: 8px; + padding-bottom: 8px; + margin-top: 2px; + margin-bottom: 2px; + -webkit-border-radius: 5px; + -moz-border-radius: 5px; + border-radius: 5px; +} +.nav-pills > .active > a, +.nav-pills > .active > a:hover, +.nav-pills > .active > a:focus { + color: #ffffff; + background-color: #0088cc; +} +.nav-stacked > li { + float: none; +} +.nav-stacked > li > a { + margin-right: 0; +} +.nav-tabs.nav-stacked { + border-bottom: 0; +} +.nav-tabs.nav-stacked > li > a { + border: 1px solid #ddd; + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.nav-tabs.nav-stacked > li:first-child > a { + -webkit-border-top-right-radius: 4px; + -moz-border-radius-topright: 4px; + border-top-right-radius: 4px; + -webkit-border-top-left-radius: 4px; + -moz-border-radius-topleft: 4px; + border-top-left-radius: 4px; +} +.nav-tabs.nav-stacked > li:last-child > a { + -webkit-border-bottom-right-radius: 4px; + -moz-border-radius-bottomright: 4px; + border-bottom-right-radius: 4px; + -webkit-border-bottom-left-radius: 4px; + -moz-border-radius-bottomleft: 4px; + border-bottom-left-radius: 4px; +} +.nav-tabs.nav-stacked > li > a:hover, +.nav-tabs.nav-stacked > li > a:focus { + border-color: #ddd; + z-index: 2; +} +.nav-pills.nav-stacked > li > a { + margin-bottom: 3px; +} +.nav-pills.nav-stacked > li:last-child > a { + margin-bottom: 1px; +} +.nav-tabs .dropdown-menu { + -webkit-border-radius: 0 0 6px 6px; + -moz-border-radius: 0 0 6px 6px; + border-radius: 0 0 6px 6px; +} +.nav-pills .dropdown-menu { + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; +} +.nav .dropdown-toggle .caret { + border-top-color: #0088cc; + border-bottom-color: #0088cc; + margin-top: 6px; +} +.nav .dropdown-toggle:hover .caret, +.nav .dropdown-toggle:focus .caret { + border-top-color: #005580; + border-bottom-color: #005580; +} +/* move down carets for tabs */ +.nav-tabs .dropdown-toggle .caret { + margin-top: 8px; +} +.nav .active .dropdown-toggle .caret { + border-top-color: #fff; + border-bottom-color: #fff; +} +.nav-tabs .active .dropdown-toggle .caret { + border-top-color: #555555; + border-bottom-color: #555555; +} +.nav > .dropdown.active > a:hover, +.nav > .dropdown.active > a:focus { + cursor: pointer; +} +.nav-tabs .open .dropdown-toggle, +.nav-pills .open .dropdown-toggle, +.nav > li.dropdown.open.active > a:hover, +.nav > li.dropdown.open.active > a:focus { + color: #ffffff; + background-color: #999999; + border-color: #999999; +} +.nav li.dropdown.open .caret, +.nav li.dropdown.open.active .caret, +.nav li.dropdown.open a:hover .caret, +.nav li.dropdown.open a:focus .caret { + border-top-color: #ffffff; + border-bottom-color: #ffffff; + opacity: 1; + filter: alpha(opacity=100); +} +.tabs-stacked .open > a:hover, +.tabs-stacked .open > a:focus { + border-color: #999999; +} +.tabbable { + *zoom: 1; +} +.tabbable:before, +.tabbable:after { + display: table; + content: ""; + line-height: 0; +} +.tabbable:after { + clear: both; +} +.tab-content { + overflow: auto; +} +.tabs-below > .nav-tabs, +.tabs-right > .nav-tabs, +.tabs-left > .nav-tabs { + border-bottom: 0; +} +.tab-content > .tab-pane, +.pill-content > .pill-pane { + display: none; +} +.tab-content > .active, +.pill-content > .active { + display: block; +} +.tabs-below > .nav-tabs { + border-top: 1px solid #ddd; +} +.tabs-below > .nav-tabs > li { + margin-top: -1px; + margin-bottom: 0; +} +.tabs-below > .nav-tabs > li > a { + -webkit-border-radius: 0 0 4px 4px; + -moz-border-radius: 0 0 4px 4px; + border-radius: 0 0 4px 4px; +} +.tabs-below > .nav-tabs > li > a:hover, +.tabs-below > .nav-tabs > li > a:focus { + border-bottom-color: transparent; + border-top-color: #ddd; +} +.tabs-below > .nav-tabs > .active > a, +.tabs-below > .nav-tabs > .active > a:hover, +.tabs-below > .nav-tabs > .active > a:focus { + border-color: transparent #ddd #ddd #ddd; +} +.tabs-left > .nav-tabs > li, +.tabs-right > .nav-tabs > li { + float: none; +} +.tabs-left > .nav-tabs > li > a, +.tabs-right > .nav-tabs > li > a { + min-width: 74px; + margin-right: 0; + margin-bottom: 3px; +} +.tabs-left > .nav-tabs { + float: left; + margin-right: 19px; + border-right: 1px solid #ddd; +} +.tabs-left > .nav-tabs > li > a { + margin-right: -1px; + -webkit-border-radius: 4px 0 0 4px; + -moz-border-radius: 4px 0 0 4px; + border-radius: 4px 0 0 4px; +} +.tabs-left > .nav-tabs > li > a:hover, +.tabs-left > .nav-tabs > li > a:focus { + border-color: #eeeeee #dddddd #eeeeee #eeeeee; +} +.tabs-left > .nav-tabs .active > a, +.tabs-left > .nav-tabs .active > a:hover, +.tabs-left > .nav-tabs .active > a:focus { + border-color: #ddd transparent #ddd #ddd; + *border-right-color: #ffffff; +} +.tabs-right > .nav-tabs { + float: right; + margin-left: 19px; + border-left: 1px solid #ddd; +} +.tabs-right > .nav-tabs > li > a { + margin-left: -1px; + -webkit-border-radius: 0 4px 4px 0; + -moz-border-radius: 0 4px 4px 0; + border-radius: 0 4px 4px 0; +} +.tabs-right > .nav-tabs > li > a:hover, +.tabs-right > .nav-tabs > li > a:focus { + border-color: #eeeeee #eeeeee #eeeeee #dddddd; +} +.tabs-right > .nav-tabs .active > a, +.tabs-right > .nav-tabs .active > a:hover, +.tabs-right > .nav-tabs .active > a:focus { + border-color: #ddd #ddd #ddd transparent; + *border-left-color: #ffffff; +} +.nav > .disabled > a { + color: #999999; +} +.nav > .disabled > a:hover, +.nav > .disabled > a:focus { + text-decoration: none; + background-color: transparent; + cursor: default; +} +.navbar { + overflow: visible; + margin-bottom: 20px; + *position: relative; + *z-index: 2; +} +.navbar-inner { + min-height: 40px; + padding-left: 20px; + padding-right: 20px; + background-color: #fafafa; + background-image: -moz-linear-gradient(top, #ffffff, #f2f2f2); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#ffffff), to(#f2f2f2)); + background-image: -webkit-linear-gradient(top, #ffffff, #f2f2f2); + background-image: -o-linear-gradient(top, #ffffff, #f2f2f2); + background-image: linear-gradient(to bottom, #ffffff, #f2f2f2); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ffffffff', endColorstr='#fff2f2f2', GradientType=0); + border: 1px solid #d4d4d4; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; + -webkit-box-shadow: 0 1px 4px rgba(0, 0, 0, 0.065); + -moz-box-shadow: 0 1px 4px rgba(0, 0, 0, 0.065); + box-shadow: 0 1px 4px rgba(0, 0, 0, 0.065); + *zoom: 1; +} +.navbar-inner:before, +.navbar-inner:after { + display: table; + content: ""; + line-height: 0; +} +.navbar-inner:after { + clear: both; +} +.navbar .container { + width: auto; +} +.nav-collapse.collapse { + height: auto; + overflow: visible; +} +.navbar .brand { + float: left; + display: block; + padding: 10px 20px 10px; + margin-left: -20px; + font-size: 20px; + font-weight: 200; + color: #777777; + text-shadow: 0 1px 0 #ffffff; +} +.navbar .brand:hover, +.navbar .brand:focus { + text-decoration: none; +} +.navbar-text { + margin-bottom: 0; + line-height: 40px; + color: #777777; +} +.navbar-link { + color: #777777; +} +.navbar-link:hover, +.navbar-link:focus { + color: #333333; +} +.navbar .divider-vertical { + height: 40px; + margin: 0 9px; + border-left: 1px solid #f2f2f2; + border-right: 1px solid #ffffff; +} +.navbar .btn, +.navbar .btn-group { + margin-top: 5px; +} +.navbar .btn-group .btn, +.navbar .input-prepend .btn, +.navbar .input-append .btn, +.navbar .input-prepend .btn-group, +.navbar .input-append .btn-group { + margin-top: 0; +} +.navbar-form { + margin-bottom: 0; + *zoom: 1; +} +.navbar-form:before, +.navbar-form:after { + display: table; + content: ""; + line-height: 0; +} +.navbar-form:after { + clear: both; +} +.navbar-form input, +.navbar-form select, +.navbar-form .radio, +.navbar-form .checkbox { + margin-top: 5px; +} +.navbar-form input, +.navbar-form select, +.navbar-form .btn { + display: inline-block; + margin-bottom: 0; +} +.navbar-form input[type="image"], +.navbar-form input[type="checkbox"], +.navbar-form input[type="radio"] { + margin-top: 3px; +} +.navbar-form .input-append, +.navbar-form .input-prepend { + margin-top: 5px; + white-space: nowrap; +} +.navbar-form .input-append input, +.navbar-form .input-prepend input { + margin-top: 0; +} +.navbar-search { + position: relative; + float: left; + margin-top: 5px; + margin-bottom: 0; +} +.navbar-search .search-query { + margin-bottom: 0; + padding: 4px 14px; + font-family: "Helvetica Neue", Helvetica, Arial, sans-serif; + font-size: 13px; + font-weight: normal; + line-height: 1; + -webkit-border-radius: 15px; + -moz-border-radius: 15px; + border-radius: 15px; +} +.navbar-static-top { + position: static; + margin-bottom: 0; +} +.navbar-static-top .navbar-inner { + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.navbar-fixed-top, +.navbar-fixed-bottom { + position: fixed; + right: 0; + left: 0; + z-index: 1030; + margin-bottom: 0; +} +.navbar-fixed-top .navbar-inner, +.navbar-static-top .navbar-inner { + border-width: 0 0 1px; +} +.navbar-fixed-bottom .navbar-inner { + border-width: 1px 0 0; +} +.navbar-fixed-top .navbar-inner, +.navbar-fixed-bottom .navbar-inner { + padding-left: 0; + padding-right: 0; + -webkit-border-radius: 0; + -moz-border-radius: 0; + border-radius: 0; +} +.navbar-static-top .container, +.navbar-fixed-top .container, +.navbar-fixed-bottom .container { + width: 940px; +} +.navbar-fixed-top { + top: 0; +} +.navbar-fixed-top .navbar-inner, +.navbar-static-top .navbar-inner { + -webkit-box-shadow: 0 1px 10px rgba(0,0,0,.1); + -moz-box-shadow: 0 1px 10px rgba(0,0,0,.1); + box-shadow: 0 1px 10px rgba(0,0,0,.1); +} +.navbar-fixed-bottom { + bottom: 0; +} +.navbar-fixed-bottom .navbar-inner { + -webkit-box-shadow: 0 -1px 10px rgba(0,0,0,.1); + -moz-box-shadow: 0 -1px 10px rgba(0,0,0,.1); + box-shadow: 0 -1px 10px rgba(0,0,0,.1); +} +.navbar .nav { + position: relative; + left: 0; + display: block; + float: left; + margin: 0 10px 0 0; +} +.navbar .nav.pull-right { + float: right; + margin-right: 0; +} +.navbar .nav > li { + float: left; +} +.navbar .nav > li > a { + float: none; + padding: 10px 15px 10px; + color: #777777; + text-decoration: none; + text-shadow: 0 1px 0 #ffffff; +} +.navbar .nav .dropdown-toggle .caret { + margin-top: 8px; +} +.navbar .nav > li > a:focus, +.navbar .nav > li > a:hover { + background-color: transparent; + color: #333333; + text-decoration: none; +} +.navbar .nav > .active > a, +.navbar .nav > .active > a:hover, +.navbar .nav > .active > a:focus { + color: #555555; + text-decoration: none; + background-color: #e5e5e5; + -webkit-box-shadow: inset 0 3px 8px rgba(0, 0, 0, 0.125); + -moz-box-shadow: inset 0 3px 8px rgba(0, 0, 0, 0.125); + box-shadow: inset 0 3px 8px rgba(0, 0, 0, 0.125); +} +.navbar .btn-navbar { + display: none; + float: right; + padding: 7px 10px; + margin-left: 5px; + margin-right: 5px; + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #ededed; + background-image: -moz-linear-gradient(top, #f2f2f2, #e5e5e5); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#f2f2f2), to(#e5e5e5)); + background-image: -webkit-linear-gradient(top, #f2f2f2, #e5e5e5); + background-image: -o-linear-gradient(top, #f2f2f2, #e5e5e5); + background-image: linear-gradient(to bottom, #f2f2f2, #e5e5e5); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#fff2f2f2', endColorstr='#ffe5e5e5', GradientType=0); + border-color: #e5e5e5 #e5e5e5 #bfbfbf; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #e5e5e5; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); + -webkit-box-shadow: inset 0 1px 0 rgba(255,255,255,.1), 0 1px 0 rgba(255,255,255,.075); + -moz-box-shadow: inset 0 1px 0 rgba(255,255,255,.1), 0 1px 0 rgba(255,255,255,.075); + box-shadow: inset 0 1px 0 rgba(255,255,255,.1), 0 1px 0 rgba(255,255,255,.075); +} +.navbar .btn-navbar:hover, +.navbar .btn-navbar:focus, +.navbar .btn-navbar:active, +.navbar .btn-navbar.active, +.navbar .btn-navbar.disabled, +.navbar .btn-navbar[disabled] { + color: #ffffff; + background-color: #e5e5e5; + *background-color: #d9d9d9; +} +.navbar .btn-navbar:active, +.navbar .btn-navbar.active { + background-color: #cccccc \9; +} +.navbar .btn-navbar .icon-bar { + display: block; + width: 18px; + height: 2px; + background-color: #f5f5f5; + -webkit-border-radius: 1px; + -moz-border-radius: 1px; + border-radius: 1px; + -webkit-box-shadow: 0 1px 0 rgba(0, 0, 0, 0.25); + -moz-box-shadow: 0 1px 0 rgba(0, 0, 0, 0.25); + box-shadow: 0 1px 0 rgba(0, 0, 0, 0.25); +} +.btn-navbar .icon-bar + .icon-bar { + margin-top: 3px; +} +.navbar .nav > li > .dropdown-menu:before { + content: ''; + display: inline-block; + border-left: 7px solid transparent; + border-right: 7px solid transparent; + border-bottom: 7px solid #ccc; + border-bottom-color: rgba(0, 0, 0, 0.2); + position: absolute; + top: -7px; + left: 9px; +} +.navbar .nav > li > .dropdown-menu:after { + content: ''; + display: inline-block; + border-left: 6px solid transparent; + border-right: 6px solid transparent; + border-bottom: 6px solid #ffffff; + position: absolute; + top: -6px; + left: 10px; +} +.navbar-fixed-bottom .nav > li > .dropdown-menu:before { + border-top: 7px solid #ccc; + border-top-color: rgba(0, 0, 0, 0.2); + border-bottom: 0; + bottom: -7px; + top: auto; +} +.navbar-fixed-bottom .nav > li > .dropdown-menu:after { + border-top: 6px solid #ffffff; + border-bottom: 0; + bottom: -6px; + top: auto; +} +.navbar .nav li.dropdown > a:hover .caret, +.navbar .nav li.dropdown > a:focus .caret { + border-top-color: #333333; + border-bottom-color: #333333; +} +.navbar .nav li.dropdown.open > .dropdown-toggle, +.navbar .nav li.dropdown.active > .dropdown-toggle, +.navbar .nav li.dropdown.open.active > .dropdown-toggle { + background-color: #e5e5e5; + color: #555555; +} +.navbar .nav li.dropdown > .dropdown-toggle .caret { + border-top-color: #777777; + border-bottom-color: #777777; +} +.navbar .nav li.dropdown.open > .dropdown-toggle .caret, +.navbar .nav li.dropdown.active > .dropdown-toggle .caret, +.navbar .nav li.dropdown.open.active > .dropdown-toggle .caret { + border-top-color: #555555; + border-bottom-color: #555555; +} +.navbar .pull-right > li > .dropdown-menu, +.navbar .nav > li > .dropdown-menu.pull-right { + left: auto; + right: 0; +} +.navbar .pull-right > li > .dropdown-menu:before, +.navbar .nav > li > .dropdown-menu.pull-right:before { + left: auto; + right: 12px; +} +.navbar .pull-right > li > .dropdown-menu:after, +.navbar .nav > li > .dropdown-menu.pull-right:after { + left: auto; + right: 13px; +} +.navbar .pull-right > li > .dropdown-menu .dropdown-menu, +.navbar .nav > li > .dropdown-menu.pull-right .dropdown-menu { + left: auto; + right: 100%; + margin-left: 0; + margin-right: -1px; + -webkit-border-radius: 6px 0 6px 6px; + -moz-border-radius: 6px 0 6px 6px; + border-radius: 6px 0 6px 6px; +} +.navbar-inverse .navbar-inner { + background-color: #1b1b1b; + background-image: -moz-linear-gradient(top, #222222, #111111); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#222222), to(#111111)); + background-image: -webkit-linear-gradient(top, #222222, #111111); + background-image: -o-linear-gradient(top, #222222, #111111); + background-image: linear-gradient(to bottom, #222222, #111111); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff222222', endColorstr='#ff111111', GradientType=0); + border-color: #252525; +} +.navbar-inverse .brand, +.navbar-inverse .nav > li > a { + color: #999999; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); +} +.navbar-inverse .brand:hover, +.navbar-inverse .nav > li > a:hover, +.navbar-inverse .brand:focus, +.navbar-inverse .nav > li > a:focus { + color: #ffffff; +} +.navbar-inverse .brand { + color: #999999; +} +.navbar-inverse .navbar-text { + color: #999999; +} +.navbar-inverse .nav > li > a:focus, +.navbar-inverse .nav > li > a:hover { + background-color: transparent; + color: #ffffff; +} +.navbar-inverse .nav .active > a, +.navbar-inverse .nav .active > a:hover, +.navbar-inverse .nav .active > a:focus { + color: #ffffff; + background-color: #111111; +} +.navbar-inverse .navbar-link { + color: #999999; +} +.navbar-inverse .navbar-link:hover, +.navbar-inverse .navbar-link:focus { + color: #ffffff; +} +.navbar-inverse .divider-vertical { + border-left-color: #111111; + border-right-color: #222222; +} +.navbar-inverse .nav li.dropdown.open > .dropdown-toggle, +.navbar-inverse .nav li.dropdown.active > .dropdown-toggle, +.navbar-inverse .nav li.dropdown.open.active > .dropdown-toggle { + background-color: #111111; + color: #ffffff; +} +.navbar-inverse .nav li.dropdown > a:hover .caret, +.navbar-inverse .nav li.dropdown > a:focus .caret { + border-top-color: #ffffff; + border-bottom-color: #ffffff; +} +.navbar-inverse .nav li.dropdown > .dropdown-toggle .caret { + border-top-color: #999999; + border-bottom-color: #999999; +} +.navbar-inverse .nav li.dropdown.open > .dropdown-toggle .caret, +.navbar-inverse .nav li.dropdown.active > .dropdown-toggle .caret, +.navbar-inverse .nav li.dropdown.open.active > .dropdown-toggle .caret { + border-top-color: #ffffff; + border-bottom-color: #ffffff; +} +.navbar-inverse .navbar-search .search-query { + color: #ffffff; + background-color: #515151; + border-color: #111111; + -webkit-box-shadow: inset 0 1px 2px rgba(0,0,0,.1), 0 1px 0 rgba(255,255,255,.15); + -moz-box-shadow: inset 0 1px 2px rgba(0,0,0,.1), 0 1px 0 rgba(255,255,255,.15); + box-shadow: inset 0 1px 2px rgba(0,0,0,.1), 0 1px 0 rgba(255,255,255,.15); + -webkit-transition: none; + -moz-transition: none; + -o-transition: none; + transition: none; +} +.navbar-inverse .navbar-search .search-query:-moz-placeholder { + color: #cccccc; +} +.navbar-inverse .navbar-search .search-query:-ms-input-placeholder { + color: #cccccc; +} +.navbar-inverse .navbar-search .search-query::-webkit-input-placeholder { + color: #cccccc; +} +.navbar-inverse .navbar-search .search-query:focus, +.navbar-inverse .navbar-search .search-query.focused { + padding: 5px 15px; + color: #333333; + text-shadow: 0 1px 0 #ffffff; + background-color: #ffffff; + border: 0; + -webkit-box-shadow: 0 0 3px rgba(0, 0, 0, 0.15); + -moz-box-shadow: 0 0 3px rgba(0, 0, 0, 0.15); + box-shadow: 0 0 3px rgba(0, 0, 0, 0.15); + outline: 0; +} +.navbar-inverse .btn-navbar { + color: #ffffff; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #0e0e0e; + background-image: -moz-linear-gradient(top, #151515, #040404); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#151515), to(#040404)); + background-image: -webkit-linear-gradient(top, #151515, #040404); + background-image: -o-linear-gradient(top, #151515, #040404); + background-image: linear-gradient(to bottom, #151515, #040404); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff151515', endColorstr='#ff040404', GradientType=0); + border-color: #040404 #040404 #000000; + border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); + *background-color: #040404; + /* Darken IE7 buttons by default so they stand out more given they won't have borders */ + + filter: progid:DXImageTransform.Microsoft.gradient(enabled = false); +} +.navbar-inverse .btn-navbar:hover, +.navbar-inverse .btn-navbar:focus, +.navbar-inverse .btn-navbar:active, +.navbar-inverse .btn-navbar.active, +.navbar-inverse .btn-navbar.disabled, +.navbar-inverse .btn-navbar[disabled] { + color: #ffffff; + background-color: #040404; + *background-color: #000000; +} +.navbar-inverse .btn-navbar:active, +.navbar-inverse .btn-navbar.active { + background-color: #000000 \9; +} +.breadcrumb { + padding: 8px 15px; + margin: 0 0 20px; + list-style: none; + background-color: #f5f5f5; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +.breadcrumb > li { + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; + text-shadow: 0 1px 0 #ffffff; +} +.breadcrumb > li > .divider { + padding: 0 5px; + color: #ccc; +} +.breadcrumb > .active { + color: #999999; +} +.pagination { + margin: 20px 0; +} +.pagination ul { + display: inline-block; + *display: inline; + /* IE7 inline-block hack */ + + *zoom: 1; + margin-left: 0; + margin-bottom: 0; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; + -webkit-box-shadow: 0 1px 2px rgba(0, 0, 0, 0.05); + -moz-box-shadow: 0 1px 2px rgba(0, 0, 0, 0.05); + box-shadow: 0 1px 2px rgba(0, 0, 0, 0.05); +} +.pagination ul > li { + display: inline; +} +.pagination ul > li > a, +.pagination ul > li > span { + float: left; + padding: 4px 12px; + line-height: 20px; + text-decoration: none; + background-color: #ffffff; + border: 1px solid #dddddd; + border-left-width: 0; +} +.pagination ul > li > a:hover, +.pagination ul > li > a:focus, +.pagination ul > .active > a, +.pagination ul > .active > span { + background-color: #f5f5f5; +} +.pagination ul > .active > a, +.pagination ul > .active > span { + color: #999999; + cursor: default; +} +.pagination ul > .disabled > span, +.pagination ul > .disabled > a, +.pagination ul > .disabled > a:hover, +.pagination ul > .disabled > a:focus { + color: #999999; + background-color: transparent; + cursor: default; +} +.pagination ul > li:first-child > a, +.pagination ul > li:first-child > span { + border-left-width: 1px; + -webkit-border-top-left-radius: 4px; + -moz-border-radius-topleft: 4px; + border-top-left-radius: 4px; + -webkit-border-bottom-left-radius: 4px; + -moz-border-radius-bottomleft: 4px; + border-bottom-left-radius: 4px; +} +.pagination ul > li:last-child > a, +.pagination ul > li:last-child > span { + -webkit-border-top-right-radius: 4px; + -moz-border-radius-topright: 4px; + border-top-right-radius: 4px; + -webkit-border-bottom-right-radius: 4px; + -moz-border-radius-bottomright: 4px; + border-bottom-right-radius: 4px; +} +.pagination-centered { + text-align: center; +} +.pagination-right { + text-align: right; +} +.pagination-large ul > li > a, +.pagination-large ul > li > span { + padding: 11px 19px; + font-size: 17.5px; +} +.pagination-large ul > li:first-child > a, +.pagination-large ul > li:first-child > span { + -webkit-border-top-left-radius: 6px; + -moz-border-radius-topleft: 6px; + border-top-left-radius: 6px; + -webkit-border-bottom-left-radius: 6px; + -moz-border-radius-bottomleft: 6px; + border-bottom-left-radius: 6px; +} +.pagination-large ul > li:last-child > a, +.pagination-large ul > li:last-child > span { + -webkit-border-top-right-radius: 6px; + -moz-border-radius-topright: 6px; + border-top-right-radius: 6px; + -webkit-border-bottom-right-radius: 6px; + -moz-border-radius-bottomright: 6px; + border-bottom-right-radius: 6px; +} +.pagination-mini ul > li:first-child > a, +.pagination-small ul > li:first-child > a, +.pagination-mini ul > li:first-child > span, +.pagination-small ul > li:first-child > span { + -webkit-border-top-left-radius: 3px; + -moz-border-radius-topleft: 3px; + border-top-left-radius: 3px; + -webkit-border-bottom-left-radius: 3px; + -moz-border-radius-bottomleft: 3px; + border-bottom-left-radius: 3px; +} +.pagination-mini ul > li:last-child > a, +.pagination-small ul > li:last-child > a, +.pagination-mini ul > li:last-child > span, +.pagination-small ul > li:last-child > span { + -webkit-border-top-right-radius: 3px; + -moz-border-radius-topright: 3px; + border-top-right-radius: 3px; + -webkit-border-bottom-right-radius: 3px; + -moz-border-radius-bottomright: 3px; + border-bottom-right-radius: 3px; +} +.pagination-small ul > li > a, +.pagination-small ul > li > span { + padding: 2px 10px; + font-size: 11.9px; +} +.pagination-mini ul > li > a, +.pagination-mini ul > li > span { + padding: 0 6px; + font-size: 10.5px; +} +.pager { + margin: 20px 0; + list-style: none; + text-align: center; + *zoom: 1; +} +.pager:before, +.pager:after { + display: table; + content: ""; + line-height: 0; +} +.pager:after { + clear: both; +} +.pager li { + display: inline; +} +.pager li > a, +.pager li > span { + display: inline-block; + padding: 5px 14px; + background-color: #fff; + border: 1px solid #ddd; + -webkit-border-radius: 15px; + -moz-border-radius: 15px; + border-radius: 15px; +} +.pager li > a:hover, +.pager li > a:focus { + text-decoration: none; + background-color: #f5f5f5; +} +.pager .next > a, +.pager .next > span { + float: right; +} +.pager .previous > a, +.pager .previous > span { + float: left; +} +.pager .disabled > a, +.pager .disabled > a:hover, +.pager .disabled > a:focus, +.pager .disabled > span { + color: #999999; + background-color: #fff; + cursor: default; +} +.modal-backdrop { + position: fixed; + top: 0; + right: 0; + bottom: 0; + left: 0; + z-index: 1040; + background-color: #000000; +} +.modal-backdrop.fade { + opacity: 0; +} +.modal-backdrop, +.modal-backdrop.fade.in { + opacity: 0.8; + filter: alpha(opacity=80); +} +.modal { + position: fixed; + top: 10%; + left: 50%; + z-index: 1050; + width: 560px; + margin-left: -280px; + background-color: #ffffff; + border: 1px solid #999; + border: 1px solid rgba(0, 0, 0, 0.3); + *border: 1px solid #999; + /* IE6-7 */ + + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; + -webkit-box-shadow: 0 3px 7px rgba(0, 0, 0, 0.3); + -moz-box-shadow: 0 3px 7px rgba(0, 0, 0, 0.3); + box-shadow: 0 3px 7px rgba(0, 0, 0, 0.3); + -webkit-background-clip: padding-box; + -moz-background-clip: padding-box; + background-clip: padding-box; + outline: none; +} +.modal.fade { + -webkit-transition: opacity .3s linear, top .3s ease-out; + -moz-transition: opacity .3s linear, top .3s ease-out; + -o-transition: opacity .3s linear, top .3s ease-out; + transition: opacity .3s linear, top .3s ease-out; + top: -25%; +} +.modal.fade.in { + top: 10%; +} +.modal-header { + padding: 9px 15px; + border-bottom: 1px solid #eee; +} +.modal-header .close { + margin-top: 2px; +} +.modal-header h3 { + margin: 0; + line-height: 30px; +} +.modal-body { + position: relative; + overflow-y: auto; + max-height: 400px; + padding: 15px; +} +.modal-form { + margin-bottom: 0; +} +.modal-footer { + padding: 14px 15px 15px; + margin-bottom: 0; + text-align: right; + background-color: #f5f5f5; + border-top: 1px solid #ddd; + -webkit-border-radius: 0 0 6px 6px; + -moz-border-radius: 0 0 6px 6px; + border-radius: 0 0 6px 6px; + -webkit-box-shadow: inset 0 1px 0 #ffffff; + -moz-box-shadow: inset 0 1px 0 #ffffff; + box-shadow: inset 0 1px 0 #ffffff; + *zoom: 1; +} +.modal-footer:before, +.modal-footer:after { + display: table; + content: ""; + line-height: 0; +} +.modal-footer:after { + clear: both; +} +.modal-footer .btn + .btn { + margin-left: 5px; + margin-bottom: 0; +} +.modal-footer .btn-group .btn + .btn { + margin-left: -1px; +} +.modal-footer .btn-block + .btn-block { + margin-left: 0; +} +.tooltip { + position: absolute; + z-index: 1030; + display: block; + visibility: visible; + font-size: 11px; + line-height: 1.4; + opacity: 0; + filter: alpha(opacity=0); +} +.tooltip.in { + opacity: 0.8; + filter: alpha(opacity=80); +} +.tooltip.top { + margin-top: -3px; + padding: 5px 0; +} +.tooltip.right { + margin-left: 3px; + padding: 0 5px; +} +.tooltip.bottom { + margin-top: 3px; + padding: 5px 0; +} +.tooltip.left { + margin-left: -3px; + padding: 0 5px; +} +.tooltip-inner { + max-width: 200px; + padding: 8px; + color: #ffffff; + text-align: center; + text-decoration: none; + background-color: #000000; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +.tooltip-arrow { + position: absolute; + width: 0; + height: 0; + border-color: transparent; + border-style: solid; +} +.tooltip.top .tooltip-arrow { + bottom: 0; + left: 50%; + margin-left: -5px; + border-width: 5px 5px 0; + border-top-color: #000000; +} +.tooltip.right .tooltip-arrow { + top: 50%; + left: 0; + margin-top: -5px; + border-width: 5px 5px 5px 0; + border-right-color: #000000; +} +.tooltip.left .tooltip-arrow { + top: 50%; + right: 0; + margin-top: -5px; + border-width: 5px 0 5px 5px; + border-left-color: #000000; +} +.tooltip.bottom .tooltip-arrow { + top: 0; + left: 50%; + margin-left: -5px; + border-width: 0 5px 5px; + border-bottom-color: #000000; +} +.popover { + position: absolute; + top: 0; + left: 0; + z-index: 1010; + display: none; + max-width: 276px; + padding: 1px; + text-align: left; + background-color: #ffffff; + -webkit-background-clip: padding-box; + -moz-background-clip: padding; + background-clip: padding-box; + border: 1px solid #ccc; + border: 1px solid rgba(0, 0, 0, 0.2); + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; + -webkit-box-shadow: 0 5px 10px rgba(0, 0, 0, 0.2); + -moz-box-shadow: 0 5px 10px rgba(0, 0, 0, 0.2); + box-shadow: 0 5px 10px rgba(0, 0, 0, 0.2); + white-space: normal; +} +.popover.top { + margin-top: -10px; +} +.popover.right { + margin-left: 10px; +} +.popover.bottom { + margin-top: 10px; +} +.popover.left { + margin-left: -10px; +} +.popover-title { + margin: 0; + padding: 8px 14px; + font-size: 14px; + font-weight: normal; + line-height: 18px; + background-color: #f7f7f7; + border-bottom: 1px solid #ebebeb; + -webkit-border-radius: 5px 5px 0 0; + -moz-border-radius: 5px 5px 0 0; + border-radius: 5px 5px 0 0; +} +.popover-title:empty { + display: none; +} +.popover-content { + padding: 9px 14px; +} +.popover .arrow, +.popover .arrow:after { + position: absolute; + display: block; + width: 0; + height: 0; + border-color: transparent; + border-style: solid; +} +.popover .arrow { + border-width: 11px; +} +.popover .arrow:after { + border-width: 10px; + content: ""; +} +.popover.top .arrow { + left: 50%; + margin-left: -11px; + border-bottom-width: 0; + border-top-color: #999; + border-top-color: rgba(0, 0, 0, 0.25); + bottom: -11px; +} +.popover.top .arrow:after { + bottom: 1px; + margin-left: -10px; + border-bottom-width: 0; + border-top-color: #ffffff; +} +.popover.right .arrow { + top: 50%; + left: -11px; + margin-top: -11px; + border-left-width: 0; + border-right-color: #999; + border-right-color: rgba(0, 0, 0, 0.25); +} +.popover.right .arrow:after { + left: 1px; + bottom: -10px; + border-left-width: 0; + border-right-color: #ffffff; +} +.popover.bottom .arrow { + left: 50%; + margin-left: -11px; + border-top-width: 0; + border-bottom-color: #999; + border-bottom-color: rgba(0, 0, 0, 0.25); + top: -11px; +} +.popover.bottom .arrow:after { + top: 1px; + margin-left: -10px; + border-top-width: 0; + border-bottom-color: #ffffff; +} +.popover.left .arrow { + top: 50%; + right: -11px; + margin-top: -11px; + border-right-width: 0; + border-left-color: #999; + border-left-color: rgba(0, 0, 0, 0.25); +} +.popover.left .arrow:after { + right: 1px; + border-right-width: 0; + border-left-color: #ffffff; + bottom: -10px; +} +.thumbnails { + margin-left: -20px; + list-style: none; + *zoom: 1; +} +.thumbnails:before, +.thumbnails:after { + display: table; + content: ""; + line-height: 0; +} +.thumbnails:after { + clear: both; +} +.row-fluid .thumbnails { + margin-left: 0; +} +.thumbnails > li { + float: left; + margin-bottom: 20px; + margin-left: 20px; +} +.thumbnail { + display: block; + padding: 4px; + line-height: 20px; + border: 1px solid #ddd; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; + -webkit-box-shadow: 0 1px 3px rgba(0, 0, 0, 0.055); + -moz-box-shadow: 0 1px 3px rgba(0, 0, 0, 0.055); + box-shadow: 0 1px 3px rgba(0, 0, 0, 0.055); + -webkit-transition: all 0.2s ease-in-out; + -moz-transition: all 0.2s ease-in-out; + -o-transition: all 0.2s ease-in-out; + transition: all 0.2s ease-in-out; +} +a.thumbnail:hover, +a.thumbnail:focus { + border-color: #0088cc; + -webkit-box-shadow: 0 1px 4px rgba(0, 105, 214, 0.25); + -moz-box-shadow: 0 1px 4px rgba(0, 105, 214, 0.25); + box-shadow: 0 1px 4px rgba(0, 105, 214, 0.25); +} +.thumbnail > img { + display: block; + max-width: 100%; + margin-left: auto; + margin-right: auto; +} +.thumbnail .caption { + padding: 9px; + color: #555555; +} +.media, +.media-body { + overflow: hidden; + *overflow: visible; + zoom: 1; +} +.media, +.media .media { + margin-top: 15px; +} +.media:first-child { + margin-top: 0; +} +.media-object { + display: block; +} +.media-heading { + margin: 0 0 5px; +} +.media > .pull-left { + margin-right: 10px; +} +.media > .pull-right { + margin-left: 10px; +} +.media-list { + margin-left: 0; + list-style: none; +} +.label, +.badge { + display: inline-block; + padding: 2px 4px; + font-size: 11.844px; + font-weight: bold; + line-height: 14px; + color: #ffffff; + vertical-align: baseline; + white-space: nowrap; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #999999; +} +.label { + -webkit-border-radius: 3px; + -moz-border-radius: 3px; + border-radius: 3px; +} +.badge { + padding-left: 9px; + padding-right: 9px; + -webkit-border-radius: 9px; + -moz-border-radius: 9px; + border-radius: 9px; +} +.label:empty, +.badge:empty { + display: none; +} +a.label:hover, +a.label:focus, +a.badge:hover, +a.badge:focus { + color: #ffffff; + text-decoration: none; + cursor: pointer; +} +.label-important, +.badge-important { + background-color: #b94a48; +} +.label-important[href], +.badge-important[href] { + background-color: #953b39; +} +.label-warning, +.badge-warning { + background-color: #f89406; +} +.label-warning[href], +.badge-warning[href] { + background-color: #c67605; +} +.label-success, +.badge-success { + background-color: #468847; +} +.label-success[href], +.badge-success[href] { + background-color: #356635; +} +.label-info, +.badge-info { + background-color: #3a87ad; +} +.label-info[href], +.badge-info[href] { + background-color: #2d6987; +} +.label-inverse, +.badge-inverse { + background-color: #333333; +} +.label-inverse[href], +.badge-inverse[href] { + background-color: #1a1a1a; +} +.btn .label, +.btn .badge { + position: relative; + top: -1px; +} +.btn-mini .label, +.btn-mini .badge { + top: 0; +} +@-webkit-keyframes progress-bar-stripes { + from { + background-position: 40px 0; + } + to { + background-position: 0 0; + } +} +@-moz-keyframes progress-bar-stripes { + from { + background-position: 40px 0; + } + to { + background-position: 0 0; + } +} +@-ms-keyframes progress-bar-stripes { + from { + background-position: 40px 0; + } + to { + background-position: 0 0; + } +} +@-o-keyframes progress-bar-stripes { + from { + background-position: 0 0; + } + to { + background-position: 40px 0; + } +} +@keyframes progress-bar-stripes { + from { + background-position: 40px 0; + } + to { + background-position: 0 0; + } +} +.progress { + overflow: hidden; + height: 20px; + margin-bottom: 20px; + background-color: #f7f7f7; + background-image: -moz-linear-gradient(top, #f5f5f5, #f9f9f9); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#f5f5f5), to(#f9f9f9)); + background-image: -webkit-linear-gradient(top, #f5f5f5, #f9f9f9); + background-image: -o-linear-gradient(top, #f5f5f5, #f9f9f9); + background-image: linear-gradient(to bottom, #f5f5f5, #f9f9f9); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#fff5f5f5', endColorstr='#fff9f9f9', GradientType=0); + -webkit-box-shadow: inset 0 1px 2px rgba(0, 0, 0, 0.1); + -moz-box-shadow: inset 0 1px 2px rgba(0, 0, 0, 0.1); + box-shadow: inset 0 1px 2px rgba(0, 0, 0, 0.1); + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +.progress .bar { + width: 0%; + height: 100%; + color: #ffffff; + float: left; + font-size: 12px; + text-align: center; + text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.25); + background-color: #0e90d2; + background-image: -moz-linear-gradient(top, #149bdf, #0480be); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#149bdf), to(#0480be)); + background-image: -webkit-linear-gradient(top, #149bdf, #0480be); + background-image: -o-linear-gradient(top, #149bdf, #0480be); + background-image: linear-gradient(to bottom, #149bdf, #0480be); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff149bdf', endColorstr='#ff0480be', GradientType=0); + -webkit-box-shadow: inset 0 -1px 0 rgba(0, 0, 0, 0.15); + -moz-box-shadow: inset 0 -1px 0 rgba(0, 0, 0, 0.15); + box-shadow: inset 0 -1px 0 rgba(0, 0, 0, 0.15); + -webkit-box-sizing: border-box; + -moz-box-sizing: border-box; + box-sizing: border-box; + -webkit-transition: width 0.6s ease; + -moz-transition: width 0.6s ease; + -o-transition: width 0.6s ease; + transition: width 0.6s ease; +} +.progress .bar + .bar { + -webkit-box-shadow: inset 1px 0 0 rgba(0,0,0,.15), inset 0 -1px 0 rgba(0,0,0,.15); + -moz-box-shadow: inset 1px 0 0 rgba(0,0,0,.15), inset 0 -1px 0 rgba(0,0,0,.15); + box-shadow: inset 1px 0 0 rgba(0,0,0,.15), inset 0 -1px 0 rgba(0,0,0,.15); +} +.progress-striped .bar { + background-color: #149bdf; + background-image: -webkit-gradient(linear, 0 100%, 100% 0, color-stop(0.25, rgba(255, 255, 255, 0.15)), color-stop(0.25, transparent), color-stop(0.5, transparent), color-stop(0.5, rgba(255, 255, 255, 0.15)), color-stop(0.75, rgba(255, 255, 255, 0.15)), color-stop(0.75, transparent), to(transparent)); + background-image: -webkit-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -moz-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -o-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + -webkit-background-size: 40px 40px; + -moz-background-size: 40px 40px; + -o-background-size: 40px 40px; + background-size: 40px 40px; +} +.progress.active .bar { + -webkit-animation: progress-bar-stripes 2s linear infinite; + -moz-animation: progress-bar-stripes 2s linear infinite; + -ms-animation: progress-bar-stripes 2s linear infinite; + -o-animation: progress-bar-stripes 2s linear infinite; + animation: progress-bar-stripes 2s linear infinite; +} +.progress-danger .bar, +.progress .bar-danger { + background-color: #dd514c; + background-image: -moz-linear-gradient(top, #ee5f5b, #c43c35); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#ee5f5b), to(#c43c35)); + background-image: -webkit-linear-gradient(top, #ee5f5b, #c43c35); + background-image: -o-linear-gradient(top, #ee5f5b, #c43c35); + background-image: linear-gradient(to bottom, #ee5f5b, #c43c35); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ffee5f5b', endColorstr='#ffc43c35', GradientType=0); +} +.progress-danger.progress-striped .bar, +.progress-striped .bar-danger { + background-color: #ee5f5b; + background-image: -webkit-gradient(linear, 0 100%, 100% 0, color-stop(0.25, rgba(255, 255, 255, 0.15)), color-stop(0.25, transparent), color-stop(0.5, transparent), color-stop(0.5, rgba(255, 255, 255, 0.15)), color-stop(0.75, rgba(255, 255, 255, 0.15)), color-stop(0.75, transparent), to(transparent)); + background-image: -webkit-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -moz-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -o-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); +} +.progress-success .bar, +.progress .bar-success { + background-color: #5eb95e; + background-image: -moz-linear-gradient(top, #62c462, #57a957); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#62c462), to(#57a957)); + background-image: -webkit-linear-gradient(top, #62c462, #57a957); + background-image: -o-linear-gradient(top, #62c462, #57a957); + background-image: linear-gradient(to bottom, #62c462, #57a957); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff62c462', endColorstr='#ff57a957', GradientType=0); +} +.progress-success.progress-striped .bar, +.progress-striped .bar-success { + background-color: #62c462; + background-image: -webkit-gradient(linear, 0 100%, 100% 0, color-stop(0.25, rgba(255, 255, 255, 0.15)), color-stop(0.25, transparent), color-stop(0.5, transparent), color-stop(0.5, rgba(255, 255, 255, 0.15)), color-stop(0.75, rgba(255, 255, 255, 0.15)), color-stop(0.75, transparent), to(transparent)); + background-image: -webkit-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -moz-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -o-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); +} +.progress-info .bar, +.progress .bar-info { + background-color: #4bb1cf; + background-image: -moz-linear-gradient(top, #5bc0de, #339bb9); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#5bc0de), to(#339bb9)); + background-image: -webkit-linear-gradient(top, #5bc0de, #339bb9); + background-image: -o-linear-gradient(top, #5bc0de, #339bb9); + background-image: linear-gradient(to bottom, #5bc0de, #339bb9); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#ff5bc0de', endColorstr='#ff339bb9', GradientType=0); +} +.progress-info.progress-striped .bar, +.progress-striped .bar-info { + background-color: #5bc0de; + background-image: -webkit-gradient(linear, 0 100%, 100% 0, color-stop(0.25, rgba(255, 255, 255, 0.15)), color-stop(0.25, transparent), color-stop(0.5, transparent), color-stop(0.5, rgba(255, 255, 255, 0.15)), color-stop(0.75, rgba(255, 255, 255, 0.15)), color-stop(0.75, transparent), to(transparent)); + background-image: -webkit-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -moz-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -o-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); +} +.progress-warning .bar, +.progress .bar-warning { + background-color: #faa732; + background-image: -moz-linear-gradient(top, #fbb450, #f89406); + background-image: -webkit-gradient(linear, 0 0, 0 100%, from(#fbb450), to(#f89406)); + background-image: -webkit-linear-gradient(top, #fbb450, #f89406); + background-image: -o-linear-gradient(top, #fbb450, #f89406); + background-image: linear-gradient(to bottom, #fbb450, #f89406); + background-repeat: repeat-x; + filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#fffbb450', endColorstr='#fff89406', GradientType=0); +} +.progress-warning.progress-striped .bar, +.progress-striped .bar-warning { + background-color: #fbb450; + background-image: -webkit-gradient(linear, 0 100%, 100% 0, color-stop(0.25, rgba(255, 255, 255, 0.15)), color-stop(0.25, transparent), color-stop(0.5, transparent), color-stop(0.5, rgba(255, 255, 255, 0.15)), color-stop(0.75, rgba(255, 255, 255, 0.15)), color-stop(0.75, transparent), to(transparent)); + background-image: -webkit-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -moz-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: -o-linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); + background-image: linear-gradient(45deg, rgba(255, 255, 255, 0.15) 25%, transparent 25%, transparent 50%, rgba(255, 255, 255, 0.15) 50%, rgba(255, 255, 255, 0.15) 75%, transparent 75%, transparent); +} +.accordion { + margin-bottom: 20px; +} +.accordion-group { + margin-bottom: 2px; + border: 1px solid #e5e5e5; + -webkit-border-radius: 4px; + -moz-border-radius: 4px; + border-radius: 4px; +} +.accordion-heading { + border-bottom: 0; +} +.accordion-heading .accordion-toggle { + display: block; + padding: 8px 15px; +} +.accordion-toggle { + cursor: pointer; +} +.accordion-inner { + padding: 9px 15px; + border-top: 1px solid #e5e5e5; +} +.carousel { + position: relative; + margin-bottom: 20px; + line-height: 1; +} +.carousel-inner { + overflow: hidden; + width: 100%; + position: relative; +} +.carousel-inner > .item { + display: none; + position: relative; + -webkit-transition: 0.6s ease-in-out left; + -moz-transition: 0.6s ease-in-out left; + -o-transition: 0.6s ease-in-out left; + transition: 0.6s ease-in-out left; +} +.carousel-inner > .item > img, +.carousel-inner > .item > a > img { + display: block; + line-height: 1; +} +.carousel-inner > .active, +.carousel-inner > .next, +.carousel-inner > .prev { + display: block; +} +.carousel-inner > .active { + left: 0; +} +.carousel-inner > .next, +.carousel-inner > .prev { + position: absolute; + top: 0; + width: 100%; +} +.carousel-inner > .next { + left: 100%; +} +.carousel-inner > .prev { + left: -100%; +} +.carousel-inner > .next.left, +.carousel-inner > .prev.right { + left: 0; +} +.carousel-inner > .active.left { + left: -100%; +} +.carousel-inner > .active.right { + left: 100%; +} +.carousel-control { + position: absolute; + top: 40%; + left: 15px; + width: 40px; + height: 40px; + margin-top: -20px; + font-size: 60px; + font-weight: 100; + line-height: 30px; + color: #ffffff; + text-align: center; + background: #222222; + border: 3px solid #ffffff; + -webkit-border-radius: 23px; + -moz-border-radius: 23px; + border-radius: 23px; + opacity: 0.5; + filter: alpha(opacity=50); +} +.carousel-control.right { + left: auto; + right: 15px; +} +.carousel-control:hover, +.carousel-control:focus { + color: #ffffff; + text-decoration: none; + opacity: 0.9; + filter: alpha(opacity=90); +} +.carousel-indicators { + position: absolute; + top: 15px; + right: 15px; + z-index: 5; + margin: 0; + list-style: none; +} +.carousel-indicators li { + display: block; + float: left; + width: 10px; + height: 10px; + margin-left: 5px; + text-indent: -999px; + background-color: #ccc; + background-color: rgba(255, 255, 255, 0.25); + border-radius: 5px; +} +.carousel-indicators .active { + background-color: #fff; +} +.carousel-caption { + position: absolute; + left: 0; + right: 0; + bottom: 0; + padding: 15px; + background: #333333; + background: rgba(0, 0, 0, 0.75); +} +.carousel-caption h4, +.carousel-caption p { + color: #ffffff; + line-height: 20px; +} +.carousel-caption h4 { + margin: 0 0 5px; +} +.carousel-caption p { + margin-bottom: 0; +} +.hero-unit { + padding: 60px; + margin-bottom: 30px; + font-size: 18px; + font-weight: 200; + line-height: 30px; + color: inherit; + background-color: #eeeeee; + -webkit-border-radius: 6px; + -moz-border-radius: 6px; + border-radius: 6px; +} +.hero-unit h1 { + margin-bottom: 0; + font-size: 60px; + line-height: 1; + color: inherit; + letter-spacing: -1px; +} +.hero-unit li { + line-height: 30px; +} +.pull-right { + float: right; +} +.pull-left { + float: left; +} +.hide { + display: none; +} +.show { + display: block; +} +.invisible { + visibility: hidden; +} +.affix { + position: fixed; +} +.pull-right { + float: right; +} +.pull-left { + float: left; +} +.hide { + display: none; +} +.show { + display: block; +} +.invisible { + visibility: hidden; +} +.affix { + position: fixed; +} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/css/calendar.css b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/calendar.css new file mode 100644 index 000000000..660fe034f --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/calendar.css @@ -0,0 +1,7 @@ +.calendar{z-index:99;position:relative;display:none;background:#fff;border:2px solid #000;font-size:11px;color:#000;cursor:default;font-family:Arial,Helvetica,sans-serif; +border-radius: 10px; + -moz-border-radius: 10px; + -webkit-border-radius: 10px; +}.calendar table{margin:0px;font-size:11px;color:#000;cursor:default;font-family:tahoma,verdana,sans-serif;}.calendar .button{text-align:center;padding:1px;color:#fff;background:#000;}.calendar .nav{background:#000;color:#fff}.calendar thead .title{font-weight:bold;padding:1px;background:#000;color:#fff;text-align:center;}.calendar thead .name{padding:2px;text-align:center;background:#bbb;}.calendar thead .weekend{color:#f00;}.calendar thead .hilite {background-color:#666;}.calendar thead .active{padding:2px 0 0 2px;background-color:#c4c0b8;}.calendar tbody .day{width:2em;text-align:right;padding:2px 4px 2px 2px;}.calendar tbody .day.othermonth{color:#aaa;}.calendar tbody .day.othermonth.oweekend{color:#faa;}.calendar table .wn{padding:2px 3px 2px 2px;background:#bbb;}.calendar tbody .rowhilite td{background:#ddd;}.calendar tbody td.hilite{background:#bbb;}.calendar tbody td.active{background:#bbb;}.calendar tbody td.selected{font-weight:bold;background:#ddd;}.calendar tbody td.weekend{color:#f00;}.calendar tbody td.today{font-weight:bold;color:#00f;}.calendar tbody .disabled{color:#999;}.calendar tbody .emptycell{visibility:hidden;}.calendar tbody .emptyrow{display:none;}.calendar tfoot .ttip{background:#bbb;padding:1px;background:#000;color:#fff;text-align:center;}.calendar tfoot .hilite{background:#ddd;}.calendar tfoot .active{}.calendar .combo{position:absolute;display:none;width:4em;top:0;left:0;cursor:default;background:#e4e0d8;padding:1px;z-index:100;}.calendar .combo .label,.calendar .combo .label-IEfix{text-align:center;padding:1px;}.calendar .combo .label-IEfix{width:4em;}.calendar .combo .active{background:#c4c0b8;}.calendar .combo .hilite{background:#048;color:#fea;}.calendar td.time{padding:1px 0;text-align:center;background-color:#bbb;}.calendar td.time .hour,.calendar td.time .minute,.calendar td.time .ampm{padding:0 3px 0 4px;font-weight:bold;}.calendar td.time .ampm{text-align:center;}.calendar td.time .colon{padding:0 2px 0 3px;font-weight:bold;}.calendar td.time span.hilite{}.calendar td.time span.active{border-color:#f00;background-color:#000;color:#0f0;}.hour,.minute{font-size:2em;} + +#CP_hourcont{z-index:99;padding:0;position:absolute;border:1px dashed #666;background-color:#eee;display:none;}#CP_minutecont{z-index:99;background-color:#ddd;padding:1px;position:absolute;width:45px;display:none;}.floatleft{float:left;}.CP_hour{z-index:99;padding:1px;font-family:Arial,Helvetica,sans-serif;font-size:9px;white-space:nowrap;cursor:pointer;width:35px;}.CP_minute{z-index:99;padding:1px;font-family:Arial,Helvetica,sans-serif;font-size:9px;white-space:nowrap;cursor:pointer;width:auto;}.CP_over{background-color:#fff;z-index:99} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/css/jquery.splitter.css b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/jquery.splitter.css new file mode 100644 index 000000000..dc336482a --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/jquery.splitter.css @@ -0,0 +1,47 @@ +/*! + * StyleSheet for JQuery Spliter Plugin + * Copyright (C) 2010 Jakub Jankiewicz + * + * Same license as plugin + */ +.spliter_panel { + position: relative; +} +.spliter_panel .vspliter { + background-color: grey; + cursor: col-resize; + z-index:900; + width: 4px; + position: absolute !important; +} + +.spliter_panel .hspliter { + background-color: #5F5F5F; + cursor: row-resize; + z-index: 800; + height: 4px; + position: absolute !important; +} +.spliter_panel .vspliter, .spliter_panel .left_panel, .spliter_panel .right_panel, +.spliter_panel .hspliter, .spliter_panel .top_panel, .spliter_panel .bottom_panel { + position: relative; + overflow: auto; +} +.spliter_panel .vspliter, .spliter_panel .left_panel, .spliter_panel .right_panel { + height: 100%; +} +.spliter_panel .hspliter, .spliter_panel .top_panel, .spliter_panel .bottom_panel { + width: 100%; +} +.spliter_panel .top_panel, .spliter_panel .left_panel, .spliter_panel .vspliter { + top: 0; +} +.spliter_panel .top_panel, .spliter_panel .bottom_panel, .spliter_panel .left_panel, .spliter_panel .hspliter { + left: 0; +} +.spliter_panel .bottom_panel { + bottom: 0; +} +.spliter_panel .right_panel { + right: 0; +} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py.css b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py.css new file mode 100644 index 000000000..7bcc151dd --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py.css @@ -0,0 +1,314 @@ +/** these MUST stay **/ +a {text-decoration:none; white-space:nowrap} +a:hover {text-decoration:underline} +a.button {text-decoration:none} +h1,h2,h3,h4,h5,h6 {margin:0.5em 0 0.25em 0; display:block; + font-family:Helvetica} +h1 {font-size:4.00em} +h2 {font-size:3.00em} +h3 {font-size:2.00em} +h4 {font-size:1.50em} +h5 {font-size:1.25em} +h6 {font-size:1.12em} +th,label {font-weight:bold; white-space:nowrap;} +td,th {text-align:left; padding:2px 5px 2px 5px} +th {vertical-align:middle; border-right:1px solid white} +td {vertical-align:top} +form table tr td label {text-align:left} +p,table,ol,ul {padding:0; margin: 0.75em 0} +p {text-align:justify} +ol, ul {list-style-position:outside; margin-left:2em} +li {margin-bottom:0.5em} +span,input,select,textarea,button,label,a {display:inline} +img {border:0} +blockquote,blockquote p,p blockquote { + font-style:italic; margin:0.5em 30px 0.5em 30px; font-size:0.9em} +i,em {font-style:italic} +strong {font-weight:bold} +small {font-size:0.8em} +code {font-family:Courier} +textarea {width:100%} +video {width:400px} +audio {width:200px} +input[type=text],input[type=password],select{width:300px; margin-right:5px} +.hidden {display:none;visibility:visible} +.right {float:right; text-align:right} +.left {float:left; text-align:left} +.center {width:100; text-align:center; vertical-align:middle} +/** end **/ + +/* Sticky footer begin */ + +.main { + padding:20px 0 50px 0; +} + +.footer,.push { + height:6em; + padding:1em 0; + clear:both; +} + +.footer-content {position:relative; bottom:-4em; width:100%} + +.auth_navbar { + white-space:nowrap; +} + +/* Sticky footer end */ + +.footer { + border-top:1px #DEDEDE solid; +} +.header { + /* background:; */ +} + + +fieldset {padding:16px; border-top:1px #DEDEDE solid} +fieldset legend {text-transform:uppercase; font-weight:bold; padding:4px 16px 4px 16px; background:#f1f1f1} + +/* fix ie problem with menu */ + +td.w2p_fw {padding-bottom:1px} +td.w2p_fl,td.w2p_fw,td.w2p_fc {vertical-align:top} +td.w2p_fl {text-align:left} +td.w2p_fl, td.w2p_fw {padding-right:7px} +td.w2p_fl,td.w2p_fc {padding-top:4px} +div.w2p_export_menu {margin:5px 0} +div.w2p_export_menu a, div.w2p_wiki_tags a, div.w2p_cloud a {margin-left:5px; padding:2px 5px; background-color:#f1f1f1; border-radius:5px; -moz-border-radius:5px; -webkit-border-radius:5px;} + +/* tr#submit_record__row {border-top:1px solid #E5E5E5} */ +#submit_record__row td {padding-top:.5em} + +/* Fix */ +#auth_user_remember__row label {display:inline} +#web2py_user_form td {vertical-align:top} + +/*********** web2py specific ***********/ +div.flash { + font-weight:bold; + display:none; + position:fixed; + padding:10px; + top:48px; + right:50px; + min-width:280px; + opacity:0.95; + margin:0px 0px 10px 10px; + vertical-align:middle; + cursor:pointer; + color:#fff; + background-color:#000; + border:2px solid #fff; + border-radius:8px; + -o-border-radius: 8px; + -moz-border-radius:8px; + -webkit-border-radius:8px; + background-image: -webkit-linear-gradient(top,#222,#000); + background-image: -o-linear-gradient(top,#222,#000); + background-image: -moz-linear-gradient(90deg, #222, #000); + background-image: linear-gradient(top,#222,#000); + background-repeat: repeat-x; + font-family: "Helvetica Neue", Helvetica, Arial, sans-serif; + -webkit-font-smoothing: antialiased; + z-index:2000; +} + +div.flash #closeflash{color:inherit; float:right; margin-left:15px;} +.ie-lte7 div.flash #closeflash +{color:expression(this.parentNode.currentStyle['color']);float:none;position:absolute;right:4px;} + +div.flash:hover { opacity:0.25; } + +div.error_wrapper {display:block} +div.error { + width: 298px; + background:red; + border: 2px solid #d00; + color:white; + padding:5px; + display:inline-block; + background-image: -webkit-linear-gradient(left,#f00,#fdd); + background-image: -o-linear-gradient(left,#f00,#fdd); + background-image: -moz-linear-gradient(0deg, #f00, #fdd); + background-image: linear-gradient(left,#f00,#fdd); + background-repeat: repeat-y; +} + +.topbar { + padding:10px 0; + width:100%; + color:#959595; + vertical-align:middle; + padding:auto; + background-image:-khtml-gradient(linear,left top,left bottom,from(#333333),to(#222222)); + background-image:-moz-linear-gradient(top,#333333,#222222); + background-image:-ms-linear-gradient(top,#333333,#222222); + background-image:-webkit-gradient(linear,left top,left bottom,color-stop(0%,#333333),color-stop(100%,#222222)); + background-image:-webkit-linear-gradient(top,#333333,#222222); + background-image:-o-linear-gradient(top,#333333,#222222); + background-image:linear-gradient(top,#333333,#222222); + filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#333333',endColorstr='#222222',GradientType=0); + -webkit-box-shadow:0 1px 3px rgba(0,0,0,0.25),inset 0 -1px 0 rgba(0,0,0,0.1); + -moz-box-shadow:0 1px 3px rgba(0,0,0,0.25),inset 0 -1px 0 rgba(0,0,0,0.1); + box-shadow:0 1px 3px rgba(0,0,0,0.25),inset 0 -1px 0 rgba(0,0,0,0.1); +} + +.topbar a { + color:#e1e1e1; +} + +#navbar {float:right; padding:5px; /* same as superfish */} + +.statusbar { + background-color:#F5F5F5; + margin-top:1em; + margin-bottom:1em; + padding:.5em 1em; + border:1px solid #ddd; + border-radius:5px; + -moz-border-radius:5px; + -webkit-border-radius:5px; +} + +.breadcrumbs {float:left} + +.copyright {float:left} +#poweredBy {float:right} + +/* #MEDIA QUERIES SECTION */ + +/* +*Grid +* +* The default style for SQLFORM.grid even using jquery-iu or another ui framework +* will look better with the declarations below +* if needed to remove base.css consider keeping these following lines in some css file. +*/ +/* .web2py_table {border:1px solid #ccc} */ +.web2py_paginator {} +.web2py_grid {width:100%} +.web2py_grid table {width:100%} +.web2py_grid tbody td {padding:2px 5px 2px 5px; vertical-align: middle;} + +.web2py_grid thead th,.web2py_grid tfoot td { + background-color:#EAEAEA; + padding:10px 5px 10px 5px; +} + +.web2py_grid tr.odd {background-color:#F9F9F9} +.web2py_grid tr:hover {background-color:#F5F5F5} + +/* +.web2py_breadcrumbs a { + line-height:20px; margin-right:5px; display:inline-block; + padding:3px 5px 3px 5px; + font-family:'lucida grande',tahoma,verdana,arial,sans-serif; + color:#3C3C3D; + text-shadow:1px 1px 0 #FFFFFF; + white-space:nowrap; overflow:visible; cursor:pointer; + background:#ECECEC; + border:1px solid #CACACA; + -webkit-border-radius:2px; -moz-border-radius:2px; + -webkit-background-clip:padding-box; border-radius:2px; + outline:none; position:relative; zoom:1; *display:inline; +} +*/ + +.web2py_console form { + width: 100%; + display: inline; + vertical-align: middle; + margin: 0 0 0 5px; +} + +.web2py_console form select { + margin:0; +} + +.web2py_search_actions { + float:left; + text-align:left; +} + +.web2py_grid .row_buttons { + min-height:25px; + vertical-align:middle; +} +.web2py_grid .row_buttons a { + margin:3px; +} + +.web2py_search_actions { + width:100%; +} + +.web2py_grid .row_buttons a, +.web2py_paginator ul li a, +.web2py_search_actions a, +.web2py_console input[type=submit], +.web2py_console input[type=button], +.web2py_console button { + line-height:20px; + margin-right:2px; display:inline-block; + padding:3px 5px 3px 5px; +} + +.web2py_counter { + margin-top:5px; + margin-right:2px; + width:35%; + float:right; + text-align:right; +} + +/*Fix firefox problem*/ +.web2py_table {clear:both; display:block} + +.web2py_paginator { + padding:5px; + text-align:right; + background-color:#f2f2f2; + +} +.web2py_paginator ul { + list-style-type:none; + margin:0px; + padding:0px; +} + +.web2py_paginator ul li { + display:inline; +} + +.web2py_paginator .current { + font-weight:bold; +} + +.web2py_breadcrumbs ul { + list-style:none; + margin-bottom:18px; +} + +li.w2p_grid_breadcrumb_elem { + display:inline-block; +} + +.web2py_console form { vertical-align: middle; } +.web2py_console input, .web2py_console select, +.web2py_console a { margin: 2px; } + + +#wiki_page_body { + width: 600px; + height: auto; + min-height: 400px; +} + +/* fix some IE problems */ + +.ie-lte7 .topbar .container {z-index:2} +.ie-lte8 div.flash{ filter: progid:DXImageTransform.Microsoft.gradient(startColorstr='#222222', endColorstr='#000000', GradientType=0 ); } +.ie-lte8 div.flash:hover {filter:alpha(opacity=25);} +.ie9 #w2p_query_panel {padding-bottom:2px} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap.css b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap.css new file mode 100644 index 000000000..ee752b4b6 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap.css @@ -0,0 +1,231 @@ +/*============================================================= + CUSTOM RULES +==============================================================*/ + +body{height:auto;} /* to avoid vertical scroll bar */ +div.flash.flash-center{left:25%;right:25%;} +div.flash.flash-top,div.flash.flash-top:hover{ + position:relative; + display:block; + margin:0; + padding:1em; + top:0; + left:0; + width:100%; + text-align:center; + text-shadow:0 1px 0 rgba(255, 255, 255, 0.5); + color:#865100; + background:#feea9a; + border:1px solid; + border-top:0px; + border-left:0px; + border-right:0px; + border-radius:0; + opacity:1; +} +#header{margin-top:60px;} +.mastheader h1 { + margin-bottom:9px; + font-size:81px; + font-weight:bold; + letter-spacing:-1px; + line-height:1; + font-size:54px; +} +.mastheader small { + font-size:20px; + font-weight:300; +} +/* auth navbar - primitive style */ +.auth_navbar,.auth_navbar a{color:inherit;} +.ie-lte7 .auth_navbar,.auth_navbar a{color:expression(this.parentNode.currentStyle['color']); /* ie7 doesn't support inherit */} +.auth_navbar a{white-space:nowrap;} /* to avoid the nav split on more lines */ +.auth_navbar a:hover{color:white;text-decoration:none;} +ul#navbar>.auth_navbar{ + display:inline-block; + padding:5px; +} +/* form errors message box customization */ +div.error_wrapper{margin-bottom:9px;} +div.error_wrapper .error{ + border-radius: 4px; + -o-border-radius: 4px; + -moz-border-radius: 4px; + -webkit-border-radius: 4px; +} +/* below rules are only for formstyle = bootstrap +trying to make errors look like bootstrap ones */ +div.controls .error_wrapper{ + display:inline-block; + margin-bottom:0; + vertical-align:middle; +} +div.controls .error{ + min-width:5px; + background:inherit; + color:#B94A48; + border:none; + padding:0; + margin:0; + /*display:inline;*/ /* uncommenting this, the animation effect is lost */ +} +div.controls .help-inline{color:#3A87AD;} +div.controls .error_wrapper +.help-inline {margin-left:-99999px;} +div.controls select +.error_wrapper {margin-left:5px;} +.ie-lte7 div.error{color:#fff;} + +/* beautify brand */ +.navbar-inverse .brand{color:#c6cecc;} +.navbar-inverse .brand b{display:inline-block;margin-top:-1px;} +.navbar-inverse .brand b>span{font-size:22px;color:white} +.navbar-inverse .brand:hover b>span{color:white} +/* beautify web2py link in navbar */ +span.highlighted{color:#d8d800;} +.open span.highlighted{color:#ffff00;} + +/*============================================================= + OVERRIDING WEB2PY.CSS RULES +==============================================================*/ + +/* reset to default */ +a{white-space:normal;} +li{margin-bottom:0;} +textarea,button{display:block;} +/*reset ul padding */ +ul#navbar{padding:0;} +/* label aligned to related input */ +td.w2p_fl,td.w2p_fc {padding:0;} +#web2py_user_form td{vertical-align:middle;} + +/*============================================================= + OVERRIDING BOOTSTRAP.CSS RULES +==============================================================*/ + +/* because web2py handles this via js */ +.hidden{visibility:visible;} +/* right folder for bootstrap black images/icons */ +[class^="icon-"],[class*=" icon-"]{ + background-image:url("../images/glyphicons-halflings.png") +} +/* right folder for bootstrap white images/icons */ +.icon-white, +.nav-tabs > .active > a > [class^="icon-"], +.nav-tabs > .active > a > [class*=" icon-"], +.nav-pills > .active > a > [class^="icon-"], +.nav-pills > .active > a > [class*=" icon-"], +.nav-list > .active > a > [class^="icon-"], +.nav-list > .active > a > [class*=" icon-"], +.navbar-inverse .nav > .active > a > [class^="icon-"], +.navbar-inverse .nav > .active > a > [class*=" icon-"], +.dropdown-menu > li > a:hover > [class^="icon-"], +.dropdown-menu > li > a:hover > [class*=" icon-"], +.dropdown-menu > .active > a > [class^="icon-"], +.dropdown-menu > .active > a > [class*=" icon-"] { + background-image:url("../images/glyphicons-halflings-white.png"); +} +/* bootstrap has a label as input's wrapper while web2py has a div */ +div>input[type="radio"],div>input[type="checkbox"]{margin:0;} +/* bootstrap has button instead of input */ +input[type="button"], input[type="submit"]{margin-right:8px;} + +/*============================================================= +RULES FOR SOLVING CONFLICTS BETWEEN WEB2PY.CSS AND BOOTSTRAP.CSS +==============================================================*/ + +/*when formstyle=table3cols*/ +tr#auth_user_remember__row>td.w2p_fw>div{padding-bottom:8px;} +td.w2p_fw div>label{vertical-align:middle;} +td.w2p_fc {padding-bottom:5px;} +/*when formstyle=divs*/ +div#auth_user_remember__row{margin-top:4px;} +div#auth_user_remember__row>.w2p_fl{display:none;} +div#auth_user_remember__row>.w2p_fw{min-height:39px;} +div.w2p_fw,div.w2p_fc{ + display:inline-block; + vertical-align:middle; + margin-bottom:0; +} +div.w2p_fc{ + padding-left:5px; + margin-top:-8px; +} +/*when formstyle=ul*/ +form>ul{ + list-style:none; + margin:0; +} +li#auth_user_remember__row{margin-top:4px;} +li#auth_user_remember__row>.w2p_fl{display:none;} +li#auth_user_remember__row>.w2p_fw{min-height:39px;} +/*when formstyle=bootstrap*/ +#auth_user_remember__row label.checkbox{display:block;} +span.inline-help{display:inline-block;} +input[type="text"].input-xlarge,input[type="password"].input-xlarge{width:270px;} +/*when recaptcha is used*/ +#recaptcha{min-height:30px;display:inline-block;margin-bottom:0;line-height:30px;vertical-align:middle;} +td>#recaptcha{margin-bottom:6px;} +div>#recaptcha{margin-bottom:9px;} +div.control-group.error{ +width:auto; +background:transparent; +border:0; +color:inherit; +padding:0; +background-repeat:repeat; +} + +/*============================================================= + OTHER RULES +==============================================================*/ + +/* Massimo Di Pierro fixed alignment in forms with list:string */ +form table tr{margin-bottom:9px;} +td.w2p_fw ul{margin-left:0px;} + +/* web2py_console in grid and smartgrid */ +.hidden{visibility:visible;} +.web2py_console input{ + display: inline-block; + margin-bottom: 0; + vertical-align: middle; +} +.web2py_console input[type="submit"], +.web2py_console input[type="button"], +.web2py_console button{ + padding-top:4px; + padding-bottom:4px; + margin:3px 0 0 2px; +} +.web2py_console a, +.web2py_console select, +.web2py_console input +{ + margin:3px 0 0 2px; +} +.web2py_grid form table{width:auto;} +/* auth_user_remember checkbox extrapadding in IE fix */ +.ie-lte9 input#auth_user_remember.checkbox {padding-left:0;} + +/*============================================================= + MEDIA QUERIES +==============================================================*/ + +@media only screen and (max-width:979px){ + body{padding-top:0px;} + #navbar{top:5px;} + div.flash{right:5px;} + .dropdown-menu ul{visibility:visible;} +} +@media only screen and (max-width:479px){ + body{ + padding-left:10px; + padding-right:10px; + } + .navbar-fixed-top,.navbar-fixed-bottom { + margin-left:-10px; + margin-right:-10px; + } + input[type="text"],input[type="password"],select{ + width:95%; + } +} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap_nojs.css b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap_nojs.css new file mode 100644 index 000000000..0ec7312f0 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/css/web2py_bootstrap_nojs.css @@ -0,0 +1,122 @@ +/*============================================================= + BOOTSTRAP DROPDOWN MENU +==============================================================*/ + +.dropdown-menu ul{ + left:100%; + position:absolute; + top:0; + visibility:hidden; + margin-top:-1px; +} +.dropdown-menu li:hover ul{visibility:visible;} +.navbar .dropdown-menu ul:before{ + border-bottom:7px solid transparent; + border-left:none; + border-right:7px solid rgba(0, 0, 0, 0.2); + border-top:7px solid transparent; + left:-7px; + top:5px; +} +.nav > li.dropdown > a:after { + border-left: 4px solid transparent; + border-right: 4px solid transparent; + border-top: 4px solid #000000; + content: ""; + display: inline-block; + height: 0; + opacity: 0.7; + vertical-align: top; + width: 0; + + margin-left: 2px; + margin-top: 8px; + + border-bottom-color: #FFFFFF; + border-top-color: #FFFFFF; +} +.dropdown-menu span{display:inline-block;} +ul.dropdown-menu li.dropdown > a:after { + border-left: 4px solid #000; + border-right: 4px solid transparent; + border-bottom: 4px solid transparent; + border-top: 4px solid transparent; + content: ""; + display: inline-block; + height: 0; + opacity: 0.7; + vertical-align: top; + width: 0; + + margin-left: 8px; + margin-top: 6px; +} + +ul.nav li.dropdown:hover ul.dropdown-menu { + display: block; +} + +.open >.dropdown-menu ul{display:block;} /* fix menu issue when BS2.0.4 is applied */ + +/*============================================================= + BOOTSTRAP SUBMIT BUTTON +==============================================================*/ + +input[type='submit']:not(.btn) { +display: inline-block; +padding: 4px 14px; +margin-bottom: 0; +font-size: 14px; +line-height: 20px; +color: #333; +text-align: center; +text-shadow: 0 1px 1px rgba(255, 255, 255, 0.75); +vertical-align: middle; +cursor: pointer; +background-color: whiteSmoke; +background-image: -webkit-gradient(linear,0 0,0 100%,from(white),to(#E6E6E6)); +background-image: -webkit-linear-gradient(top,white,#E6E6E6); +background-image: -o-linear-gradient(top,white,#E6E6E6); +background-image: linear-gradient(to bottom,white,#E6E6E6); +background-image: -moz-linear-gradient(top,white,#E6E6E6); +background-repeat: repeat-x; +border: 1px solid #BBB; +border-color: rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.1) rgba(0, 0, 0, 0.25); +border-bottom-color: #A2A2A2; +-webkit-border-radius: 4px; +-moz-border-radius: 4px; +border-radius: 4px; +filter: progid:dximagetransform.microsoft.gradient(startColorstr='#ffffffff',endColorstr='#ffe6e6e6',GradientType=0); +filter: progid:dximagetransform.microsoft.gradient(enabled=false); +-webkit-box-shadow: inset 0 1px 0 rgba(255, 255, 255, 0.2),0 1px 2px rgba(0, 0, 0, 0.05); +-moz-box-shadow: inset 0 1px 0 rgba(255,255,255,0.2),0 1px 2px rgba(0,0,0,0.05); +box-shadow: inset 0 1px 0 rgba(255, 255, 255, 0.2),0 1px 2px rgba(0, 0, 0, 0.05); +} + +input[type='submit']:not(.btn):hover { +color: #333; +text-decoration: none; +background-color: #E6E6E6; +background-position: 0 -15px; +-webkit-transition: background-position .1s linear; +-moz-transition: background-position .1s linear; +-o-transition: background-position .1s linear; +transition: background-position .1s linear; +} + +input[type='submit']:not(.btn).active, input[type='submit']:not(.btn):active { +background-color: #E6E6E6; +background-color: 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100644 index 000000000..812cb56b2 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/browser.html @@ -0,0 +1,9 @@ + + + + + + + + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/drawtree.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/drawtree.js new file mode 100644 index 000000000..a93a4586a --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/drawtree.js @@ -0,0 +1,2188 @@ +/* +@licstart The following is the entire license notice for the JavaScript code in this page. + + Copyright (c) 2013, Cody Hinchliff + Copyright (c) 2013, Joseph W. Brown + Copyright (c) 2013, Jim Allman + Copyright (c) 2013, Mark Holder + + All rights reserved. + + Redistribution and use in source and binary forms, with or without + modification, are permitted provided that the following conditions are met: + + Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + + Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + + THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE + DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE + FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL + DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR + SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER + CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, + OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE + OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +@licend The above is the entire license notice for the JavaScript code in this page. +*/ + +/*jslint indent: 4 */ +/*globals XMLHttpRequest, Raphael, $, window, location, History, pageUsesHistory, nodeDataLoaded, historyStateToURL, historyStateToWindowTitle*/ + +// factor function -- gradually going to encapsulate argus functions here for better +// information hiding and avoiding putting a lot of things into the global namespace +// Attributes of spec: +// domSource = "ottol" The name of the source of trees. Currently only "ottol" and the latest synthetic tree +// (e.g. "opentree1.2") are supported. +// nodeID = the ID for the node (according to the system of the service indicated by domSource) +// if nodeID or domSource are lacking, they will *both* be parsed out of the URL query string (location.search) +// from node_id and domsource url-encoded GET parameters. If they are not found there, the defaults are +// domSource="ottol" and nodeID = "805080" +// container - DOM element that will contain the argus object +function createArgus(spec) { + "use strict"; + var o; + var argusObj; + var paper; + // use a series of "empty" elements to organize others by depth + var dividerBeforeEdges, dividerBeforeLabels, dividerBeforeHighlights, dividerBeforeNodes, dividerBeforeAnchoredUI; + var getHoverHandlerNodeAndEdge; + var getHoverHandlerCluster; + var getClickHandlerNode; + var getClickHandlerCluster; + var makeRoomForOpeningCluster; + var getBackClickHandler; + var getForwardClickHandler; + var argusZoomLevel; + var argusScrollTop; + var argusScrollLeft; + var zoomStep; + var setZoomAndReframeView; + var getClickHandlerAltRelLine; + var getHoverHandlerProvenanceHighlight; + var getClickHandlerProvenanceHighlight; + + var isNumeric = function (n) { + return !isNaN(parseFloat(n)) && isFinite(n); + }; + + + // get defaults for the root nodeID and domSource + if (spec.nodeID === undefined || spec.domSource === undefined) { + o = (function (q) { + // simple function to get nodeID and domSource the assuming ignored?key1=val1&key2=val2 structure to q + var toks, i, arg; + var ret = {}; + var firstSubstr, qListStr; + if (q) { + firstSubstr = q.substr(1); + if (firstSubstr) { + qListStr = String(firstSubstr.split("?")); + if (qListStr) { + toks = qListStr.split("&"); + for (i = 0; i < toks.length; i++) { + arg = toks[i].split("="); + if (arg[0] === "node_id") { + ret.nodeID = arg[1]; + } else if (arg[0] === "domsource") { + ret.domSource = arg[1]; + } + } + } + } + } + return ret; + }(location.search)); + spec.nodeID = o.nodeID === undefined ? "805080" : o.nodeID; + spec.domSource = o.domSource === undefined ? "ottol" : o.nodeID; + } + if (spec.container === undefined) { + spec.container = $("body")[0]; + } + if (spec.treemachineDomain === undefined) { + spec.treemachineDomain = "http://opentree-dev.bio.ku.edu:7474"; + } + if (spec.taxomachineDomain === undefined) { + spec.taxomachineDomain = "http://opentree-dev.bio.ku.edu:7476"; + } + if (spec.useTreemachine === undefined) { + spec.useTreemachine = true; // for now, this is always true + } + if (spec.useSyntheticTree === undefined) { + spec.useSyntheticTree = true; + } + if (spec.maxDepth === undefined) { + spec.maxDepth = 4; + } + argusObj = { + "nodeID": spec.nodeID, + "domSource": spec.domSource, + "container": spec.container, + "treemachineDomain": spec.treemachineDomain, + "taxomachineDomain": spec.taxomachineDomain, + "useTreemachine": spec.useTreemachine, + "useSyntheticTree": spec.useSyntheticTree, + /* parsed JSON for the current tree view */ + "treeData": null, + "fontScalar": 2.6, // multiplied by radius to set font size + "minTipRadius": 5, // the minimum radius of the node/tip circles. "r" in old argus + "nodeDiamScalar": 1.0, // how much internal nodes are scaled by logleafcount + "nodesWidth": 100, // the distance between parent/child nodes + // TODO: try a wider setting (180?), or adapt to screen-width + "nubDistScalar": 4, // the x/y distance of the nub from its child + "tipOffset": 300, // distance from right margin at which leaf nodes are drawn + "xLabelMargin": 10, // the distance of the labels from the nodes + "xOffset": 0, // rightmost edge of view-tree; this is set in loadData call before drawing nodes + "yNodeMargin": 4, // whitespace above/below nodes + "yOffset": 10, // distance from top margin at which topmost nodes are drawn; also set in loadData + "yOffsetDefault": 10, // distance from top margin at which topmost nodes are drawn; also set in loadData + /* colors for the tree view */ + "bgColor": "#fff", + "altPColor": "#c69", + "altPLinkColor": "#900", + "altRelColor": "#f00", + "nodeColor": "#999", + "actualLeafColor": "#333", + "visibleLeafColor": "#fff", // ie, click to see more descendants + "nodeHoverColor": "#ff3333", + "pathColor": "#999", + "strongPathColor": "#000", + "labelColor": "#000", + "extinctNodeColor": "#c96", // or maybe #963 + "extinctPathColor": "#c96", + "extinctLabelColor": "#a74", + "provenanceHighlightColor": "#3333ff", + "provenanceHighlightLabelColor": "#3333ff", + "provenanceHighlightLabelBackgroundColor": "#ffffff", + "tipColor": "#999", + "tipHoverColor": "#ff3333", + "currMaxDepth": spec.maxDepth, + "backStack": [], // args to previous displayNode calls + "forwardStack": [], // args to displayNode calls after the back button has been clicked + "currDisplayContext": undefined, //arg to most recent displayNode call + // add dagger † before (or after) extinct node labels + "leadingDagger": "\u2020 ", + "trailingDagger": " \u2020", + clusters: {}, // a registry of clustered child-nodes, keyed to the parent-node's ID + maxClusterSize: 100, // try to bundle sets of n children + minClusterSize: 10, // add fewer to the previous cluster (or unclustered children) instead + maxUnclusteredNodes: 30, // show the most interesting n nodes outside of clusters + + toggleAltBoxX: 55, + toggleAltBoxY: 6, + sourceTextBoxX: 10, + sourceTextBoxY: 35, + backArrowX: 10, + backArrowY: 10, + anchoredControls: null, + provenanceHighlight: null, + highlightedNodeInfo: null, + targetNodeY: 0, // used to center the view (vertically) on the target node + + supportingTaxonomyVersion: null, + + // use Javascript pseudo-classes (defined below) to make tree operations more sensible + makeNodeTree: function(key, value) { + // expects to get root JSON object? or each object (or key/val pair) as it's parsed? + if (value.node_id) { + // it's a tree node! + + // assign parent ID to children, for fast tree traversal + if (value.children) { + for (var i = 0; i < value.children.length; i++) { + value.children[i].parentNodeID = value.node_id; + } + } + + if (value.lineage) { + // assign parent IDs up the "root-ward" chain of nodes + var testChild = value; + $.each(value.lineage, function(i, testParent) { + testChild.parentNodeID = testParent.node_id; + testChild = testParent; // and move to *its* parent + }); + } + + // convert to desired JS pseudo-class + return $.extend( new ArgusNode(), value ); + } + + // more grooming (sorting, clustering, etc) happens later, in setupArgusNode() + return value; + }, + + // utility methods for nodeTree above + getArgusNodeByID: function ( nodeID ) { + // NOTE depends on treeview.js methods + return getTreeDataNode( function(node) { + return (node.node_id === nodeID); + }); + }, + // TODO: add a method to get node by OTT id? + + getZoomInHandler: function () { + return function() { + setZoomAndReframeView('+'); + return false; + }; + }, + getZoomOutHandler: function () { + return function() { + setZoomAndReframeView('-'); + return false; + }; + }, + getToggleConflictsHandler: function() { + return null; + } + }; + + + argusObj.nodeHeight = (2 * argusObj.minTipRadius) + argusObj.yNodeMargin; + // helper function to create the URL and arg to be passed to URL. + // Argument: + // o.nodeID + // o.domSource (default "ottol") @TEMP will need to be modified for cases when ottol is not the value + // o.httpMethod (defaul "POST") + // Return an object with + // url -- URL for ajax call + // data -- object to be sent to the server + // httpMethod -- (currently "POST") + argusObj.buildAjaxCallInfo = function (o) { + var url; + var ds; + var ajaxData; + + if (this.useTreemachine) { + if (this.useSyntheticTree) { + url = getSyntheticTree_url; + } else { + console.error('buildAjaxCallInfo(): we need another URL!?'); + return; + } + // default is the classic "tree 4 in phylografter" + ds = o.domSource === undefined ? "4" : o.domSource; + ajaxData = { + "synth_id": ds, // TODO: Omit this paramter if it causes trouble! + "format": "arguson", + "height_limit": this.currMaxDepth + }; + // send *either* OTT id or node id (but not both) + if (o.nodeID !== undefined) { + ajaxData.node_id = String(o.nodeID); // for later analysis + } else { + if (o.ott_id !== undefined) { + ajaxData.ott_id = Number(o.ott_id); + } + } + } else { + /* TODO: Restore the ability to fetch conflict information from taxomachine? + url = getConflictTaxJsonAltRel_url.replace('{nodeID}', o.nodeID); + // @TEMP assuming ottol + ds = o.domSource === undefined ? "ottol" : o.domSource; + ajaxData = {"domsource": ds}; // phylotastic TNRS API wants domsource, MTH believes. + */ + console.error("AJAX calls via taxomachine are no longer supported."); + return; + } + return { + "url": url, + "data": ajaxData, + "httpMethod": "POST", //@TEMP assuming ottol + "domSource": ds + }; + }; + + argusObj.revealAllVisibleTreeElements = function() { + /* Update argus viewbox to show all visible items (via scrollbars). + * For a seamless effect, we need to simultaneously change the size, + * position(?), and viewbox of the RaphaelJS (SVG) canvas. + * + * This is because the SVG element (regardless of its 'overflow' style) + * dictates the beahavior of scrollbars in the argus view. So for a + * seamless transition, e.g. when expanding a cluster, we need + * to preserve the current scale and *apparent* position of tree + * elements, but (potentially) modify the size and position of the main + * SVG element so that we can scroll to any visible part of the tree. + * Tricky stuff! + * + * After some reflection, I think the key is that the SVG's internal + * viewBox should always match its visible contents (plus a small + * cosmetic margin), and that the SVG element should follow these changes + * in both its size and relative position. Let's tweak all related + * code to do this, instead of the old system, which was: + * Let's reckon the default width and height based on the "maximum + * reasonable extent" of all visible and collapsed nodes. + * Instead, let the (visible) content drive the viewBox, and + * that in turn sets the size and location of the SVG element, always. + * + * Is it possible that default viewBox will "follow" visible contents? + * NO, we need to maintain viewBox manually as things change. + * + * Let's also set its preserveAspectRatio to "none", so that we can + * clearly see stretched graphics due to errors on our updated view. + */ + if (!paper.canvas) { + console.warn('revealAllVisibleTreeElements - NO paper.canvas found, skipping update'); + return; + } + + // allow distortion to reveal serious distortion ASAP + paper.canvas.setAttribute('preserveAspectRatio','none'); + // capture old viewbox (if any) and SVG scrollbar position + var svgContainer = $(paper.canvas)[0].parentElement, + oldViewBox = paper.canvas.viewBox.baseVal || null; + // measure the extent of the newly visible tree + var newBBox = paper.canvas.getBBox(); + // add a little padding, so we can see that labels are complete + var margin = 6, + newLeft = newBBox.x - margin, + newTop = newBBox.y - margin, + newWidth = newBBox.width + (margin*2), + newHeight = newBBox.height + (margin*2); + paper.setViewBox(newLeft, newTop, newWidth, newHeight); + // set the SVG element's size to show this fully + paper.setSize(newWidth * argusZoomLevel, newHeight * argusZoomLevel); + // update scrollbars to match old position as best we can + svgContainer.scrollLeft = argusScrollLeft; + svgContainer.scrollTop = argusScrollTop; + }; + + argusObj.loadData = function (o) { + // accepts three named arguments: + // o.url the address to which the HTTP request is sent + // o.data arguement (object of str) to be sent to the URL as an argument + // o.httpMethod e.g. "GET" or "POST"; "POST" is the default + // o.domSource + // + var dataStr = JSON.stringify(o.data); + var domSource = o.domSource === undefined ? "ottol" : o.domSource; + var ottID; + if ('ott_id' in o.data) { + ottID = Number(o.data.ott_id); + } else if (o.data.node_id.indexOf('ott') === 0) { + // strip leading 'ott' from node_id to recover numeric OTT id + ottID = Number( o.data.node_id.replace('ott','') ) || 0; + } + var argusLoadSuccess = function (json, textStatus, jqXHR) { + var argusObjRef = this; + argusObjRef.treeData = json.arguson; + // Determine the maximum node depth (height_limit or less) found in this subtree + var node = argusObjRef.treeData; + var getSubtreeDepth = function(node) { + /* Find the deepest of its childrens' subtrees. While we're + * traversing the tree, let's also set each node's num_tips_in_view! + */ + var maxChildDepth = 0, + descendantTipsInView = 0; + if (node.children) { + for (var i = 0; i < node.children.length; i++) { + var childNode = node.children[i]; + var childDepth = getSubtreeDepth( childNode ); + maxChildDepth = Math.max(childDepth, maxChildDepth); + // Count any tips found, and descendant tips for internal nodes + descendantTipsInView += (childNode.num_tips_in_view || 1); + } + node.num_tips_in_view = descendantTipsInView; + } else { + // This node is a tip in the current view! + node.num_tips_in_view = 0; + } + // add this node to depth, plus that of its deepest child + return maxChildDepth + 1; + } + argusObjRef.treeData.max_node_depth = getSubtreeDepth(node) - 1; + + // get the supporting taxonomy (OTT) version for comparison below + var ottInfo = $.map( argus.treeData.source_id_map, function( value, key ) { + // return info only for taxonomic sources + return ('taxonomy' in value) ? value : null; + })[0]; + if (ottInfo && 'taxonomy' in ottInfo) { + argus.supportingTaxonomyVersion = ottInfo['taxonomy']; + } + if (!argus.supportingTaxonomyVersion) { + console.warn("No supporting OTT version found!"); + return; + } + + // final setup of tree-view object hierarchy + // recursive marking of depth in local tree + var setupArgusNode = function (node, depth) { + node.nodeDepth = depth; // assume this is a number (where 0 = local root) + + // slightly different, this is which column of nodes will hold this one + // (where 0 = the right-most (leaf nodes) column, higher = further left) + node.treeColumn = node.isLocalLeafNode() ? 0 : (argusObj.treeData.max_node_depth - node.nodeDepth); + // TODO: pre-calculate node.x from this, if it never changes..? + + if (node.children) { + // sort and cluster children to build its display list + + /* Prioritize phylogeny-based edges, use alphabetic order, and + * use clustering to deal with lots of uninteresting + * (taxonomy-based) edges. + */ + var nchildren = node.children.length, + nodesWithHybridSupport = [ ], + nodesWithPhyloSupport = [ ], + nodesWithoutPhyloSupport = [ ], + clusters = argusObj.clusters; + + // sort children alphabetically first.. + node.children.sort(alphaSortByName); + // group children based on type of edge support + for (var i = 0; i < nchildren; i++) { + var testChild = node.children[i], + sb = getSupportingSourceIDs(testChild); + //sb = testChild.supported_by; + testChild.supportedByTaxonomy = (argus.supportingTaxonomyVersion in sb); + testChild.supportedByPhylogeny = Object.keys(sb).length > (testChild.supportedByTaxonomy ? 1 : 0); + + if (testChild.supportedByPhylogeny && testChild.supportedByTaxonomy) { + nodesWithHybridSupport.push(testChild); + } else if (testChild.supportedByPhylogeny) { + nodesWithPhyloSupport.push(testChild); + } else { + nodesWithoutPhyloSupport.push(testChild); + } + } + var nWithHybrid = nodesWithHybridSupport.length, + nWithPhylo = nodesWithPhyloSupport.length, + nWithoutPhylo = nodesWithoutPhyloSupport.length; + + // mark some less-interesting nodes for clustering + // + // sort first by number of descendants, so we always show the most + // populous clades + nodesWithoutPhyloSupport.sort(sortByDescendantCount); + var nUnclusteredNodes = argusObj.maxUnclusteredNodes - nWithHybrid - nWithPhylo; + var clusteredNodes = nodesWithoutPhyloSupport.slice( nUnclusteredNodes ); + if (clusteredNodes.length < argusObj.minClusterSize) { + // never mind! there's not enough to make a decent cluster + clusteredNodes = [ ]; + } + var firstClusteredNode = clusteredNodes[0], // capture BEFORE re-sorting! + nClustered = clusteredNodes.length, + nClusteredRemaining, + currentCluster = null, + nInCurrentCluster = 0; + + // re-sort the smaller ones by name, then sort into clusters + clusteredNodes.sort(alphaSortByName); + + for (i = 0; i < nClustered; i++) { + testChild = clusteredNodes[i]; + /// testChild.nameStartsWith = (testChild.name.length > 0 ? testChild.name[0].toLowerCase() : ''); + if (nInCurrentCluster > argusObj.maxClusterSize) { + // this cluster is full, start another one? + if (testChild.name.indexOf(currentCluster.lastName) === 0) { // ie, starts with... + // no, push this node into the last one... + } else { + // are there enough nodes left to form a good cluster? + nClusteredRemaining = nClustered - i; + if (nClusteredRemaining > argusObj.minClusterSize) { + // add a new cluster and start filling it + var newCluster = $.extend( new ArgusCluster(), { + nodes: [ ], + firstName: testChild.name, + lastName: testChild.name, + parentNodeID: node.node_id + }); + clusters[node.node_id].push(newCluster); + currentCluster = newCluster; + nInCurrentCluster = 0; + } + // else toss the remaining few children into the last cluster + } + } + if (!currentCluster) { + // add entry for this node, and its first (empty) cluster + newCluster = $.extend( new ArgusCluster(), { + nodes: [ ], + firstName: '', + lastName: '', + parentNodeID: node.node_id + }); + clusters[ node.node_id ] = [ newCluster ]; + currentCluster = newCluster; + nInCurrentCluster = 0; + } + currentCluster.nodes.push(testChild); + if (currentCluster.firstName === '') { + currentCluster.firstName = testChild.name; + } + currentCluster.lastName = testChild.name; + nInCurrentCluster++; + } + // use names to label each cluster alphabetically + + // Use these groups and clusters to draw children + node.displayList = nodesWithHybridSupport.concat( nodesWithPhyloSupport ); + + nWithHybrid = nodesWithHybridSupport.length; + nWithPhylo = nodesWithPhyloSupport.length; + nWithoutPhylo = nodesWithoutPhyloSupport.length; + // some taxonomy-supported nodes may be hidden in clusters (ignore these) + for (i = 0; i < nWithoutPhylo; i++) { + // postorder traverse the children of this node + if (nodesWithoutPhyloSupport[i] === firstClusteredNode) { + // stop when we reach clustered nodes + break; + } + + node.displayList.push(nodesWithoutPhyloSupport[i]); + } + // add minimized clusters to the display list + if (clusters[node.node_id]) { + node.displayList = node.displayList.concat( clusters[node.node_id]); + } + } + + // recurse into its child nodes + if (node.children) { + for (i = 0; i < node.children.length; i++) { + setupArgusNode( node.children[i], depth + 1 ); + } + } + }; + + // clear the cluster registry first + argusObj.clusters = {}; + + // recursively populate any missing (implied) node names + buildAllMissingNodeNames(node); + + setupArgusNode(node, 0); + + var pheight, pwidth, sourcelabel, anchoredbg; + + //spec.container.text("proxy returned data..." + treeData); + // calculate view-specific geometry parameters + pheight = ((2 * argusObjRef.minTipRadius) + argusObjRef.yNodeMargin) * (node.num_tips_in_view); + pheight += argusObjRef.nubDistScalar * argusObjRef.minTipRadius; + + // for a narrow tree, push topmost nodes down away from the anchored widgets + if (pheight > 16 * argusObjRef.nodeHeight) { + argusObjRef.yOffsetDefault = 10; + } else { + var topBuffer = 8 * argusObjRef.nodeHeight; + argusObjRef.yOffsetDefault = topBuffer; + pheight += topBuffer; + } + argusObjRef.yOffset = argusObjRef.yOffsetDefault; + + // provide enough room for anchored widgets, more if needed for the tree + pheight = Math.max(pheight, 20 * argusObjRef.nodeHeight); + + pwidth = argusObjRef.nodesWidth * (node.max_node_depth + 1); + pwidth += 1.5 * argusObjRef.tipOffset + argusObjRef.xLabelMargin; + // NOTE that this might still clip super-wide labels, e.g. for a cluster + + argusObjRef.xOffset = pwidth - argusObjRef.nodesWidth - argusObjRef.tipOffset; + + hideSpinner(); + + if (argusObjRef.container === undefined) { + paper = new Raphael(10, 10, 10, 10); + } else { + paper = new Raphael(argusObjRef.container, 10, 10); + } + + // add dividers before anything else + dividerBeforeEdges = paper.text(0,0,''); + dividerBeforeLabels = paper.text(0,0,''); + dividerBeforeHighlights = paper.text(0,0,''); + dividerBeforeNodes = paper.text(0,0,''); + dividerBeforeAnchoredUI = paper.text(0,0,''); + + /* Gather all controls that should anchor to the scrolling viewport + * SUPPRESSING this for now, but kept in case we revisit this idea. + if (!argusObj.anchoredControls) { + argusObj.anchoredControls = paper.set(); + } + + // if we need a larger, shared background + anchoredbg = paper.rect(0,0,120,90).attr({ + "fill": this.bgColor, + "fill-opacity": 0.6, + "stroke": 'none' + }); + argusObj.anchoredControls.push(anchoredbg); + + // this should also anchor to the scrolling viewport + sourcelabel = paper.text(argusObjRef.sourceTextBoxX, + argusObjRef.sourceTextBoxY, + "source: " + domSource).attr({ + "font-size": String(argusObjRef.fontScalar * argusObjRef.minTipRadius) + "px", + "text-anchor": "start" + }); + argusObj.anchoredControls.push(sourcelabel); + */ + + // add (and hide) moving highlights for node and edge provenance + argusObj.provenanceHighlight = paper.set(); + // rect to allow scaling (vs path) + argusObj.provenanceHighlight.push( + paper.rect().attr({ + "x": -50, + "y": -2, + "width": 100, + "height": 4, + "fill": argusObj.provenanceHighlightColor, + "title": "Click to see properties for this edge", + "stroke": "none", + "cursor": "pointer" + }).insertBefore(dividerBeforeNodes) + ); + + argusObj.provenanceHighlight.push( + // Draw a lozenge shape, centered on its right focus + // see http://www.w3.org/TR/SVG/paths.html#PathDataEllipticalArcCommands + paper.path('M -20,-7.5 L 0,-7.5 A 7.5,7.5 0 0,1 0,7.5 L -20,7.5 A 7.5,7.5 0 0,1 -20,-7.5 Z').attr({ + "x": 0, + "y": 0, + "stroke": argusObj.provenanceHighlightColor, + "title": "Click to see properties for this node", // add name? + "stroke-width": 2, + "fill": argusObj.provenanceHighlightLabelBackgroundColor, + "cursor": "pointer" + }).insertBefore(dividerBeforeNodes) + ); + argusObj.provenanceHighlight.push( + paper.text().attr({ + "x": -20, + "y": 0, + "text": "i", + "title": "Click to see properties for this node", // add name? + "text-anchor": "middle", + "fill": argusObj.provenanceHighlightLabelColor, + "font-weight": "bold", + "font-family": "Courier, monospace", + "font-size": 12, + "cursor": "pointer" + }).insertBefore(dividerBeforeNodes) + ); + // hide until user rolls over a node or edge + argusObj.provenanceHighlight.hide(); + + argusObj.provenanceHighlight.hover( + getHoverHandlerProvenanceHighlight('OVER', argusObj.provenanceHighlight, {}), + getHoverHandlerProvenanceHighlight('OUT', argusObj.provenanceHighlight, { }) + ); + var handler = getClickHandlerProvenanceHighlight(); // just once! + // note that the target node's info is available as argusObj.highlightedNodeInfo + $.each(argusObj.provenanceHighlight.items, function(i, item) { + // we need to dig into the actual nodes to use jQuery binding + $(item.node).on('click contextmenu', handler); + }); + + // refresh tree + argusObjRef.nodesHash = {}; + argusObjRef.nodesWithCycles = []; + // draw the tree + argusObjRef.drawTree(); + /* Update the viewbox to include all visible elements (esp. + * ancestor nodes and long node+cluster labels) + */ + setZoomAndReframeView(); + + // Release the forced height of the argus viewport + $(this.container).css('height', ''); + + // if there's a page-level callback function, call it now + if (typeof nodeDataLoaded === 'function') { + nodeDataLoaded(node); + } + + // draw the cycles + argusObjRef.drawCycles(); + }; + var argusLoadFailure = function (jqXHR, textStatus, errorThrown) { + // Was this a taxon that didn't make it into synthesis, or some other error? + var mainFetchXHR = jqXHR; + var mainFetchJSON; + try { + // IF there was a JSON payload, we want to keep it (if the payload is + // empty/null, make an empty object) + mainFetchJSON = $.parseJSON(mainFetchXHR.responseText) || { }; + } catch(e) { + // make an empty object for now + mainFetchJSON = { }; + } + $.ajax({ + url: getTaxonInfo_url, + type: 'POST', + crossDomain: true, + contentType: 'application/json', + dataType: 'json', + data: JSON.stringify({ "ott_id": ottID }), // set above, defaults to 0 (invalid ID) if not an OTT taxon + complete: function( jqXHR, textStatus ) { + hideSpinner(); + // report errors or malformed data, if any + var errMsg; + if (textStatus !== 'success') { + // major server-side error, just show raw response for tech support + errMsg = '

Sorry, there was an error checking for taxon status.

'; + showErrorInArgusViewer(errMsg); + return; + } + // check to see if we got a taxon record, or an error in JSON + var json = $.parseJSON(jqXHR.responseText); + // if (json['ott_id'] === ottID) { TODO: use this when we switch to v3 taxonomy API! + if (json['ott_id'] === ottID) { + var taxoBrowserLink = getTaxobrowserLink('View this taxon in the taxonomy browser', ottID) + // the requested taxon exists in OTT, but is not found in the target tree + //errMsg = '

This taxon is in our taxonomy but not in our tree synthesis database.

' + + if (mainFetchJSON.broken) { + // parse this to learn more... + errMsg = '

This taxon is in our taxonomy but it\'s "broken" (not monophyletic) in the latest synthetic tree.

'; + if (mainFetchJSON.broken.mrca) { + // this is the ottid of its MRCA, a good next step for this user + var mrcaSynthViewURL = getSynthTreeViewerURLForNodeID( + '', // defaults to latest synthetic tree + mainFetchJSON.broken.mrca + ); + errMsg +='

View the MRCA of the members of this taxon in the synthetic tree

'; + } + var contestingTreeJSON = mainFetchJSON.broken.contesting_trees; + if (contestingTreeJSON) { + errMsg +='

Input phylogenies that conflict with this taxon:  

'; + errMsg +='
    '; + Object.keys(contestingTreeJSON).forEach(function(treeAndStudyID) { + + var parts = treeAndStudyID.split('@'); + var studyID = parts[0]; + var treeID = parts[1]; + var conflictURL = '/curator/study/view/{STUDY_ID}/?tab=trees&tree={TREE_ID}&conflict=ott' + .replace('{STUDY_ID}', studyID) + .replace('{TREE_ID}', treeID); + var conflictDetailsPanelID = 'conflicting-tree-details-'+ studyID +'-'+ treeID; + errMsg +='
  • ' + treeAndStudyID +' (show this tree in a new window)
    ...loading details..
    • '; + /* TODO: One or more AJAX fetches to retrieve study and tree names? + var treeName = "TODO"; + var compactRef = "TODO"; + errMsg +='   ('+ "tree '+ treeName +' in study '+ compactRef +'" +')'; + */ + /* Fetch more information about conflicting trees and + * studies; update the UI once we have the data. + */ + loadConflictingTreeDetails(studyID, treeID, conflictDetailsPanelID); + }); + errMsg +='
'; + + } + } else { + errMsg = '

This taxon is in our taxonomy but does not appear in the latest synthetic tree. This can happen for a variety of reasons,' + +' but the most probable is that is has a taxon flag (e.g. incertae sedis) that' + +' causes it to be pruned from the synthetic tree.

'; + if (json.flags && json.flags.length > 0) { + errMsg += '

The following flags were found on this taxon:

' + errMsg += '
    '; + $.each(json.flags, function(i, flag) { + errMsg += '
  • '+ flag +'
    • '; + }); + errMsg += '
'; + errMsg += '

See our taxonomy documentation for details on the meanings of each flag.

' + } + } + + errMsg +='

'+ taxoBrowserLink +'

'; + showErrorInArgusViewer( errMsg ); + } else { + // this is not a valid taxon id! Show the *original* error response from the failed argus fetch. + errMsg = '

Whoops! The call to get the tree around a node did not work out the way we were hoping it would.

'; + showErrorInArgusViewer( errMsg, mainFetchXHR.responseText ); + } + } + }); + }; + $.ajax({ + url: o.url, + type: o.httpMethod === undefined ? "POST" : o.httpMethod, + dataType: 'text nodeTree', // 'nodeTree' triggers converter below + data: dataStr, + context: argusObj, + crossDomain: true, + contentType: 'application/json', + converters: { + // serialize this JSON into dedicated pseudo-classes + 'text nodeTree': function(data) { + ///console.log(">>> pre-processing raw JSON string..." ); + // NOTE that jQuery's parseJSON() doesn't support the 'reviver' option + ///return $.parseJSON(data, argusObj.makeNodeTree); + return JSON.parse(data, argusObj.makeNodeTree); + } + }, + success: argusLoadSuccess, + error: argusLoadFailure + }); + }; + + argusObj.moveToNode = function (o) { + // if we're using History.js, all movement through the tree should be driven from history + if (History && History.enabled && "pageUsesHistory" in window && pageUsesHistory) { + // add expected values for minimal history entry + var stateObj = $.extend(true, {'nodeName': ''}, o); // deep copy of o, with default values if none supplied + History.pushState(stateObj, historyStateToWindowTitle(stateObj), historyStateToURL(stateObj)); + } else { + // proceed directly to display (emulate browser history State object) + updateTreeView({'data': o}); + } + // if we're still showing the initial "nudge" message, hide it now + if ($('#nudged-to-latest-synthetic-tree').is(':visible')) { + $('#nudged-to-latest-synthetic-tree').fadeOut(); + } + }; + + argusObj.displayNode = function (o) { + // update argus' domSource to reflect that of the new target node? + this.domSource = (o.domSource === undefined) ? this.domSource : o.domSource; + + var ajaxInfo = this.buildAjaxCallInfo({ + "nodeID": o.nodeID, + "ott_id": o.ott_id || "0", + "domSource": this.domSource + }); + + // Freeze the height of the argus viewport until new results arrive + $(this.container).css('height', $(this.container).css('height')); + + if (paper !== undefined) { + $(this.container).unbind("scroll"); + if (argusObj.anchoredControls) { + argusObj.anchoredControls.remove(); + argusObj.anchoredControls.clear(); + } + paper.clear(); + paper.remove(); + } + + clearPropertyInspector(); + showSpinner($(this.container)); + + /* The next 9 lines store the last call to displayNode. We'll need to move this, if we use other functions as "public" entry points of Argus calls*/ + if (o.storeThisCall === undefined || o.storeThisCall) { + if (this.currDisplayContext !== undefined) { + this.backStack.push(this.currDisplayContext); + } + } + this.currDisplayContext = $.extend(true, {}, o); // cryptic, eh? this is a deep copy of o + if (o.storeThisCall === undefined || o.storeThisCall) { + delete this.currDisplayContext.storeThisCall; + } + + this.nodeID = o.nodeID; + this.loadData(ajaxInfo); + setZoomAndReframeView(); + return this; + }; + + // create closure to access node attributes when hovering in/out + getHoverHandlerNodeAndEdge = function (hoverState, shape, shapeAttributes, nodeInfo) { + ///console.log("CALL getHoverHandlerNodeAndEdge - "+ hoverState); + var targetShape = shape; + return function () { + ///console.log("INNER getHoverHandlerNodeAndEdge - "+ hoverState); + var srcInfo = $.extend(true, {}, targetShape.data('sourceNodeInfo')); + var nodeCircle, edgePath; + switch (targetShape.type) { + case 'circle': + nodeCircle = targetShape; + edgePath = paper.getById('node-branch-trigger-'+ srcInfo.nodeID); + break; + + case 'path': + nodeCircle = paper.getById('node-circle-'+ srcInfo.nodeID); + edgePath = targetShape; + break; + + default: + console.warn("getHoverHandlerNodeAndEdge(): Unexpected type for targetShape: '"+ targetShape.type +"'!"); + return; + } + + nodeCircle.attr(shapeAttributes); + switch (hoverState) { + case 'OVER': + // copy source-node values from the target node to the highlight + + argusObj.highlightedNodeInfo = srcInfo; + + // move the highlight to this node + argusObj.provenanceHighlight.transform('t' + nodeCircle.attr('cx') + ',' + nodeCircle.attr('cy')); + + if (edgePath) { + // move the highlight to this edge + // no easy x/y attributes for a path, need to use its bounding box + var bbox = edgePath.getBBox(false); + + argusObj.provenanceHighlight.forEach(function(element) { + if (element.type == 'rect') { + var xScale = (bbox.width / 100); + var pathScale = 'S '+ xScale +',1 t' + ((bbox.x + (bbox.width / 2.0)) / xScale) + ',' + bbox.y; + // 100 is the natural width of the hilight path + element.transform(pathScale); + element.show(); + } + }); + } + + argusObj.provenanceHighlight.show(); + + if (!edgePath) { + // hide edge-highlight rect if there's no upward edge + argusObj.provenanceHighlight.forEach(function(element) { + if (element.type == 'rect') { + element.hide(); + } + }); + } + break; + case 'OUT': + // do nothing for now + break; + default: + console.log('Unexpected value for hoverState: '+ hoverState); + } + }; + }; + getHoverHandlerCluster = function (hoverState, shape, shapeAttributes, label, labelAttributes, clusterInfo) { + var clusterShape = shape; + var clusterLabel = label; + return function () { + clusterShape.attr(shapeAttributes); + clusterLabel.attr(labelAttributes); + switch (hoverState) { + case 'OVER': + // copy source-node values from the target node to the highlight + var srcInfo = $.extend(true, {}, clusterShape.data('clusterInfo')); + + ///argusObj.highlightedNodeInfo = srcInfo; + break; + case 'OUT': + // do nothing for now + break; + default: + console.log('Unexpected value for hoverState: '+ hoverState); + } + }; + }; + getHoverHandlerProvenanceHighlight = function (hoverState, highlight, shapeAttributes, highlightInfo) { + var nodeHighlight = highlight; + return function (evt) { + switch (hoverState) { + case 'OVER': + nodeHighlight.attr(shapeAttributes); + break; + case 'OUT': + // are we REALLY outside the lozenge, or just over the text? + + // Test using client/page coordinates, instead of canvas. + // (This handles scaling, scrolling, etc. more reliably.) + var bbox = getClientBoundingBox( argusObj.provenanceHighlight ); + + if (Raphael.isPointInsideBBox( bbox, evt.pageX, evt.pageY )) { + // false alarm, it's just moved over text or the node circle + return; + } + + nodeHighlight.attr(shapeAttributes); + // hide the node highlight + argusObj.provenanceHighlight.hide(); + break; + default: + console.log('Unexpected value for hoverState (node highlight): '+ hoverState); + } + }; + } + + getClickHandlerNode = function (nodeID, domSource, nodeName) { + return function (e) { + /* Right-click ('contextmenu' event) should open a new window focused + * on this node; otherwise re-center the argus view in this window. + * + * N.B. Details on how a new window or tab appears depend on each browser, + * as well as popup blockers and user preferences! + */ + switch (e.type) { + case 'contextmenu': + var urlSafeNodeName = encodeURIComponent(nodeName); + var nodeURL = '/opentree/'+ domSource +'@'+ nodeID +'/'+ urlSafeNodeName; + var newWindow = window.open( nodeURL, '_blank' ); + if (newWindow) { + // if blocked by popup blocker, this is undefined + newWindow.focus(); + } + break; + + case 'click': + default: + argusObj.moveToNode({"nodeID": nodeID, + "domSource": domSource, + "nodeName": nodeName}); + } + }; + }; + getClickHandlerCluster = function (minimizedClusterParts, parentNodeID, clusterPosition, depthFromTargetNode, domSource, currentYoffset) { + return function () { + // clobber the minimized cluster + for (var i = 0; i < minimizedClusterParts.length; i++) { + minimizedClusterParts[i].remove(); + } + + var cluster = argusObj.clusters[ parentNodeID ][ clusterPosition ]; + // draw its children, starting at the X and Y coords for this cluster + + // flip its 'expanded' flag and remove it from the display list.. + cluster.expanded = true; + var parentNode = argusObj.getArgusNodeByID(parentNodeID); + var dlPos = $.inArray(cluster, parentNode.displayList); + // replace the minimized cluster with its nodes + var listBeforeCluster = parentNode.displayList.slice(0,dlPos); + var listAfterCluster = parentNode.displayList.slice(dlPos + 1); + parentNode.displayList = listBeforeCluster.concat( cluster.nodes, listAfterCluster ); + + // hide any stale highlight + argusObj.provenanceHighlight.hide(); + + // redraw entire tree with changes + argusObj.drawTree(); + setZoomAndReframeView(); + }; + }; + getBackClickHandler = function () { + return function () { + argusObj.forwardStack.push(argusObj.currDisplayContext); + o = argusObj.backStack.pop(); + o.storeThisCall = false; + argusObj.moveToNode(o); + }; + }; + getForwardClickHandler = function () { + return function () { + o = argusObj.forwardStack.pop(); + argusObj.moveToNode(o); + }; + }; + + // reckon zoom level as a proportion of 1.0 (="natural" size) + argusZoomLevel = null; + zoomStep = 1.2; + setZoomAndReframeView = function( newLevel ) { + if (argusZoomLevel && argusZoomLevel === newLevel) { + return; // do nothing + } + if (!paper || !paper.canvas) { + return; + } + if (typeof(argusZoomLevel) !== 'number') { + // set default size + argusZoomLevel = 1.0; + } + // read the current scrollbar positions of the argus view + var svgContainer = $(paper.canvas)[0].parentElement; + argusScrollLeft = svgContainer.scrollLeft; + argusScrollTop = svgContainer.scrollTop; + switch(newLevel) { + case '+': + argusZoomLevel *= zoomStep; + argusScrollLeft *= zoomStep; + argusScrollTop *= zoomStep; + break; + case '-': + argusZoomLevel /= zoomStep; + argusScrollLeft /= zoomStep; + argusScrollTop /= zoomStep; + break; + default: + if (typeof(newLevel) === 'number') { + // assume it's an explicit zoom level + var oldZoomLevel = (argusZoomLevel || 1.0); + argusZoomLevel = 1.0 * newLevel; + // reckon this change as a "custom zoomStep" + var zoomChange = newLevel / oldZoomLevel; + argusScrollLeft = 0.0 * zoomChange; + argusScrollTop = 0.0 * zoomChange; + } else { + // assume this is simply re-asserting the current zoom level (eg, in a new node) + } + } + // try to apply the new scale, while maintaining the current center point + argusObj.revealAllVisibleTreeElements(); + }; + + getClickHandlerAltRelLine = function (nodeFromAJAX) { + /* at some point we will probably want to retain a history of preferred altrelationships, etc. + * these should be stored/retrieved from a base-level query info object that is passed back + * and forth from the server. for now we are just keeping things simple and not remembering + * anything about previous relationships. + * var altrelids = // get altrels ; + * altrelids.push(child.altrels[j].altrelid); */ + return function () { + argusObj.moveToNode({"nodeID": nodeFromAJAX.parentid, + "domSource": nodeFromAJAX.source}); + }; + }; + getClickHandlerProvenanceHighlight = function () { + return function (e) { + /* Right-click ('contextmenu' event) should open a new window focused + * on this node; otherwise show this node's properties in the inspector. + * We'll use source-node values copied from the target node + * + * N.B. Details on how a new window or tab appears depend on each browser, + * as well as popup blockers and user preferences! + */ + switch (e.type) { + case 'contextmenu': + var info = argusObj.highlightedNodeInfo; + var urlSafeNodeName = encodeURIComponent(info.nodeName); + var nodeURL = '/opentree/'+ info.domSource +'@'+ info.nodeID +'/'+ urlSafeNodeName; + var newWindow = window.open( nodeURL, '_blank' ); + if (newWindow) { + // if blocked by popup blocker, this is undefined + newWindow.focus(); + } + break; + + case 'click': + default: + showObjectProperties( argusObj.highlightedNodeInfo ); + } + }; + }; + + // recursive function to draw nodes and branches for the "dominant" tree (the domSource) + var tempCounter = 1; + argusObj.drawNode = function(obj) { + // recursive (depth first, top down) through all sub-nodes for best layout + var node = obj.node; + var isTargetNode = obj.isTargetNode; + var parentNodeX = obj.parentNodeX; + if (!parentNodeX) { + // passed in arg is fastest, but this is now reliable + var parentNode = argusObj.getArgusNodeByID(node.parentNodeID); + parentNodeX = (parentNode) ? + argusObj.xOffset - (argusObj.nodesWidth * parentNode.treeColumn) : + // if no parent ID, assume it's the local root node + argusObj.xOffset - (argusObj.nodesWidth * argusObj.treeData.treeColumn); + } + var depthFromTargetNode = obj.depthFromTargetNode || 0; + var domSource = obj.domSource; + var fontSize = this.minTipRadius * this.fontScalar; + var curLeaf = obj.curLeaf; + var currentYoffset = obj.currentYoffset || argusObj.yOffset; + // build IDs for visible elements (to move or create) + var nodeCircleElementID = 'node-circle-'+ node.node_id; + var nodeLabelElementID = 'node-label-'+ node.node_id; + var nodeSpineElementID = 'spine-'+ node.node_id; + var nodeTriggerBranchElementID = 'node-branch-trigger-'+ node.node_id; + var nodeVisibleBranchElementID = 'node-branch-'+ node.node_id; + // manipulate the existing elements, if any + var circle = paper.getById(nodeCircleElementID); + var label = paper.getById(nodeLabelElementID); + var spine = paper.getById(nodeSpineElementID); + var triggerBranch = paper.getById(nodeTriggerBranchElementID); + var visibleBranch = paper.getById(nodeVisibleBranchElementID); + + // use standard reckoning for node's X coordinate + node.x = this.xOffset - (this.nodesWidth * node.treeColumn); + + var dlCount = node.displayList.length; + for (var i = 0; i < dlCount; i++) { + var dlChild = node.displayList[i]; + if (dlChild instanceof ArgusNode) { + argusObj.drawNode({ + "node": dlChild, + "domSource": domSource, + "curLeaf": curLeaf, + "isTargetNode": false, + "parentNodeX": node.x, + "currentYoffset": currentYoffset, + "depthFromTargetNode": depthFromTargetNode + 1 + }); + currentYoffset = dlChild.displayBounds.bottomY; + } else if (dlChild instanceof ArgusCluster) { + argusObj.drawCluster({ + "cluster": dlChild, + "clusterPosition": $.inArray(dlChild, node.getClusters()), // returns index + "domSource": domSource, + "parentNodeX": node.x, + "parentNodeExtinct": node.isExtinct(), + "currentYoffset": currentYoffset, + "depthFromTargetNode": depthFromTargetNode + }); + currentYoffset = dlChild.displayBounds.bottomY; + } else { + // something else? let's check it out... + console.log("ERROR: unexpected thing in displayList for '"+ node.name +"': "+ typeof(dlChild)); + ///debugger; + } + } + + var bounds; + if (dlCount === 0) { + node.y = currentYoffset + (this.nodeHeight / 2); + bounds = node.updateDisplayBounds(); + } else { + // now that we know the layout of its children, create (or update) this node + bounds = node.updateDisplayBounds(); + node.y = bounds.middleY; // average of display children's Y coords + } + + // temporary marking to test flow of recursion + ///node.name += (" ["+ tempCounter++ +"]"); + + // draw the main circle for this node + if (node.isLocalLeafNode()) { + node.r = node.isActualLeafNode() ? (this.minTipRadius * 0.7) : this.minTipRadius; + } else { + node.r = this.minTipRadius + this.nodeDiamScalar * Math.log(node.num_tips); + } + var nodeFill = node.isExtinct() ? this.extinctNodeColor : this.nodeColor; + var nodeStroke = node.isExtinct() ? this.extinctPathColor : this.pathColor; + // override for special cases + if (node.isActualLeafNode()) { + nodeFill = node.isExtinct() ? this.extinctNodeColor : this.actualLeafColor; + nodeStroke = this.bgColor; + } else if (node.isVisibleLeafNode()) { + nodeFill = this.visibleLeafColor; + } else if (isTargetNode) { + // add special styles for this? + } + if (circle) { + // update the existing circle + circle.attr({ + 'cx': node.x, + 'cy': node.y + }); + } else { + // create the new circle + circle = paper.circle( node.x, node.y, node.r).attr({ + "fill": nodeFill, + "title": "Click to move to this node", + "stroke": nodeStroke + }).insertBefore(dividerBeforeAnchoredUI); + circle.id = (nodeCircleElementID); + + // insert hover handler (node properties and navigation triggers) + circle.hover(getHoverHandlerNodeAndEdge('OVER', circle, { + "fill": this.nodeHoverColor + }), getHoverHandlerNodeAndEdge('OUT', circle, { + "fill": nodeFill + })); + + $(circle.node).on('click contextmenu', getClickHandlerNode(node.node_id, domSource, node.name)); + // copy source data into the circle element (for use by highlight) + circle.data('sourceNodeInfo', { + 'nodeID': node.node_id, + 'nodeName': node.name, + 'domSource': domSource + }); + + // if this node has cycles, record it; we will draw them once the tree is done + var nAltParents = (node.altrels === undefined ? 0 : node.altrels.length); + if (nAltParents > 0) { + this.nodesWithCycles.push(node.node_id); + } + // store the node for fast access later + this.nodesHash[node.node_id] = node; + } + + // label position varies based on which column we're in + var labelX, labelY, labelAnchor; + if (node.isLocalLeafNode()) { + labelX = node.x + this.xLabelMargin; + labelY = node.y; + labelAnchor = 'start'; + } else { + labelX = node.x - (node.r + 0.5); + labelY = node.y + (node.r + 0.5); + labelAnchor = 'end'; + } + + if (label) { + // update the existing label + label.attr({ + 'x': labelX, + 'y': labelY, + 'text': node.name + }); + } else { + // create the new label + var displayLabel; + if (node.isLocalLeafNode()) { + // always show labels for leaf nodes (in this view) + displayLabel = node.name; + } else { + // hide synthetic/compound node labels for internal (in this view) nodes + var compoundNodeNameDelimiter = ' + '; + var compoundNodeNamePrefix = '['; + var compoundNodeNameSuffix = ']'; + // N.B. this is determined using vars above, COPIED from treeview.js! + var isCompoundNodeName = ((typeof node.name === 'string') && + (node.name.indexOf(compoundNodeNameDelimiter) !== -1) && + (node.name.indexOf(compoundNodeNamePrefix) === 0) && + (node.name.indexOf(compoundNodeNameSuffix) === (node.name.length -1))); + displayLabel = (isCompoundNodeName ? '' : node.name || ''); + } + if (node.isExtinct()) { + if (labelAnchor === 'start') { + displayLabel = this.markLabelAsExtinct(displayLabel, 'LEADING'); + } else { + displayLabel = this.markLabelAsExtinct(displayLabel, 'TRAILING'); + } + } + label = paper.text(labelX, labelY, displayLabel).attr({ + 'text-anchor': labelAnchor, + "title": displayLabel, + "fill": node.isExtinct() ? this.extinctLabelColor : this.labelColor, + "font-size": fontSize + }).insertBefore(dividerBeforeHighlights); + label.id = (nodeLabelElementID); + } + + // create/update spine, if there are multiple display children + if (node.displayList.length > 1) { + var spineSt = "M" + node.x + " " + node.displayBounds.firstChildY + + "L" + node.x + " " + node.displayBounds.lastChildY; + + if (spine) { + // update the existing label + spine.attr({ + 'path': spineSt + }); + } else { + // create the new spine + spine = paper.path(spineSt).toBack().attr({ + "stroke": node.isExtinct() ? this.extinctPathColor : this.pathColor, + "stroke-linecap": 'round' + }).insertBefore(dividerBeforeLabels) + .id = (nodeSpineElementID); + } + } + + if (!isTargetNode) { + // draw/update its "upward" branch to the parent's spine + // TODO: nudge (vs create) if this already exists! + var lineDashes, lineColor, + //sb = node.supported_by, + sb = getSupportingSourceIDs(node), + supportedByTaxonomy = argus.supportingTaxonomyVersion in sb, + supportedByPhylogeny = Object.keys(sb).length > (supportedByTaxonomy ? 1 : 0); + + if (supportedByTaxonomy && supportedByPhylogeny) { + //lineDashes = '--..'; + lineDashes = ''; + lineColor = node.isExtinct() ? this.extinctPathColor : this.strongPathColor; + } else if (supportedByPhylogeny){ + lineDashes = ''; + lineColor = node.isExtinct() ? this.extinctPathColor : this.strongPathColor; + } else if (supportedByTaxonomy){ + lineDashes = '- '; + lineColor = node.isExtinct() ? this.extinctPathColor : this.pathColor; + } else { + lineDashes = '--..'; + lineColor = 'orange'; + } + + var branchSt = "M" + parentNodeX + " " + node.y + "L" + node.x + " " + node.y; + + if (triggerBranch && visibleBranch) { + // update the existing elements + triggerBranch.attr({ + 'path': branchSt + }); + visibleBranch.attr({ + 'path': branchSt + }); + } else { + // draw a wide, invisible path to detect mouse-over + triggerBranch = paper.path(branchSt).toBack().attr({ + "stroke-width": 5, + "stroke-linecap": 'butt', + "stroke": this.bgColor + }).insertAfter(dividerBeforeEdges); + triggerBranch.id = (nodeTriggerBranchElementID); + // NOTE that these are pushed behind all visible paths! + + // ... and a congruent, visible path + visibleBranch = paper.path(branchSt).toBack().attr({ + "stroke-width": 1, + "stroke-linecap": (lineDashes === '.') || (lineDashes === '--..') || (lineDashes === '--.') ? 'butt' : 'round', // avoids Chrome bug with dotted lines + round caps + "stroke-dasharray": lineDashes, + "stroke": node.isExtinct() ? this.extinctPathColor : this.pathColor + }).insertBefore(dividerBeforeLabels); + visibleBranch.id = (nodeVisibleBranchElementID); + + // assign hover behaviors + triggerBranch.hover(getHoverHandlerNodeAndEdge('OVER', triggerBranch, {}), getHoverHandlerNodeAndEdge('OUT', triggerBranch, {})); + + // copy node data into the path element (for use by highlight) + triggerBranch.data('sourceNodeInfo', { + 'nodeID': node.node_id, + 'nodeName': node.name, + 'domSource': domSource + }); + } + } + if (isTargetNode) { + // draw a series of ancestor nodes + this.targetNodeY = node.y; + + if (node.lineage) { + // try to draw upward path w/ up to 3 nodes, plus trailing edge if there's more + var upwardNode; + var maxUpwardNodes = 3; + var alphaStep = 0.15; + var xyStep = 25; + for (i = 0; i < node.lineage.length; i++) { + var startX = node.x - (xyStep * i); + var startY = node.y - (xyStep * i); + var endX = startX - xyStep; + var endY = startY - xyStep; + var pathOpacity = 1.0 - (alphaStep * (i+1)); + var ancestorNode = node.lineage[i]; + // build IDs for visible elements (to move or create) + nodeCircleElementID = 'node-circle-'+ ancestorNode.node_id; + nodeLabelElementID = 'node-label-'+ ancestorNode.node_id; + var nodeBranchElementID = 'node-branch-'+ ancestorNode.node_id; + // manipulate the existing elements, if any + circle = paper.getById(nodeCircleElementID); + label = paper.getById(nodeLabelElementID); + var branch = paper.getById(nodeBranchElementID); + + var upwardSt = "M" + startX+ "," + startY + "L" + endX + " " + endY; + if (branch) { + // update the existing branch + branch.attr({ + 'path': upwardSt + }); + } else { + // create the new branch + branch = paper.path(upwardSt).toBack().attr({ + "stroke": node.isExtinct() ? this.extinctPathColor : this.pathColor, + "stroke-linecap": 'butt', // REQUIRED if stroke-dasharray is '.' + "stroke-dasharray": '. ', + "opacity": pathOpacity + }).insertBefore(dividerBeforeLabels); + branch.id = (nodeBranchElementID); + } + + if (i < maxUpwardNodes) { + // draw node circle and label + labelX = endX - (this.minTipRadius * 1.25); + labelY = endY + (this.minTipRadius * 1.25); + if (circle && label) { + // update the existing circle and label + circle.attr({ + 'cx': endX, + 'cy': endY + }); + label.attr({ + 'x': labelX, + 'y': labelY + }); + + } else { + // create the new circle and label + circle = paper.circle(endX, endY, this.minTipRadius).attr({ + "fill": ancestorNode.isExtinct() ? this.extinctNodeColor : this.nodeColor, + "title": "Click to move to this node", + "stroke": ancestorNode.isExtinct() ? this.extinctPathColor : this.pathColor + }).insertBefore(dividerBeforeAnchoredUI); + circle.id = (nodeCircleElementID); + var displayLabel = (ancestorNode.name || ""); + if (ancestorNode.isExtinct()) { + displayLabel = this.markLabelAsExtinct(displayLabel, 'TRAILING'); + } + label = paper.text(labelX, labelY, displayLabel).attr({ + 'text-anchor': 'end', + "title": displayLabel, + "fill": ancestorNode.isExtinct() ? this.extinctLabelColor :this.labelColor, + "font-size": fontSize + }).insertBefore(dividerBeforeHighlights); + label.id = (nodeLabelElementID); + + // add handlers and metadata + $(circle.node).bind('click contextmenu', getClickHandlerNode(ancestorNode.node_id, domSource, ancestorNode.name)); + // copy source data into the circle element (for use by highlight) + circle.data('sourceNodeInfo', { + 'nodeID': ancestorNode.node_id, + 'nodeName': ancestorNode.name, + 'domSource': domSource + }); + circle.hover(getHoverHandlerNodeAndEdge('OVER', circle, { + "fill": this.nodeHoverColor + }), getHoverHandlerNodeAndEdge('OUT', circle, { + "fill": ancestorNode.isExtinct() ? this.extinctNodeColor : this.nodeColor + })); + } + + } + + if (i === maxUpwardNodes) { + break; // we've drawn a final path bit, now we're done + } + } + + } + } + } + + // add dagger † before (or after) the label of an extinct node + argusObj.markLabelAsExtinct = function(label, leadingOrTrailing) { + if ($.trim(label) === "") { + return ""; + } + if (leadingOrTrailing === 'TRAILING') { + return (label + this.trailingDagger); + } else { + return (this.leadingDagger + label); + } + }; + + argusObj.drawCluster = function (obj) { + var cluster = obj.cluster; + var parentNodeID = cluster.parentNodeID; + var parentNodeX = obj.parentNodeX; + var parentNodeExtinct = obj.parentNodeExtinct; + var depthFromTargetNode = obj.depthFromTargetNode; + var currentYoffset = obj.currentYoffset; + var clusterPosition = obj.clusterPosition; + var domSource = obj.domSource; + // build IDs for visible elements (to move or create) + var clusterBranchElementID = 'min-cluster-branch-'+ parentNodeID +'-'+ clusterPosition; + var clusterBoxElementID = 'min-cluster-box-'+ parentNodeID +'-'+ clusterPosition; + var clusterLabelElementID = 'min-cluster-label-'+ parentNodeID +'-'+ clusterPosition; + // manipulate the existing elements, if any + var branch = paper.getById(clusterBranchElementID); + var box = paper.getById(clusterBoxElementID); + var label = paper.getById(clusterLabelElementID); + + cluster.x = parentNodeX; + // match its parent node, useful when expanding cluster + var clusterLeftEdge = cluster.x + (this.nodesWidth / 3.0); + cluster.y = currentYoffset + (this.nodeHeight * 1.0); + var fontSize = this.minTipRadius * this.fontScalar; + // draw a short branch out to this cluster + var branchSt = "M" + parentNodeX + " " + cluster.y + "L" + clusterLeftEdge + " " + cluster.y; + if (branch) { + // update the existing path + branch.attr({ + 'path': branchSt + }); + } else { + // create the new path + branch = paper.path(branchSt).toBack().attr({ + "stroke-width": 1, + "stroke-linecap": 'butt', // REQUIRED if stroke-dasharray is '.' + "stroke-dasharray": '. ', + "stroke": parentNodeExtinct ? this.extinctPathColor : this.pathColor + }).insertBefore(dividerBeforeLabels); + branch.id = (clusterBranchElementID); + } + + if (box && label) { + // update the existing box and label + box.attr({ + 'x': clusterLeftEdge, + 'y': cluster.y - (this.nodeHeight / 2.0) + }); + label.attr({ + 'x': clusterLeftEdge + 8, + 'y': cluster.y + }); + } else { + // Draw the cluster label, then a surrounding shape (a lozenge that can hold 'Aaa - Zzz')? + var minimizedCluster = paper.set().insertAfter(dividerBeforeLabels); + // NOTE that we can't set (or retrieve) an ID on a Raphael set... + + // draw the cluster label + var clusterLabel = "more... ("+ cluster.firstName +" - "+ cluster.lastName +")"; + label = paper.text(clusterLeftEdge + 8, cluster.y - (this.nodeHeight * 0.0), clusterLabel).attr({ + 'text-anchor': 'start', + "title": clusterLabel, + "fill": parentNodeExtinct ? this.extinctLabelColor : this.labelColor, + "font-size": fontSize, + "cursor": "pointer" + }); + label.id = (clusterLabelElementID); + minimizedCluster.push(label); + + // draw the surrounding shape (appears on mouseover) + var defaultBoxWidth = this.nodesWidth * 3.5; + var minBoxWidth = label.getBBox().width + 16; + var boxWidth = Math.max(defaultBoxWidth, minBoxWidth); + box = paper.rect(clusterLeftEdge, cluster.y - (this.nodeHeight * 0.55), boxWidth, this.nodeHeight * 1.2).attr({ + "stroke": this.bgColor, + "stroke-width": 1, + "stroke-dasharray": '.', + "fill": this.bgColor, + "r": 4, // rounded corner (radius) + "cursor": "pointer" + }); + box.id = (clusterBoxElementID); + minimizedCluster.push(box); + label.toFront(); // else it's hidden behind the lozenge! + + // assign behaviors to replace the minimized cluster with its nodes + var minimizedClusterParts = [branch, minimizedCluster]; + minimizedCluster.click(getClickHandlerCluster( + minimizedClusterParts, + parentNodeID, + clusterPosition, + depthFromTargetNode, + domSource, + currentYoffset + )); + minimizedCluster.hover(getHoverHandlerCluster('OVER', + box, { "fill": this.nodeColor }, + label, { "fill": 'white' } + ), getHoverHandlerCluster('OUT', + box, { "fill": this.bgColor }, + label, { "fill": this.labelColor } + )); + } + cluster.updateDisplayBounds(); + } + + argusObj.drawTree = function(obj) { + // (re)draw the entire tree, starting from the target (local root) node + + // TODO: reset paper dimensions? + + this.yOffset = this.yOffsetDefault; + // TODO: modify this (as above) based on changing paper dimensions? + + var targetNode = this.treeData; + this.drawNode({ + "node": targetNode, + "domSource": this.domSource, + "curLeaf": 0, + "isTargetNode": true, + "parentNodeX": this.xOffset - (this.nodesWidth * targetNode.treeColumn), // * node.max_node_depth), + "currentYoffset": this.yOffset, + "depthFromTargetNode": 0 + }); + } + + argusObj.drawCycles = function () { + var curNub; + var tx, ty, i, j, child, cx, cy, nub; + var naltparents; + var parent, px, py, offset, dst1, dst2, dln1, dln2; + var togglelabel, togglebox, backStackPointer, forwardStackPointer, body; + var sst, altrelline, dln; + var bw, bh, altrellabel, altrellabelbox, altrellabeltext; + var x1, y1, y2; + var getClickHandlerAltRelLine; + var getHoverHandlerAltRelLineShow; + var getHoverHandlerAltRelLineHide; + var toggleAltRels; + var getNubLinkHoverHandler; + var getInfoBoxHoverHandlerShow, getInfoBoxHoverHandlerHide; + var infobox, nublabelbox, nublinks, linktext, thislink; + var fontSize = this.minTipRadius * this.fontScalar; + var curAltRel, curShowAltRelFn, curHideAltRelFn; + var altRelLineAttr = { + "stroke": this.altRelColor + }; + var altrelsset = paper.set(); + altrelsset.hidden = false; + + // create closure so we can affect properties when we hover in/out + getHoverHandlerAltRelLineShow = function (linetomodify, label, attributes) { + return function () { + linetomodify.attr(attributes); + label.show().toFront(); + }; + }; + + getHoverHandlerAltRelLineHide = function (linetomodify, label, attributes) { + return function () { + linetomodify.attr(attributes); + label.hide(); + }; + }; + + toggleAltRels = function (altrels) { + return function () { + if (altrels.hidden) { + altrels.show(); + altrels.hidden = false; + } else { + altrels.hide(); + altrels.hidden = true; + } + }; + }; + getNubLinkHoverHandler = function (nublinktomodify, attributes) { + return function () { + nublinktomodify.attr(attributes); + }; + }; + getInfoBoxHoverHandlerShow = function (cSet) { + return function () { + cSet.show(); + // bring the box to the front of the page + cSet[1].toFront(); + // put the links in front of the box + cSet[0].toFront(); + }; + }; + + getInfoBoxHoverHandlerHide = function (cSet) { + return function () { + cSet.hide(); + }; + }; + + // gather controls that should move together + if (!argusObj.anchoredControls) { + argusObj.anchoredControls = paper.set(); + } + + var conflictsInView = this.nodesWithCycles.length > 0; + if (conflictsInView) { + argusObj.getToggleConflictsHandler = function() { + return function() { + toggleAltRels(altrelsset); + } + }; + } else { + // disable (hide?) the toggle gadget + argusObj.getToggleConflictsHandler = function() { + return null; + }; + } + + /* + tx = this.toggleAltBoxX; + ty = this.toggleAltBoxY; + + var conflictLabel = "Show or hide conflicting relationships in this view"; + var disabledConflictLabel = "No conflicting relationships in this view"; + var toggleHeight = this.nodeHeight * 1.5; + togglebox = paper.rect(tx, ty, this.nodesWidth, toggleHeight).attr({ + "stroke": "black", + "stroke-width": 1, + "fill": this.bgColor, + "fill-opacity": 0.6, + "r": 4, // rounded corner (radius) + "cursor": "pointer", + "title": (conflictsInView) ? conflictLabel : disabledConflictLabel, + "opacity": (conflictsInView) ? 1.0 : 0.4 + }).insertAfter(dividerBeforeAnchoredUI) + .click(toggleAltRels(altrelsset)); + + argusObj.anchoredControls.push(togglebox); + + togglelabel = paper.text(tx + (this.nodesWidth/2), + ty + (toggleHeight / 2), + "Toggle conflicts").attr({ + "cursor": "pointer", + "text-anchor": "middle", + "font-size": fontSize, + "title": (conflictsInView) ? conflictLabel : disabledConflictLabel, + "opacity": (conflictsInView) ? 1.0 : 0.4 + }).insertAfter(dividerBeforeAnchoredUI); + + // label on top needs identical action as box + togglelabel.click(toggleAltRels(altrelsset)); + argusObj.anchoredControls.push(togglelabel); + */ + + /* These are just under-powered history, remove them for now.. + // add clickable Back and Forward pointers (now redundant with browser Back/Fwd buttons) + backStackPointer = forwardStackPointer = null; + backStackPointer = paper.path("M21.871,9.814 15.684,16.001 21.871,22.188 18.335,25.725 8.612,16.001 18.335,6.276z") + .attr({ + fill: "#000", + stroke: "none", + cursor: "pointer", + title: (argusObj.backStack.length > 0) ? "Show the previous view in history" : "No previous views in history", + opacity: (argusObj.backStack.length > 0) ? 1.0 : 0.3 + }); + if (argusObj.backStack.length > 0) { + backStackPointer.click(getBackClickHandler()); + } + argusObj.anchoredControls.push(backStackPointer); + + forwardStackPointer = paper.path("M30.129,22.186 36.316,15.999 30.129,9.812 33.665,6.276 43.389,15.999 33.665,25.725z") + .attr({ + fill: "#000", + stroke: "none", + cursor: "pointer", + title: (argusObj.forwardStack.length > 0) ? "Show the next view in history" : "No later views in history", + opacity: (argusObj.forwardStack.length > 0) ? 1.0 : 0.3 + }); + if (argusObj.forwardStack.length > 0) { + forwardStackPointer.click(getForwardClickHandler()); + } + argusObj.anchoredControls.push(forwardStackPointer); + */ + + /* Let's try to anchor some widgets in the upper left corner of the + * argus viewport. That means it needs to track the scroll of the + * viewport (container) instead of the page body. + */ + var $argusContainer = $(this.container); + $argusContainer.bind("scroll", function () { + // use relative transformation to match the viewport's X/Y scrolling + argusObj.anchoredControls.transform('t' + $argusContainer.scrollLeft() + ',' + $argusContainer.scrollTop()); + argusObj.anchoredControls.toFront(); + }); + // center the view on the target node + $argusContainer.scrollTop((this.targetNodeY) - ($argusContainer.height() / 2)); + + // disable default right-click behavior in the argus view + $argusContainer.bind("contextmenu", function (e) { + e.preventDefault(); + return false; + }); + + // for each node found to have more than one parent + for (i = 0; i < this.nodesWithCycles.length; i++) { + + // this node is the child + child = this.nodesHash[this.nodesWithCycles[i]]; + cx = child.x; + cy = child.y; + + // initialize nub object; it will contain links to topologies not present in the current tree + nub = {}; + nub.nodes = []; + + // for each alternative parent + naltparents = child.altrels.length; + for (j = 0; j < naltparents; j++) { + // try to find this parent in the current tree + curAltRel = child.altrels[j]; + parent = this.nodesHash[curAltRel.parentid]; + if (parent === undefined) { + // if the parent isn't in this tree, put it in the nub + nub.nodes.push(curAltRel); + } else { + // the parent is in the tree; get its coordinates + px = parent.x; + py = parent.y; + + // if the parent and child are vertically aligned, draw an offset line between them + if (px === cx) { + x1 = cx - this.minTipRadius; + if (py > cy) { + offset = Math.abs(cx - x1); + y1 = cy + offset; + y2 = py - offset; + } else { + offset = Math.abs(cx - x1); + y1 = cy - offset; + y2 = py + offset; + } + + // short diagonal connectors + dst1 = "M" + cx + " " + cy + "L" + x1 + " " + y1; + dst2 = "M" + x1 + " " + y2 + "L" + px + " " + py; + dln1 = paper.path(dst1).attr(altRelLineAttr); + dln2 = paper.path(dst2).attr(altRelLineAttr); + altrelsset.push(dln1); + altrelsset.push(dln2); + + // main vertical line + sst = "M" + x1 + " " + y1 + "L" + x1 + " " + y2; + altrelline = paper.path(sst).attr(altRelLineAttr); + + // if the parent and child are not vertically aligned, draw a straight line between them + } else { + dln = "M" + cx + " " + cy + "L" + px + " " + py; + altrelline = paper.path(dln).attr(altRelLineAttr); + } + altrelsset.push(altrelline); + + bw = 60; + bh = this.nodeHeight; + + altrellabel = paper.set(); + altrellabelbox = paper.rect((cx + px) / 2 - bw / 2, + (cy + py) / 2 - bh / 2, + bw, + bh).attr({ + "stroke": "black", + "fill": "white" + }).hide(); + altrellabeltext = paper.text((cx + px) / 2, + (cy + py) / 2, + curAltRel.source).attr({ + "font-size": fontSize + }).hide(); + altrellabel.push(altrellabelbox); + altrellabel.push(altrellabeltext); + curShowAltRelFn = getHoverHandlerAltRelLineShow(altrelline, + altrellabel, + {"stroke-width": 3 + }); + curHideAltRelFn = getHoverHandlerAltRelLineHide(altrelline, + altrellabel, + {"stroke-width": 1 + }); + altrelline.hover(curShowAltRelFn, curHideAltRelFn).click( + getClickHandlerAltRelLine(curAltRel) + ); + } + } + + // if there are parents not in the current tree, create a nub to represent them + if (nub.nodes.length > 0) { + // draw the nub + nub.x = cx - (this.minTipRadius * this.nubDistScalar); + nub.y = cy + (this.minTipRadius * this.nubDistScalar); + nub.line = "M" + cx + " " + cy + "L" + nub.x + " " + nub.y; + nub.dbr1 = paper.path(nub.line).attr(altRelLineAttr); + nub.circle = paper.circle(nub.x, nub.y, this.minTipRadius).attr({ + "fill": this.altPColor, + "stroke": this.pathColor + }); + + // calc geometry for the nub info box, which contains links to alt topologies + infobox = paper.set(); + infobox.w = this.nodesWidth * 2 + (this.xLabelMargin * 2); + infobox.h = this.nodeHeight * (nub.nodes.length + 1); + infobox.x = nub.x - infobox.w; + infobox.y = nub.y; + // draw the info box container + nublabelbox = paper.rect(infobox.x, infobox.y, infobox.w, infobox.h).attr({ + "fill": "white" + }); + // generate links for the infobox; use a paper.set object so we can easily toggle transparency + nublinks = paper.set(); + for (j = 0; j < nub.nodes.length; j++) { + curNub = nub.nodes[j]; + // the link labels are the names of the corresponding sources + linktext = curNub.parentname + " > " + curNub.source; + // links are drawn in a vertical sequence within the infobox container + thislink = paper.text(infobox.x + this.xLabelMargin, + (infobox.y + j) * this.nodeHeight, + linktext).attr({ + "text-anchor": "start", + "fill": this.labelColor, + "font-size": fontSize + }).click(getClickHandlerAltRelLine(curNub)); + // assign hover behaviors + thislink.hover(getNubLinkHoverHandler(thislink, { + "fill": this.altPLinkColor + }), getNubLinkHoverHandler(thislink, { + "fill": "black" + })); + + nublinks.push(thislink); + } + + // add links and infobox container to the infobox object, hide it from view + infobox.push(nublinks); + infobox.push(nublabelbox); + infobox.hide(); + // assign behaviors + nub.circle.hover(getInfoBoxHoverHandlerShow(infobox), + getInfoBoxHoverHandlerHide(infobox) + ); + infobox.hover(getInfoBoxHoverHandlerShow(infobox), + getInfoBoxHoverHandlerHide(infobox) + ); + } + } + }; + return argusObj; +} + +Array.prototype.average = function () { + "use strict"; + var sum = 0; + var count = 0; + var len = this.length; + var i; + for (i = 0; i < len; i++) { + sum += this[i]; + count++; + } + return sum / count; +}; + +function alphaSortByName(a,b) { + var aName = a.name.toLowerCase(), + bName = b.name.toLowerCase(); + if (aName > bName) return 1; + if (aName < bName) return -1; + return 0; +} +function sortByDescendantCount(a,b) { + if (a.num_tips > b.num_tips) return 1; + if (a.num_tips < b.num_tips) return -1; + return 0; +} + +/* Let's deserialize tree-view JSON elements into useful pseudo-classes. This should + * simplify management of dynamic layouts, clustering, etc. + */ +function ArgusNode() { // constructor + // maintain ordered-and-clustered contents? + this.nodeDepth = 0; // 0 = root node, higher for descendants + this.treeColumn = 0; // 0 = rightmost (leaf nodes), higher = further left + this.displayList = [ ]; // refs to visible nodes and clusters (minimized cluster, or its expanded nodes) + this.clusters = [ ]; + this.supportedByTaxonomy = false; + this.supportedByPhylogeny = false; + // parent IDs will be set during reviver sweep of tree-view JSON + this.parentNodeID = null; + // display bounds (mine and my children's) will be set during drawNode + this.displayBounds = null; + // X/Y coords will be set during drawNode + this.x = 0; + this.y = 0; +}; +ArgusNode.prototype.getClusters = function() { + return argus.clusters[this.node_id] || [ ]; +}; +ArgusNode.prototype.isLocalLeafNode = function() { + return (typeof this.children === 'undefined'); +}; +ArgusNode.prototype.isActualLeafNode = function() { + return this.num_tips === 0; +}; +ArgusNode.prototype.isExtinct = function() { + if (typeof this.extinct === 'undefined') { + return false; // allow parsimony (omit property for non-extinct nodes) + } + return (this.extinct === true); +}; +ArgusNode.prototype.isVisibleLeafNode = function() { + return this.hasChildren === false || this.num_tips_in_view === 0; +}; +ArgusNode.prototype.updateDisplayBounds = function() { + // update my layout properties and store results (for faster access) + var topY = this.y - (argus.nodeHeight / 2), + firstChildY = this.y, + lastChildY = this.y, + bottomY = this.y + (argus.nodeHeight / 2), + middleY = this.y; + + if (this.displayList) { + var displayListCount = this.displayList.length; + if (displayListCount > 0) { + // this should override the minimal bounds above + topY = 1000000; // an implausibly high number + bottomY = 0; + for (var i = 0; i < displayListCount; i++) { + var testChild = this.displayList[i]; + topY = Math.min(topY, testChild.displayBounds.topY); + bottomY = Math.max(bottomY, testChild.displayBounds.bottomY); + if (i === 0) { + firstChildY = testChild.y; + } + if (i === displayListCount - 1) { + lastChildY = testChild.y; + } + } + middleY = (bottomY + topY) / 2; + } + } + this.displayBounds = { + topY: topY, + firstChildY: firstChildY, + lastChildY: lastChildY, + bottomY: bottomY, + middleY: middleY + }; + return this.displayBounds; +}; + +function ArgusCluster() { // constructor + this.nodes = [ ]; + // each cluster is either minimized (default) or expanded + this.expanded = false; + // parent ID will be set on creation + this.parentNodeID = null; + // display bounds (minimized cluster) will be set during drawNode + this.displayBounds = null; + // X/Y coords (minimized cluster) will be set during drawNode + this.x = 0; + this.y = 0; +}; +ArgusCluster.prototype.updateDisplayBounds = function() { + // update my layout properties and store results (for faster access) + this.displayBounds = { + topY: this.y - (argus.nodeHeight * 0.7), + bottomY: this.y + (argus.nodeHeight * 1.0) + }; + return this.displayBounds; +}; + +function loadConflictingTreeDetails(studyID, treeID, conflictDetailsPanelID) { + /* Fetch details (esp. names) about a conflicting tree; + * update the UI once we have the data. + */ + var studyURL = '/curator/study/view/{STUDY_ID}/'.replace('{STUDY_ID}', studyID); + var conflictURL = studyURL + '?tab=trees&tree={TREE_ID}&conflict=ott'.replace('{TREE_ID}', treeID); + // One AJAX fetch per tree + $.post( + singlePropertySearchForTrees_url, // JSON fetch URL + JSON.stringify({ // POSTed data + "property": "ot:studyId", + "value": studyID, + verbose: true + }), + function(data) { // JSONP callback + var $detailsPanel = $('#'+ conflictDetailsPanelID); + try { + var studyInfo = data.matched_studies[0]; + var treeInfo = $.grep(studyInfo.matched_trees, function(treeInfo) { + return (treeInfo['ot:treeId'] === treeID); + })[0]; + var treeName = treeInfo['@label'] || ('Untitled ('+ treeInfo['ot:treeId'] +')'); + console.warn(treeName); + detailsPanelHTML = 'Conflicting tree \''+ treeName +'\'
' + + 'Show this tree\'s conflicts in the study curation tool
' + + '
'+ studyInfo['ot:studyPublicationReference']
+                  + ' '+ studyInfo['ot:studyPublication'] +'
'; + //+ 'Show this study (all trees) in a new window
'; + $detailsPanel.html(detailsPanelHTML); + console.log( $detailsPanel.length +' panels updated.'); + // clobber the initial raw link, since we have somethign nicer + $detailsPanel.prev('a').remove(); + } catch(e) { + $detailsPanel.html('ERROR loading details for this conflicting tree!'); + } + } + ); + console.warn("ALL DONE?"); +} + +function getClientBoundingBox( elementSet ) { + // Takes a RaphaelJS element set, reckons its full bounding box in + // page/client coordinates. + var bbox = { + x: Number.MAX_VALUE, + y: Number.MAX_VALUE, + x2: Number.MIN_VALUE, + y2: Number.MIN_VALUE + }; + elementSet.forEach(function(e) { + var el = e[0]; + var rect = el.getBoundingClientRect(); + bbox.x = Math.min(bbox.x, rect.left); + bbox.x2 = Math.max(bbox.x2, rect.right); + bbox.y = Math.min(bbox.y, rect.top); + bbox.y2 = Math.max(bbox.y2, rect.bottom); + }); + bbox.width = bbox.x2 - bbox.x; + bbox.height = bbox.y2 - bbox.y; + return bbox; +} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/format.css b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/format.css new file mode 100644 index 000000000..b5c5de4bd --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/format.css @@ -0,0 +1,47 @@ +body { + font-family: Arial, Helvetica, sans-serif; + +} input { + display: inline; + +} form { + display: inline; + +} .results { + list-style: none; + padding: 0; + margin: 0; + +} .results ul { + list-style: none; + padding: 0 0 0 12px; + margin: 0; + margin: 0 0 1.5em 0; + +} .results ul li { + display: block; + padding: 2px 0 2px 0; + margin: 0; + +} .results ul li span { + display: inline-block; + position: relative; + width: 8em; + padding: 0 0 0 1em; + +} .results ul li span.matchname { + width: 10em; + +} .highlight { + background: #fcf4ff; + +} .label { + font-weight: bold; + font-size: 0.9em; + color: #999; + padding: 0em 0 0.5em 0; + +} #treesearch { + padding: 1em 0 0 0; + +} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/index.html b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/index.html new file mode 100644 index 000000000..55fbc796e --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/index.html @@ -0,0 +1,30 @@ + + +Node start point select form + + + + + + + +
+

+ Search for taxonomic names (separate names with commas):
+ +

+
+
+

+ Enter a tree string to perform TNRS name-matching on its tips:
+
+ +

+
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b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/loadtaxdata.js @@ -0,0 +1,138 @@ +/* +@licstart The following is the entire license notice for the JavaScript code in this page. + + Copyright (c) 2013, Cody Hinchliff + Copyright (c) 2013, Joseph W. Brown + Copyright (c) 2013, Jim Allman + Copyright (c) 2013, Mark Holder + + All rights reserved. + + Redistribution and use in source and binary forms, with or without + modification, are permitted provided that the following conditions are met: + + Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + + Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + + THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE + DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE + FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL + DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR + SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER + CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, + OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE + OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +@licend The above is the entire license notice for the JavaScript code in this page. +*/ + +// the location of the TNRS query service +url = doTNRSForNames_url; // passed from main HTML page template + +/* + * NOTE - This appears to be dead code, so I'm not adapting it to work with the autocompleteQuery method + */ + +function roundDecimal(value, precision) { + var t = Math.pow(10,precision); + var result = Math.round(value*t)/t; + return result; +} + +function setup() { + + // attempt to get queried name from url string + var searchStr = ""; + var treeStr = ""; + var domsource = ""; + if (location.search != "") { + var tokstr = location.search.substr(1).split("?"); + var toks = String(tokstr).split("&"); + for (var i=0; i"); + $("body").append(results); + + // for each queried name + for(var i = 0; i < respData.results.length; i++) { + + // get the name itself + var queriedName = respData.results[i].queried_name; + var nameResultIdString = "taxEntry" + i; + + // create a sublist to hold matches to this name + $(results).append("
  • results for '" + queriedName + "'
    • ") + var nameResult = $("
      "); + $(results).append(nameResult); + + // print all matches to the sublist + var matches = respData.results[i].matches; + for (var j = 0; j < matches.length; j++) { + var thisMatch = matches[j]; + + var thisMatchResult = $("
    • "); + + var matchForm = $("
      ").append("").append("").append(""); + + thisMatchResult.append(matchForm).append(""+thisMatch.matchedNodeName+"").append(""+thisMatch.parentName+"").append(""+thisMatch.nomenCode+"").append(""+roundDecimal(thisMatch.score,3)+""); + + $(nameResult).append(thisMatchResult); + + // highlight odd match rows + if (j % 2 == 0) + thisMatchResult.attr("class","highlight"); + } + } + + if (respData.results.length == 0) { + $(results).append("
    • No results found for: " + queriedName + "
      • ") + } + + }); +} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/nameresults.html b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/nameresults.html new file mode 100644 index 000000000..b20a9279d --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/nameresults.html @@ -0,0 +1,17 @@ + + +Node start point select form + + + + + + + + + + + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/raphael-min.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/raphael-min.js new file mode 100644 index 000000000..b907338b7 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/argus/raphael-min.js @@ -0,0 +1,12 @@ +// ┌────────────────────────────────────────────────────────────────────┐ \\ +// │ Raphaël 2.1.4 - JavaScript Vector Library │ \\ +// ├────────────────────────────────────────────────────────────────────┤ \\ +// │ Copyright © 2008-2012 Dmitry Baranovskiy 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b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-affix.js new file mode 100644 index 000000000..91c9ced13 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-affix.js @@ -0,0 +1,117 @@ +/* ========================================================== + * bootstrap-affix.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#affix + * ========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* AFFIX CLASS DEFINITION + * ====================== */ + + var Affix = function (element, options) { + this.options = $.extend({}, $.fn.affix.defaults, options) + this.$window = $(window) + .on('scroll.affix.data-api', $.proxy(this.checkPosition, this)) + .on('click.affix.data-api', $.proxy(function () { setTimeout($.proxy(this.checkPosition, this), 1) }, this)) + this.$element = $(element) + this.checkPosition() + } + + Affix.prototype.checkPosition = function () { + if (!this.$element.is(':visible')) return + + var scrollHeight = $(document).height() + , scrollTop = this.$window.scrollTop() + , position = this.$element.offset() + , offset = this.options.offset + , offsetBottom = offset.bottom + , offsetTop = offset.top + , reset = 'affix affix-top affix-bottom' + , affix + + if (typeof offset != 'object') offsetBottom = offsetTop = offset + if (typeof offsetTop == 'function') offsetTop = offset.top() + if (typeof offsetBottom == 'function') offsetBottom = offset.bottom() + + affix = this.unpin != null && (scrollTop + this.unpin <= position.top) ? + false : offsetBottom != null && (position.top + this.$element.height() >= scrollHeight - offsetBottom) ? + 'bottom' : offsetTop != null && scrollTop <= offsetTop ? + 'top' : false + + if (this.affixed === affix) return + + this.affixed = affix + this.unpin = affix == 'bottom' ? position.top - scrollTop : null + + this.$element.removeClass(reset).addClass('affix' + (affix ? '-' + affix : '')) + } + + + /* AFFIX PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.affix + + $.fn.affix = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('affix') + , options = typeof option == 'object' && option + if (!data) $this.data('affix', (data = new Affix(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.affix.Constructor = Affix + + $.fn.affix.defaults = { + offset: 0 + } + + + /* AFFIX NO CONFLICT + * ================= */ + + $.fn.affix.noConflict = function () { + $.fn.affix = old + return this + } + + + /* AFFIX DATA-API + * ============== */ + + $(window).on('load', function () { + $('[data-spy="affix"]').each(function () { + var $spy = $(this) + , data = $spy.data() + + data.offset = data.offset || {} + + data.offsetBottom && (data.offset.bottom = data.offsetBottom) + data.offsetTop && (data.offset.top = data.offsetTop) + + $spy.affix(data) + }) + }) + + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-alert.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-alert.js new file mode 100644 index 000000000..0cefe5fc5 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-alert.js @@ -0,0 +1,99 @@ +/* ========================================================== + * bootstrap-alert.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#alerts + * ========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* ALERT CLASS DEFINITION + * ====================== */ + + var dismiss = '[data-dismiss="alert"]' + , Alert = function (el) { + $(el).on('click', dismiss, this.close) + } + + Alert.prototype.close = function (e) { + var $this = $(this) + , selector = $this.attr('data-target') + , $parent + + if (!selector) { + selector = $this.attr('href') + selector = selector && selector.replace(/.*(?=#[^\s]*$)/, '') //strip for ie7 + } + + $parent = $(selector) + + e && e.preventDefault() + + $parent.length || ($parent = $this.hasClass('alert') ? $this : $this.parent()) + + $parent.trigger(e = $.Event('close')) + + if (e.isDefaultPrevented()) return + + $parent.removeClass('in') + + function removeElement() { + $parent + .trigger('closed') + .remove() + } + + $.support.transition && $parent.hasClass('fade') ? + $parent.on($.support.transition.end, removeElement) : + removeElement() + } + + + /* ALERT PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.alert + + $.fn.alert = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('alert') + if (!data) $this.data('alert', (data = new Alert(this))) + if (typeof option == 'string') data[option].call($this) + }) + } + + $.fn.alert.Constructor = Alert + + + /* ALERT NO CONFLICT + * ================= */ + + $.fn.alert.noConflict = function () { + $.fn.alert = old + return this + } + + + /* ALERT DATA-API + * ============== */ + + $(document).on('click.alert.data-api', dismiss, Alert.prototype.close) + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-button.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-button.js new file mode 100644 index 000000000..ce4599164 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-button.js @@ -0,0 +1,105 @@ +/* ============================================================ + * bootstrap-button.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#buttons + * ============================================================ + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* BUTTON PUBLIC CLASS DEFINITION + * ============================== */ + + var Button = function (element, options) { + this.$element = $(element) + this.options = $.extend({}, $.fn.button.defaults, options) + } + + Button.prototype.setState = function (state) { + var d = 'disabled' + , $el = this.$element + , data = $el.data() + , val = $el.is('input') ? 'val' : 'html' + + state = state + 'Text' + data.resetText || $el.data('resetText', $el[val]()) + + $el[val](data[state] || this.options[state]) + + // push to event loop to allow forms to submit + setTimeout(function () { + state == 'loadingText' ? + $el.addClass(d).attr(d, d) : + $el.removeClass(d).removeAttr(d) + }, 0) + } + + Button.prototype.toggle = function () { + var $parent = this.$element.closest('[data-toggle="buttons-radio"]') + + $parent && $parent + .find('.active') + .removeClass('active') + + this.$element.toggleClass('active') + } + + + /* BUTTON PLUGIN DEFINITION + * ======================== */ + + var old = $.fn.button + + $.fn.button = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('button') + , options = typeof option == 'object' && option + if (!data) $this.data('button', (data = new Button(this, options))) + if (option == 'toggle') data.toggle() + else if (option) data.setState(option) + }) + } + + $.fn.button.defaults = { + loadingText: 'loading...' + } + + $.fn.button.Constructor = Button + + + /* BUTTON NO CONFLICT + * ================== */ + + $.fn.button.noConflict = function () { + $.fn.button = old + return this + } + + + /* BUTTON DATA-API + * =============== */ + + $(document).on('click.button.data-api', '[data-toggle^=button]', function (e) { + var $btn = $(e.target) + if (!$btn.hasClass('btn')) $btn = $btn.closest('.btn') + $btn.button('toggle') + }) + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-carousel.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-carousel.js new file mode 100644 index 000000000..476494ad6 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-carousel.js @@ -0,0 +1,207 @@ +/* ========================================================== + * bootstrap-carousel.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#carousel + * ========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* CAROUSEL CLASS DEFINITION + * ========================= */ + + var Carousel = function (element, options) { + this.$element = $(element) + this.$indicators = this.$element.find('.carousel-indicators') + this.options = options + this.options.pause == 'hover' && this.$element + .on('mouseenter', $.proxy(this.pause, this)) + .on('mouseleave', $.proxy(this.cycle, this)) + } + + Carousel.prototype = { + + cycle: function (e) { + if (!e) this.paused = false + if (this.interval) clearInterval(this.interval); + this.options.interval + && !this.paused + && (this.interval = setInterval($.proxy(this.next, this), this.options.interval)) + return this + } + + , getActiveIndex: function () { + this.$active = this.$element.find('.item.active') + this.$items = this.$active.parent().children() + return this.$items.index(this.$active) + } + + , to: function (pos) { + var activeIndex = this.getActiveIndex() + , that = this + + if (pos > (this.$items.length - 1) || pos < 0) return + + if (this.sliding) { + return this.$element.one('slid', function () { + that.to(pos) + }) + } + + if (activeIndex == pos) { + return this.pause().cycle() + } + + return this.slide(pos > activeIndex ? 'next' : 'prev', $(this.$items[pos])) + } + + , pause: function (e) { + if (!e) this.paused = true + if (this.$element.find('.next, .prev').length && $.support.transition.end) { + this.$element.trigger($.support.transition.end) + this.cycle(true) + } + clearInterval(this.interval) + this.interval = null + return this + } + + , next: function () { + if (this.sliding) return + return this.slide('next') + } + + , prev: function () { + if (this.sliding) return + return this.slide('prev') + } + + , slide: function (type, next) { + var $active = this.$element.find('.item.active') + , $next = next || $active[type]() + , isCycling = this.interval + , direction = type == 'next' ? 'left' : 'right' + , fallback = type == 'next' ? 'first' : 'last' + , that = this + , e + + this.sliding = true + + isCycling && this.pause() + + $next = $next.length ? $next : this.$element.find('.item')[fallback]() + + e = $.Event('slide', { + relatedTarget: $next[0] + , direction: direction + }) + + if ($next.hasClass('active')) return + + if (this.$indicators.length) { + this.$indicators.find('.active').removeClass('active') + this.$element.one('slid', function () { + var $nextIndicator = $(that.$indicators.children()[that.getActiveIndex()]) + $nextIndicator && $nextIndicator.addClass('active') + }) + } + + if ($.support.transition && this.$element.hasClass('slide')) { + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + $next.addClass(type) + $next[0].offsetWidth // force reflow + $active.addClass(direction) + $next.addClass(direction) + this.$element.one($.support.transition.end, function () { + $next.removeClass([type, direction].join(' ')).addClass('active') + $active.removeClass(['active', direction].join(' ')) + that.sliding = false + setTimeout(function () { that.$element.trigger('slid') }, 0) + }) + } else { + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + $active.removeClass('active') + $next.addClass('active') + this.sliding = false + this.$element.trigger('slid') + } + + isCycling && this.cycle() + + return this + } + + } + + + /* CAROUSEL PLUGIN DEFINITION + * ========================== */ + + var old = $.fn.carousel + + $.fn.carousel = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('carousel') + , options = $.extend({}, $.fn.carousel.defaults, typeof option == 'object' && option) + , action = typeof option == 'string' ? option : options.slide + if (!data) $this.data('carousel', (data = new Carousel(this, options))) + if (typeof option == 'number') data.to(option) + else if (action) data[action]() + else if (options.interval) data.pause().cycle() + }) + } + + $.fn.carousel.defaults = { + interval: 5000 + , pause: 'hover' + } + + $.fn.carousel.Constructor = Carousel + + + /* CAROUSEL NO CONFLICT + * ==================== */ + + $.fn.carousel.noConflict = function () { + $.fn.carousel = old + return this + } + + /* CAROUSEL DATA-API + * ================= */ + + $(document).on('click.carousel.data-api', '[data-slide], [data-slide-to]', function (e) { + var $this = $(this), href + , $target = $($this.attr('data-target') || (href = $this.attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '')) //strip for ie7 + , options = $.extend({}, $target.data(), $this.data()) + , slideIndex + + $target.carousel(options) + + if (slideIndex = $this.attr('data-slide-to')) { + $target.data('carousel').pause().to(slideIndex).cycle() + } + + e.preventDefault() + }) + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-collapse.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-collapse.js new file mode 100644 index 000000000..74a73a890 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-collapse.js @@ -0,0 +1,167 @@ +/* ============================================================= + * bootstrap-collapse.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#collapse + * ============================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* COLLAPSE PUBLIC CLASS DEFINITION + * ================================ */ + + var Collapse = function (element, options) { + this.$element = $(element) + this.options = $.extend({}, $.fn.collapse.defaults, options) + + if (this.options.parent) { + this.$parent = $(this.options.parent) + } + + this.options.toggle && this.toggle() + } + + Collapse.prototype = { + + constructor: Collapse + + , dimension: function () { + var hasWidth = this.$element.hasClass('width') + return hasWidth ? 'width' : 'height' + } + + , show: function () { + var dimension + , scroll + , actives + , hasData + + if (this.transitioning || this.$element.hasClass('in')) return + + dimension = this.dimension() + scroll = $.camelCase(['scroll', dimension].join('-')) + actives = this.$parent && this.$parent.find('> .accordion-group > .in') + + if (actives && actives.length) { + hasData = actives.data('collapse') + if (hasData && hasData.transitioning) return + actives.collapse('hide') + hasData || actives.data('collapse', null) + } + + this.$element[dimension](0) + this.transition('addClass', $.Event('show'), 'shown') + $.support.transition && this.$element[dimension](this.$element[0][scroll]) + } + + , hide: function () { + var dimension + if (this.transitioning || !this.$element.hasClass('in')) return + dimension = this.dimension() + this.reset(this.$element[dimension]()) + this.transition('removeClass', $.Event('hide'), 'hidden') + this.$element[dimension](0) + } + + , reset: function (size) { + var dimension = this.dimension() + + this.$element + .removeClass('collapse') + [dimension](size || 'auto') + [0].offsetWidth + + this.$element[size !== null ? 'addClass' : 'removeClass']('collapse') + + return this + } + + , transition: function (method, startEvent, completeEvent) { + var that = this + , complete = function () { + if (startEvent.type == 'show') that.reset() + that.transitioning = 0 + that.$element.trigger(completeEvent) + } + + this.$element.trigger(startEvent) + + if (startEvent.isDefaultPrevented()) return + + this.transitioning = 1 + + this.$element[method]('in') + + $.support.transition && this.$element.hasClass('collapse') ? + this.$element.one($.support.transition.end, complete) : + complete() + } + + , toggle: function () { + this[this.$element.hasClass('in') ? 'hide' : 'show']() + } + + } + + + /* COLLAPSE PLUGIN DEFINITION + * ========================== */ + + var old = $.fn.collapse + + $.fn.collapse = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('collapse') + , options = $.extend({}, $.fn.collapse.defaults, $this.data(), typeof option == 'object' && option) + if (!data) $this.data('collapse', (data = new Collapse(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.collapse.defaults = { + toggle: true + } + + $.fn.collapse.Constructor = Collapse + + + /* COLLAPSE NO CONFLICT + * ==================== */ + + $.fn.collapse.noConflict = function () { + $.fn.collapse = old + return this + } + + + /* COLLAPSE DATA-API + * ================= */ + + $(document).on('click.collapse.data-api', '[data-toggle=collapse]', function (e) { + var $this = $(this), href + , target = $this.attr('data-target') + || e.preventDefault() + || (href = $this.attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '') //strip for ie7 + , option = $(target).data('collapse') ? 'toggle' : $this.data() + $this[$(target).hasClass('in') ? 'addClass' : 'removeClass']('collapsed') + $(target).collapse(option) + }) + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-dropdown.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-dropdown.js new file mode 100644 index 000000000..cf8cb524d --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-dropdown.js @@ -0,0 +1,176 @@ +/* ============================================================ + * bootstrap-dropdown.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#dropdowns + * ============================================================ + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ +/* + * Contains minor modifications by Jim Allman (see 'jimA' below) + */ + +!function ($) { + + "use strict"; // jshint ;_; + + + /* DROPDOWN CLASS DEFINITION + * ========================= */ + + var toggle = '[data-toggle=dropdown]' + , Dropdown = function (element) { + var $el = $(element).on('click.dropdown.data-api', this.toggle) + $('html').on('click.dropdown.data-api', function () { + $el.parent().removeClass('open') + }) + } + + Dropdown.prototype = { + + constructor: Dropdown + + , toggle: function (e) { + var $this = $(this) + , $parent + , isActive + + if ($this.is('.disabled, :disabled')) return + + $parent = getParent($this) + + isActive = $parent.hasClass('open') + + clearMenus() + + if (!isActive) { + if ('ontouchstart' in document.documentElement) { + // if mobile we we use a backdrop because click events don't delegate + $('
      ').insertBefore($(this)).on('click', clearMenus) + } + $parent.toggleClass('open') + } + + $this.focus() + + return false + } + + , keydown: function (e) { + var $this + , $items + , $active + , $parent + , isActive + , index + + if (!/(38|40|27)/.test(e.keyCode)) return + + $this = $(this) + + e.preventDefault() + e.stopPropagation() + + if ($this.is('.disabled, :disabled')) return + + $parent = getParent($this) + + isActive = $parent.hasClass('open') + + if (!isActive || (isActive && e.keyCode == 27)) { + if (e.which == 27) $parent.find(toggle).focus() + return $this.click() + } + + $items = $('[role=menu] li:not(.divider):visible a', $parent) + + if (!$items.length) return + + index = $items.index($items.filter(':focus')) + + if (e.keyCode == 38 && index > 0) index-- // up + if (e.keyCode == 40 && index < $items.length - 1) index++ // down + if (!~index) index = 0 + + $items + .eq(index) + .focus() + } + + } + + function clearMenus() { + $('.dropdown-backdrop').remove() + $(toggle).each(function () { + getParent($(this)).removeClass('open') + }) + } + + function getParent($this) { + var selector = $this.attr('data-target') + , $parent + + if (!selector) { + selector = $this.attr('href') + selector = selector && /#/.test(selector) && selector.replace(/.*(?=#[^\s]*$)/, '') //strip for ie7 + } + + // jimA: Add hack to suppress warnings in Firefox (see https://github.com/twitter/bootstrap/issues/5566) + if(selector == '#') { + selector = '#-'; + } + + $parent = selector && $(selector) + + if (!$parent || !$parent.length) $parent = $this.parent() + + return $parent + } + + + /* DROPDOWN PLUGIN DEFINITION + * ========================== */ + + var old = $.fn.dropdown + + $.fn.dropdown = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('dropdown') + if (!data) $this.data('dropdown', (data = new Dropdown(this))) + if (typeof option == 'string') data[option].call($this) + }) + } + + $.fn.dropdown.Constructor = Dropdown + + + /* DROPDOWN NO CONFLICT + * ==================== */ + + $.fn.dropdown.noConflict = function () { + $.fn.dropdown = old + return this + } + + + /* APPLY TO STANDARD DROPDOWN ELEMENTS + * =================================== */ + + $(document) + .on('click.dropdown.data-api', clearMenus) + .on('click.dropdown.data-api', '.dropdown form', function (e) { e.stopPropagation() }) + .on('click.dropdown.data-api' , toggle, Dropdown.prototype.toggle) + .on('keydown.dropdown.data-api', toggle + ', [role=menu]' , Dropdown.prototype.keydown) + +}(window.jQuery); diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-modal.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-modal.js new file mode 100644 index 000000000..c3648d8b7 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-modal.js @@ -0,0 +1,247 @@ +/* ========================================================= + * bootstrap-modal.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#modals + * ========================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================= */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* MODAL CLASS DEFINITION + * ====================== */ + + var Modal = function (element, options) { + this.options = options + this.$element = $(element) + .delegate('[data-dismiss="modal"]', 'click.dismiss.modal', $.proxy(this.hide, this)) + this.options.remote && this.$element.find('.modal-body').load(this.options.remote) + } + + Modal.prototype = { + + constructor: Modal + + , toggle: function () { + return this[!this.isShown ? 'show' : 'hide']() + } + + , show: function () { + var that = this + , e = $.Event('show') + + this.$element.trigger(e) + + if (this.isShown || e.isDefaultPrevented()) return + + this.isShown = true + + this.escape() + + this.backdrop(function () { + var transition = $.support.transition && that.$element.hasClass('fade') + + if (!that.$element.parent().length) { + that.$element.appendTo(document.body) //don't move modals dom position + } + + that.$element.show() + + if (transition) { + that.$element[0].offsetWidth // force reflow + } + + that.$element + .addClass('in') + .attr('aria-hidden', false) + + that.enforceFocus() + + transition ? + that.$element.one($.support.transition.end, function () { that.$element.focus().trigger('shown') }) : + that.$element.focus().trigger('shown') + + }) + } + + , hide: function (e) { + e && e.preventDefault() + + var that = this + + e = $.Event('hide') + + this.$element.trigger(e) + + if (!this.isShown || e.isDefaultPrevented()) return + + this.isShown = false + + this.escape() + + $(document).off('focusin.modal') + + this.$element + .removeClass('in') + .attr('aria-hidden', true) + + $.support.transition && this.$element.hasClass('fade') ? + this.hideWithTransition() : + this.hideModal() + } + + , enforceFocus: function () { + var that = this + $(document).on('focusin.modal', function (e) { + if (that.$element[0] !== e.target && !that.$element.has(e.target).length) { + that.$element.focus() + } + }) + } + + , escape: function () { + var that = this + if (this.isShown && this.options.keyboard) { + this.$element.on('keyup.dismiss.modal', function ( e ) { + e.which == 27 && that.hide() + }) + } else if (!this.isShown) { + this.$element.off('keyup.dismiss.modal') + } + } + + , hideWithTransition: function () { + var that = this + , timeout = setTimeout(function () { + that.$element.off($.support.transition.end) + that.hideModal() + }, 500) + + this.$element.one($.support.transition.end, function () { + clearTimeout(timeout) + that.hideModal() + }) + } + + , hideModal: function () { + var that = this + this.$element.hide() + this.backdrop(function () { + that.removeBackdrop() + that.$element.trigger('hidden') + }) + } + + , removeBackdrop: function () { + this.$backdrop && this.$backdrop.remove() + this.$backdrop = null + } + + , backdrop: function (callback) { + var that = this + , animate = this.$element.hasClass('fade') ? 'fade' : '' + + if (this.isShown && this.options.backdrop) { + var doAnimate = $.support.transition && animate + + this.$backdrop = $('
      ') + .appendTo(document.body) + + this.$backdrop.click( + this.options.backdrop == 'static' ? + $.proxy(this.$element[0].focus, this.$element[0]) + : $.proxy(this.hide, this) + ) + + if (doAnimate) this.$backdrop[0].offsetWidth // force reflow + + this.$backdrop.addClass('in') + + if (!callback) return + + doAnimate ? + this.$backdrop.one($.support.transition.end, callback) : + callback() + + } else if (!this.isShown && this.$backdrop) { + this.$backdrop.removeClass('in') + + $.support.transition && this.$element.hasClass('fade')? + this.$backdrop.one($.support.transition.end, callback) : + callback() + + } else if (callback) { + callback() + } + } + } + + + /* MODAL PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.modal + + $.fn.modal = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('modal') + , options = $.extend({}, $.fn.modal.defaults, $this.data(), typeof option == 'object' && option) + if (!data) $this.data('modal', (data = new Modal(this, options))) + if (typeof option == 'string') data[option]() + else if (options.show) data.show() + }) + } + + $.fn.modal.defaults = { + backdrop: true + , keyboard: true + , show: true + } + + $.fn.modal.Constructor = Modal + + + /* MODAL NO CONFLICT + * ================= */ + + $.fn.modal.noConflict = function () { + $.fn.modal = old + return this + } + + + /* MODAL DATA-API + * ============== */ + + $(document).on('click.modal.data-api', '[data-toggle="modal"]', function (e) { + var $this = $(this) + , href = $this.attr('href') + , $target = $($this.attr('data-target') || (href && href.replace(/.*(?=#[^\s]+$)/, ''))) //strip for ie7 + , option = $target.data('modal') ? 'toggle' : $.extend({ remote:!/#/.test(href) && href }, $target.data(), $this.data()) + + e.preventDefault() + + $target + .modal(option) + .one('hide', function () { + $this.focus() + }) + }) + +}(window.jQuery); diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-popover.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-popover.js new file mode 100644 index 000000000..e6a23d210 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-popover.js @@ -0,0 +1,114 @@ +/* =========================================================== + * bootstrap-popover.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#popovers + * =========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * =========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* POPOVER PUBLIC CLASS DEFINITION + * =============================== */ + + var Popover = function (element, options) { + this.init('popover', element, options) + } + + + /* NOTE: POPOVER EXTENDS BOOTSTRAP-TOOLTIP.js + ========================================== */ + + Popover.prototype = $.extend({}, $.fn.tooltip.Constructor.prototype, { + + constructor: Popover + + , setContent: function () { + var $tip = this.tip() + , title = this.getTitle() + , content = this.getContent() + + $tip.find('.popover-title')[this.options.html ? 'html' : 'text'](title) + $tip.find('.popover-content')[this.options.html ? 'html' : 'text'](content) + + $tip.removeClass('fade top bottom left right in') + } + + , hasContent: function () { + return this.getTitle() || this.getContent() + } + + , getContent: function () { + var content + , $e = this.$element + , o = this.options + + content = (typeof o.content == 'function' ? o.content.call($e[0]) : o.content) + || $e.attr('data-content') + + return content + } + + , tip: function () { + if (!this.$tip) { + this.$tip = $(this.options.template) + } + return this.$tip + } + + , destroy: function () { + this.hide().$element.off('.' + this.type).removeData(this.type) + } + + }) + + + /* POPOVER PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.popover + + $.fn.popover = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('popover') + , options = typeof option == 'object' && option + if (!data) $this.data('popover', (data = new Popover(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.popover.Constructor = Popover + + $.fn.popover.defaults = $.extend({} , $.fn.tooltip.defaults, { + placement: 'right' + , trigger: 'click' + , content: '' + , template: '

      ' + }) + + + /* POPOVER NO CONFLICT + * =================== */ + + $.fn.popover.noConflict = function () { + $.fn.popover = old + return this + } + +}(window.jQuery); diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-scrollspy.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-scrollspy.js new file mode 100644 index 000000000..7dd60c426 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-scrollspy.js @@ -0,0 +1,162 @@ +/* ============================================================= + * bootstrap-scrollspy.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#scrollspy + * ============================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* SCROLLSPY CLASS DEFINITION + * ========================== */ + + function ScrollSpy(element, options) { + var process = $.proxy(this.process, this) + , $element = $(element).is('body') ? $(window) : $(element) + , href + this.options = $.extend({}, $.fn.scrollspy.defaults, options) + this.$scrollElement = $element.on('scroll.scroll-spy.data-api', process) + this.selector = (this.options.target + || ((href = $(element).attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '')) //strip for ie7 + || '') + ' .nav li > a' + this.$body = $('body') + this.refresh() + this.process() + } + + ScrollSpy.prototype = { + + constructor: ScrollSpy + + , refresh: function () { + var self = this + , $targets + + this.offsets = $([]) + this.targets = $([]) + + $targets = this.$body + .find(this.selector) + .map(function () { + var $el = $(this) + , href = $el.data('target') || $el.attr('href') + , $href = /^#\w/.test(href) && $(href) + return ( $href + && $href.length + && [[ $href.position().top + (!$.isWindow(self.$scrollElement.get(0)) && self.$scrollElement.scrollTop()), href ]] ) || null + }) + .sort(function (a, b) { return a[0] - b[0] }) + .each(function () { + self.offsets.push(this[0]) + self.targets.push(this[1]) + }) + } + + , process: function () { + var scrollTop = this.$scrollElement.scrollTop() + this.options.offset + , scrollHeight = this.$scrollElement[0].scrollHeight || this.$body[0].scrollHeight + , maxScroll = scrollHeight - this.$scrollElement.height() + , offsets = this.offsets + , targets = this.targets + , activeTarget = this.activeTarget + , i + + if (scrollTop >= maxScroll) { + return activeTarget != (i = targets.last()[0]) + && this.activate ( i ) + } + + for (i = offsets.length; i--;) { + activeTarget != targets[i] + && scrollTop >= offsets[i] + && (!offsets[i + 1] || scrollTop <= offsets[i + 1]) + && this.activate( targets[i] ) + } + } + + , activate: function (target) { + var active + , selector + + this.activeTarget = target + + $(this.selector) + .parent('.active') + .removeClass('active') + + selector = this.selector + + '[data-target="' + target + '"],' + + this.selector + '[href="' + target + '"]' + + active = $(selector) + .parent('li') + .addClass('active') + + if (active.parent('.dropdown-menu').length) { + active = active.closest('li.dropdown').addClass('active') + } + + active.trigger('activate') + } + + } + + + /* SCROLLSPY PLUGIN DEFINITION + * =========================== */ + + var old = $.fn.scrollspy + + $.fn.scrollspy = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('scrollspy') + , options = typeof option == 'object' && option + if (!data) $this.data('scrollspy', (data = new ScrollSpy(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.scrollspy.Constructor = ScrollSpy + + $.fn.scrollspy.defaults = { + offset: 10 + } + + + /* SCROLLSPY NO CONFLICT + * ===================== */ + + $.fn.scrollspy.noConflict = function () { + $.fn.scrollspy = old + return this + } + + + /* SCROLLSPY DATA-API + * ================== */ + + $(window).on('load', function () { + $('[data-spy="scroll"]').each(function () { + var $spy = $(this) + $spy.scrollspy($spy.data()) + }) + }) + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-tab.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-tab.js new file mode 100644 index 000000000..a5161515a --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-tab.js @@ -0,0 +1,144 @@ +/* ======================================================== + * bootstrap-tab.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#tabs + * ======================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ======================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* TAB CLASS DEFINITION + * ==================== */ + + var Tab = function (element) { + this.element = $(element) + } + + Tab.prototype = { + + constructor: Tab + + , show: function () { + var $this = this.element + , $ul = $this.closest('ul:not(.dropdown-menu)') + , selector = $this.attr('data-target') + , previous + , $target + , e + + if (!selector) { + selector = $this.attr('href') + selector = selector && selector.replace(/.*(?=#[^\s]*$)/, '') //strip for ie7 + } + + if ( $this.parent('li').hasClass('active') ) return + + previous = $ul.find('.active:last a')[0] + + e = $.Event('show', { + relatedTarget: previous + }) + + $this.trigger(e) + + if (e.isDefaultPrevented()) return + + $target = $(selector) + + this.activate($this.parent('li'), $ul) + this.activate($target, $target.parent(), function () { + $this.trigger({ + type: 'shown' + , relatedTarget: previous + }) + }) + } + + , activate: function ( element, container, callback) { + var $active = container.find('> .active') + , transition = callback + && $.support.transition + && $active.hasClass('fade') + + function next() { + $active + .removeClass('active') + .find('> .dropdown-menu > .active') + .removeClass('active') + + element.addClass('active') + + if (transition) { + element[0].offsetWidth // reflow for transition + element.addClass('in') + } else { + element.removeClass('fade') + } + + if ( element.parent('.dropdown-menu') ) { + element.closest('li.dropdown').addClass('active') + } + + callback && callback() + } + + transition ? + $active.one($.support.transition.end, next) : + next() + + $active.removeClass('in') + } + } + + + /* TAB PLUGIN DEFINITION + * ===================== */ + + var old = $.fn.tab + + $.fn.tab = function ( option ) { + return this.each(function () { + var $this = $(this) + , data = $this.data('tab') + if (!data) $this.data('tab', (data = new Tab(this))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.tab.Constructor = Tab + + + /* TAB NO CONFLICT + * =============== */ + + $.fn.tab.noConflict = function () { + $.fn.tab = old + return this + } + + + /* TAB DATA-API + * ============ */ + + $(document).on('click.tab.data-api', '[data-toggle="tab"], [data-toggle="pill"]', function (e) { + e.preventDefault() + $(this).tab('show') + }) + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-tooltip.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-tooltip.js new file mode 100644 index 000000000..a3bbd580b --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-tooltip.js @@ -0,0 +1,361 @@ +/* =========================================================== + * bootstrap-tooltip.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#tooltips + * Inspired by the original jQuery.tipsy by Jason Frame + * =========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* TOOLTIP PUBLIC CLASS DEFINITION + * =============================== */ + + var Tooltip = function (element, options) { + this.init('tooltip', element, options) + } + + Tooltip.prototype = { + + constructor: Tooltip + + , init: function (type, element, options) { + var eventIn + , eventOut + , triggers + , trigger + , i + + this.type = type + this.$element = $(element) + this.options = this.getOptions(options) + this.enabled = true + + triggers = this.options.trigger.split(' ') + + for (i = triggers.length; i--;) { + trigger = triggers[i] + if (trigger == 'click') { + this.$element.on('click.' + this.type, this.options.selector, $.proxy(this.toggle, this)) + } else if (trigger != 'manual') { + eventIn = trigger == 'hover' ? 'mouseenter' : 'focus' + eventOut = trigger == 'hover' ? 'mouseleave' : 'blur' + this.$element.on(eventIn + '.' + this.type, this.options.selector, $.proxy(this.enter, this)) + this.$element.on(eventOut + '.' + this.type, this.options.selector, $.proxy(this.leave, this)) + } + } + + this.options.selector ? + (this._options = $.extend({}, this.options, { trigger: 'manual', selector: '' })) : + this.fixTitle() + } + + , getOptions: function (options) { + options = $.extend({}, $.fn[this.type].defaults, this.$element.data(), options) + + if (options.delay && typeof options.delay == 'number') { + options.delay = { + show: options.delay + , hide: options.delay + } + } + + return options + } + + , enter: function (e) { + var defaults = $.fn[this.type].defaults + , options = {} + , self + + this._options && $.each(this._options, function (key, value) { + if (defaults[key] != value) options[key] = value + }, this) + + self = $(e.currentTarget)[this.type](options).data(this.type) + + if (!self.options.delay || !self.options.delay.show) return self.show() + + clearTimeout(this.timeout) + self.hoverState = 'in' + this.timeout = setTimeout(function() { + if (self.hoverState == 'in') self.show() + }, self.options.delay.show) + } + + , leave: function (e) { + var self = $(e.currentTarget)[this.type](this._options).data(this.type) + + if (this.timeout) clearTimeout(this.timeout) + if (!self.options.delay || !self.options.delay.hide) return self.hide() + + self.hoverState = 'out' + this.timeout = setTimeout(function() { + if (self.hoverState == 'out') self.hide() + }, self.options.delay.hide) + } + + , show: function () { + var $tip + , pos + , actualWidth + , actualHeight + , placement + , tp + , e = $.Event('show') + + if (this.hasContent() && this.enabled) { + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + $tip = this.tip() + this.setContent() + + if (this.options.animation) { + $tip.addClass('fade') + } + + placement = typeof this.options.placement == 'function' ? + this.options.placement.call(this, $tip[0], this.$element[0]) : + this.options.placement + + $tip + .detach() + .css({ top: 0, left: 0, display: 'block' }) + + this.options.container ? $tip.appendTo(this.options.container) : $tip.insertAfter(this.$element) + + pos = this.getPosition() + + actualWidth = $tip[0].offsetWidth + actualHeight = $tip[0].offsetHeight + + switch (placement) { + case 'bottom': + tp = {top: pos.top + pos.height, left: pos.left + pos.width / 2 - actualWidth / 2} + break + case 'top': + tp = {top: pos.top - actualHeight, left: pos.left + pos.width / 2 - actualWidth / 2} + break + case 'left': + tp = {top: pos.top + pos.height / 2 - actualHeight / 2, left: pos.left - actualWidth} + break + case 'right': + tp = {top: pos.top + pos.height / 2 - actualHeight / 2, left: pos.left + pos.width} + break + } + + this.applyPlacement(tp, placement) + this.$element.trigger('shown') + } + } + + , applyPlacement: function(offset, placement){ + var $tip = this.tip() + , width = $tip[0].offsetWidth + , height = $tip[0].offsetHeight + , actualWidth + , actualHeight + , delta + , replace + + $tip + .offset(offset) + .addClass(placement) + .addClass('in') + + actualWidth = $tip[0].offsetWidth + actualHeight = $tip[0].offsetHeight + + if (placement == 'top' && actualHeight != height) { + offset.top = offset.top + height - actualHeight + replace = true + } + + if (placement == 'bottom' || placement == 'top') { + delta = 0 + + if (offset.left < 0){ + delta = offset.left * -2 + offset.left = 0 + $tip.offset(offset) + actualWidth = $tip[0].offsetWidth + actualHeight = $tip[0].offsetHeight + } + + this.replaceArrow(delta - width + actualWidth, actualWidth, 'left') + } else { + this.replaceArrow(actualHeight - height, actualHeight, 'top') + } + + if (replace) $tip.offset(offset) + } + + , replaceArrow: function(delta, dimension, position){ + this + .arrow() + .css(position, delta ? (50 * (1 - delta / dimension) + "%") : '') + } + + , setContent: function () { + var $tip = this.tip() + , title = this.getTitle() + + $tip.find('.tooltip-inner')[this.options.html ? 'html' : 'text'](title) + $tip.removeClass('fade in top bottom left right') + } + + , hide: function () { + var that = this + , $tip = this.tip() + , e = $.Event('hide') + + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + + $tip.removeClass('in') + + function removeWithAnimation() { + var timeout = setTimeout(function () { + $tip.off($.support.transition.end).detach() + }, 500) + + $tip.one($.support.transition.end, function () { + clearTimeout(timeout) + $tip.detach() + }) + } + + $.support.transition && this.$tip.hasClass('fade') ? + removeWithAnimation() : + $tip.detach() + + this.$element.trigger('hidden') + + return this + } + + , fixTitle: function () { + var $e = this.$element + if ($e.attr('title') || typeof($e.attr('data-original-title')) != 'string') { + $e.attr('data-original-title', $e.attr('title') || '').attr('title', '') + } + } + + , hasContent: function () { + return this.getTitle() + } + + , getPosition: function () { + var el = this.$element[0] + return $.extend({}, (typeof el.getBoundingClientRect == 'function') ? el.getBoundingClientRect() : { + width: el.offsetWidth + , height: el.offsetHeight + }, this.$element.offset()) + } + + , getTitle: function () { + var title + , $e = this.$element + , o = this.options + + title = $e.attr('data-original-title') + || (typeof o.title == 'function' ? o.title.call($e[0]) : o.title) + + return title + } + + , tip: function () { + return this.$tip = this.$tip || $(this.options.template) + } + + , arrow: function(){ + return this.$arrow = this.$arrow || this.tip().find(".tooltip-arrow") + } + + , validate: function () { + if (!this.$element[0].parentNode) { + this.hide() + this.$element = null + this.options = null + } + } + + , enable: function () { + this.enabled = true + } + + , disable: function () { + this.enabled = false + } + + , toggleEnabled: function () { + this.enabled = !this.enabled + } + + , toggle: function (e) { + var self = e ? $(e.currentTarget)[this.type](this._options).data(this.type) : this + self.tip().hasClass('in') ? self.hide() : self.show() + } + + , destroy: function () { + this.hide().$element.off('.' + this.type).removeData(this.type) + } + + } + + + /* TOOLTIP PLUGIN DEFINITION + * ========================= */ + + var old = $.fn.tooltip + + $.fn.tooltip = function ( option ) { + return this.each(function () { + var $this = $(this) + , data = $this.data('tooltip') + , options = typeof option == 'object' && option + if (!data) $this.data('tooltip', (data = new Tooltip(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.tooltip.Constructor = Tooltip + + $.fn.tooltip.defaults = { + animation: true + , placement: 'top' + , selector: false + , template: '
      ' + , trigger: 'hover focus' + , title: '' + , delay: 0 + , html: false + , container: false + } + + + /* TOOLTIP NO CONFLICT + * =================== */ + + $.fn.tooltip.noConflict = function () { + $.fn.tooltip = old + return this + } + +}(window.jQuery); diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-transition.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-transition.js new file mode 100644 index 000000000..e12cf6e5a --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-transition.js @@ -0,0 +1,60 @@ +/* =================================================== + * bootstrap-transition.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#transitions + * =================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* CSS TRANSITION SUPPORT (http://www.modernizr.com/) + * ======================================================= */ + + $(function () { + + $.support.transition = (function () { + + var transitionEnd = (function () { + + var el = document.createElement('bootstrap') + , transEndEventNames = { + 'WebkitTransition' : 'webkitTransitionEnd' + , 'MozTransition' : 'transitionend' + , 'OTransition' : 'oTransitionEnd otransitionend' + , 'transition' : 'transitionend' + } + , name + + for (name in transEndEventNames){ + if (el.style[name] !== undefined) { + return transEndEventNames[name] + } + } + + }()) + + return transitionEnd && { + end: transitionEnd + } + + })() + + }) + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-typeahead.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-typeahead.js new file mode 100644 index 000000000..abc48d505 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap-typeahead.js @@ -0,0 +1,335 @@ +/* ============================================================= + * bootstrap-typeahead.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#typeahead + * ============================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ + + +!function($){ + + "use strict"; // jshint ;_; + + + /* TYPEAHEAD PUBLIC CLASS DEFINITION + * ================================= */ + + var Typeahead = function (element, options) { + this.$element = $(element) + this.options = $.extend({}, $.fn.typeahead.defaults, options) + this.matcher = this.options.matcher || this.matcher + this.sorter = this.options.sorter || this.sorter + this.highlighter = this.options.highlighter || this.highlighter + this.updater = this.options.updater || this.updater + this.source = this.options.source + this.$menu = $(this.options.menu) + this.shown = false + this.listen() + } + + Typeahead.prototype = { + + constructor: Typeahead + + , select: function () { + var val = this.$menu.find('.active').attr('data-value') + this.$element + .val(this.updater(val)) + .change() + return this.hide() + } + + , updater: function (item) { + return item + } + + , show: function () { + var pos = $.extend({}, this.$element.position(), { + height: this.$element[0].offsetHeight + }) + + this.$menu + .insertAfter(this.$element) + .css({ + top: pos.top + pos.height + , left: pos.left + }) + .show() + + this.shown = true + return this + } + + , hide: function () { + this.$menu.hide() + this.shown = false + return this + } + + , lookup: function (event) { + var items + + this.query = this.$element.val() + + if (!this.query || this.query.length < this.options.minLength) { + return this.shown ? this.hide() : this + } + + items = $.isFunction(this.source) ? this.source(this.query, $.proxy(this.process, this)) : this.source + + return items ? this.process(items) : this + } + + , process: function (items) { + var that = this + + items = $.grep(items, function (item) { + return that.matcher(item) + }) + + items = this.sorter(items) + + if (!items.length) { + return this.shown ? this.hide() : this + } + + return this.render(items.slice(0, this.options.items)).show() + } + + , matcher: function (item) { + return ~item.toLowerCase().indexOf(this.query.toLowerCase()) + } + + , sorter: function (items) { + var beginswith = [] + , caseSensitive = [] + , caseInsensitive = [] + , item + + while (item = items.shift()) { + if (!item.toLowerCase().indexOf(this.query.toLowerCase())) beginswith.push(item) + else if (~item.indexOf(this.query)) caseSensitive.push(item) + else caseInsensitive.push(item) + } + + return beginswith.concat(caseSensitive, caseInsensitive) + } + + , highlighter: function (item) { + var query = this.query.replace(/[\-\[\]{}()*+?.,\\\^$|#\s]/g, '\\$&') + return item.replace(new RegExp('(' + query + ')', 'ig'), function ($1, match) { + return '' + match + '' + }) + } + + , render: function (items) { + var that = this + + items = $(items).map(function (i, item) { + i = $(that.options.item).attr('data-value', item) + i.find('a').html(that.highlighter(item)) + return i[0] + }) + + items.first().addClass('active') + this.$menu.html(items) + return this + } + + , next: function (event) { + var active = this.$menu.find('.active').removeClass('active') + , next = active.next() + + if (!next.length) { + next = $(this.$menu.find('li')[0]) + } + + next.addClass('active') + } + + , prev: function (event) { + var active = this.$menu.find('.active').removeClass('active') + , prev = active.prev() + + if (!prev.length) { + prev = this.$menu.find('li').last() + } + + prev.addClass('active') + } + + , listen: function () { + this.$element + .on('focus', $.proxy(this.focus, this)) + .on('blur', $.proxy(this.blur, this)) + .on('keypress', $.proxy(this.keypress, this)) + .on('keyup', $.proxy(this.keyup, this)) + + if (this.eventSupported('keydown')) { + this.$element.on('keydown', $.proxy(this.keydown, this)) + } + + this.$menu + .on('click', $.proxy(this.click, this)) + .on('mouseenter', 'li', $.proxy(this.mouseenter, this)) + .on('mouseleave', 'li', $.proxy(this.mouseleave, this)) + } + + , eventSupported: function(eventName) { + var isSupported = eventName in this.$element + if (!isSupported) { + this.$element.setAttribute(eventName, 'return;') + isSupported = typeof this.$element[eventName] === 'function' + } + return isSupported + } + + , move: function (e) { + if (!this.shown) return + + switch(e.keyCode) { + case 9: // tab + case 13: // enter + case 27: // escape + e.preventDefault() + break + + case 38: // up arrow + e.preventDefault() + this.prev() + break + + case 40: // down arrow + e.preventDefault() + this.next() + break + } + + e.stopPropagation() + } + + , keydown: function (e) { + this.suppressKeyPressRepeat = ~$.inArray(e.keyCode, [40,38,9,13,27]) + this.move(e) + } + + , keypress: function (e) { + if (this.suppressKeyPressRepeat) return + this.move(e) + } + + , keyup: function (e) { + switch(e.keyCode) { + case 40: // down arrow + case 38: // up arrow + case 16: // shift + case 17: // ctrl + case 18: // alt + break + + case 9: // tab + case 13: // enter + if (!this.shown) return + this.select() + break + + case 27: // escape + if (!this.shown) return + this.hide() + break + + default: + this.lookup() + } + + e.stopPropagation() + e.preventDefault() + } + + , focus: function (e) { + this.focused = true + } + + , blur: function (e) { + this.focused = false + if (!this.mousedover && this.shown) this.hide() + } + + , click: function (e) { + e.stopPropagation() + e.preventDefault() + this.select() + this.$element.focus() + } + + , mouseenter: function (e) { + this.mousedover = true + this.$menu.find('.active').removeClass('active') + $(e.currentTarget).addClass('active') + } + + , mouseleave: function (e) { + this.mousedover = false + if (!this.focused && this.shown) this.hide() + } + + } + + + /* TYPEAHEAD PLUGIN DEFINITION + * =========================== */ + + var old = $.fn.typeahead + + $.fn.typeahead = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('typeahead') + , options = typeof option == 'object' && option + if (!data) $this.data('typeahead', (data = new Typeahead(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.typeahead.defaults = { + source: [] + , items: 8 + , menu: '
        ' + , item: '
        • ' + , minLength: 1 + } + + $.fn.typeahead.Constructor = Typeahead + + + /* TYPEAHEAD NO CONFLICT + * =================== */ + + $.fn.typeahead.noConflict = function () { + $.fn.typeahead = old + return this + } + + + /* TYPEAHEAD DATA-API + * ================== */ + + $(document).on('focus.typeahead.data-api', '[data-provide="typeahead"]', function (e) { + var $this = $(this) + if ($this.data('typeahead')) return + $this.typeahead($this.data()) + }) + +}(window.jQuery); diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap.js new file mode 100644 index 000000000..643e71cdf --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap.js @@ -0,0 +1,2280 @@ +/* =================================================== + * bootstrap-transition.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#transitions + * =================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* CSS TRANSITION SUPPORT (http://www.modernizr.com/) + * ======================================================= */ + + $(function () { + + $.support.transition = (function () { + + var transitionEnd = (function () { + + var el = document.createElement('bootstrap') + , transEndEventNames = { + 'WebkitTransition' : 'webkitTransitionEnd' + , 'MozTransition' : 'transitionend' + , 'OTransition' : 'oTransitionEnd otransitionend' + , 'transition' : 'transitionend' + } + , name + + for (name in transEndEventNames){ + if (el.style[name] !== undefined) { + return transEndEventNames[name] + } + } + + }()) + + return transitionEnd && { + end: transitionEnd + } + + })() + + }) + +}(window.jQuery);/* ========================================================== + * bootstrap-alert.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#alerts + * ========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* ALERT CLASS DEFINITION + * ====================== */ + + var dismiss = '[data-dismiss="alert"]' + , Alert = function (el) { + $(el).on('click', dismiss, this.close) + } + + Alert.prototype.close = function (e) { + var $this = $(this) + , selector = $this.attr('data-target') + , $parent + + if (!selector) { + selector = $this.attr('href') + selector = selector && selector.replace(/.*(?=#[^\s]*$)/, '') //strip for ie7 + } + + $parent = $(selector) + + e && e.preventDefault() + + $parent.length || ($parent = $this.hasClass('alert') ? $this : $this.parent()) + + $parent.trigger(e = $.Event('close')) + + if (e.isDefaultPrevented()) return + + $parent.removeClass('in') + + function removeElement() { + $parent + .trigger('closed') + .remove() + } + + $.support.transition && $parent.hasClass('fade') ? + $parent.on($.support.transition.end, removeElement) : + removeElement() + } + + + /* ALERT PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.alert + + $.fn.alert = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('alert') + if (!data) $this.data('alert', (data = new Alert(this))) + if (typeof option == 'string') data[option].call($this) + }) + } + + $.fn.alert.Constructor = Alert + + + /* ALERT NO CONFLICT + * ================= */ + + $.fn.alert.noConflict = function () { + $.fn.alert = old + return this + } + + + /* ALERT DATA-API + * ============== */ + + $(document).on('click.alert.data-api', dismiss, Alert.prototype.close) + +}(window.jQuery);/* ============================================================ + * bootstrap-button.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#buttons + * ============================================================ + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* BUTTON PUBLIC CLASS DEFINITION + * ============================== */ + + var Button = function (element, options) { + this.$element = $(element) + this.options = $.extend({}, $.fn.button.defaults, options) + } + + Button.prototype.setState = function (state) { + var d = 'disabled' + , $el = this.$element + , data = $el.data() + , val = $el.is('input') ? 'val' : 'html' + + state = state + 'Text' + data.resetText || $el.data('resetText', $el[val]()) + + $el[val](data[state] || this.options[state]) + + // push to event loop to allow forms to submit + setTimeout(function () { + state == 'loadingText' ? + $el.addClass(d).attr(d, d) : + $el.removeClass(d).removeAttr(d) + }, 0) + } + + Button.prototype.toggle = function () { + var $parent = this.$element.closest('[data-toggle="buttons-radio"]') + + $parent && $parent + .find('.active') + .removeClass('active') + + this.$element.toggleClass('active') + } + + + /* BUTTON PLUGIN DEFINITION + * ======================== */ + + var old = $.fn.button + + $.fn.button = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('button') + , options = typeof option == 'object' && option + if (!data) $this.data('button', (data = new Button(this, options))) + if (option == 'toggle') data.toggle() + else if (option) data.setState(option) + }) + } + + $.fn.button.defaults = { + loadingText: 'loading...' + } + + $.fn.button.Constructor = Button + + + /* BUTTON NO CONFLICT + * ================== */ + + $.fn.button.noConflict = function () { + $.fn.button = old + return this + } + + + /* BUTTON DATA-API + * =============== */ + + $(document).on('click.button.data-api', '[data-toggle^=button]', function (e) { + var $btn = $(e.target) + if (!$btn.hasClass('btn')) $btn = $btn.closest('.btn') + $btn.button('toggle') + }) + +}(window.jQuery);/* ========================================================== + * bootstrap-carousel.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#carousel + * ========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* CAROUSEL CLASS DEFINITION + * ========================= */ + + var Carousel = function (element, options) { + this.$element = $(element) + this.$indicators = this.$element.find('.carousel-indicators') + this.options = options + this.options.pause == 'hover' && this.$element + .on('mouseenter', $.proxy(this.pause, this)) + .on('mouseleave', $.proxy(this.cycle, this)) + } + + Carousel.prototype = { + + cycle: function (e) { + if (!e) this.paused = false + if (this.interval) clearInterval(this.interval); + this.options.interval + && !this.paused + && (this.interval = setInterval($.proxy(this.next, this), this.options.interval)) + return this + } + + , getActiveIndex: function () { + this.$active = this.$element.find('.item.active') + this.$items = this.$active.parent().children() + return this.$items.index(this.$active) + } + + , to: function (pos) { + var activeIndex = this.getActiveIndex() + , that = this + + if (pos > (this.$items.length - 1) || pos < 0) return + + if (this.sliding) { + return this.$element.one('slid', function () { + that.to(pos) + }) + } + + if (activeIndex == pos) { + return this.pause().cycle() + } + + return this.slide(pos > activeIndex ? 'next' : 'prev', $(this.$items[pos])) + } + + , pause: function (e) { + if (!e) this.paused = true + if (this.$element.find('.next, .prev').length && $.support.transition.end) { + this.$element.trigger($.support.transition.end) + this.cycle(true) + } + clearInterval(this.interval) + this.interval = null + return this + } + + , next: function () { + if (this.sliding) return + return this.slide('next') + } + + , prev: function () { + if (this.sliding) return + return this.slide('prev') + } + + , slide: function (type, next) { + var $active = this.$element.find('.item.active') + , $next = next || $active[type]() + , isCycling = this.interval + , direction = type == 'next' ? 'left' : 'right' + , fallback = type == 'next' ? 'first' : 'last' + , that = this + , e + + this.sliding = true + + isCycling && this.pause() + + $next = $next.length ? $next : this.$element.find('.item')[fallback]() + + e = $.Event('slide', { + relatedTarget: $next[0] + , direction: direction + }) + + if ($next.hasClass('active')) return + + if (this.$indicators.length) { + this.$indicators.find('.active').removeClass('active') + this.$element.one('slid', function () { + var $nextIndicator = $(that.$indicators.children()[that.getActiveIndex()]) + $nextIndicator && $nextIndicator.addClass('active') + }) + } + + if ($.support.transition && this.$element.hasClass('slide')) { + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + $next.addClass(type) + $next[0].offsetWidth // force reflow + $active.addClass(direction) + $next.addClass(direction) + this.$element.one($.support.transition.end, function () { + $next.removeClass([type, direction].join(' ')).addClass('active') + $active.removeClass(['active', direction].join(' ')) + that.sliding = false + setTimeout(function () { that.$element.trigger('slid') }, 0) + }) + } else { + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + $active.removeClass('active') + $next.addClass('active') + this.sliding = false + this.$element.trigger('slid') + } + + isCycling && this.cycle() + + return this + } + + } + + + /* CAROUSEL PLUGIN DEFINITION + * ========================== */ + + var old = $.fn.carousel + + $.fn.carousel = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('carousel') + , options = $.extend({}, $.fn.carousel.defaults, typeof option == 'object' && option) + , action = typeof option == 'string' ? option : options.slide + if (!data) $this.data('carousel', (data = new Carousel(this, options))) + if (typeof option == 'number') data.to(option) + else if (action) data[action]() + else if (options.interval) data.pause().cycle() + }) + } + + $.fn.carousel.defaults = { + interval: 5000 + , pause: 'hover' + } + + $.fn.carousel.Constructor = Carousel + + + /* CAROUSEL NO CONFLICT + * ==================== */ + + $.fn.carousel.noConflict = function () { + $.fn.carousel = old + return this + } + + /* CAROUSEL DATA-API + * ================= */ + + $(document).on('click.carousel.data-api', '[data-slide], [data-slide-to]', function (e) { + var $this = $(this), href + , $target = $($this.attr('data-target') || (href = $this.attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '')) //strip for ie7 + , options = $.extend({}, $target.data(), $this.data()) + , slideIndex + + $target.carousel(options) + + if (slideIndex = $this.attr('data-slide-to')) { + $target.data('carousel').pause().to(slideIndex).cycle() + } + + e.preventDefault() + }) + +}(window.jQuery);/* ============================================================= + * bootstrap-collapse.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#collapse + * ============================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* COLLAPSE PUBLIC CLASS DEFINITION + * ================================ */ + + var Collapse = function (element, options) { + this.$element = $(element) + this.options = $.extend({}, $.fn.collapse.defaults, options) + + if (this.options.parent) { + this.$parent = $(this.options.parent) + } + + this.options.toggle && this.toggle() + } + + Collapse.prototype = { + + constructor: Collapse + + , dimension: function () { + var hasWidth = this.$element.hasClass('width') + return hasWidth ? 'width' : 'height' + } + + , show: function () { + var dimension + , scroll + , actives + , hasData + + if (this.transitioning || this.$element.hasClass('in')) return + + dimension = this.dimension() + scroll = $.camelCase(['scroll', dimension].join('-')) + actives = this.$parent && this.$parent.find('> .accordion-group > .in') + + if (actives && actives.length) { + hasData = actives.data('collapse') + if (hasData && hasData.transitioning) return + actives.collapse('hide') + hasData || actives.data('collapse', null) + } + + this.$element[dimension](0) + this.transition('addClass', $.Event('show'), 'shown') + $.support.transition && this.$element[dimension](this.$element[0][scroll]) + } + + , hide: function () { + var dimension + if (this.transitioning || !this.$element.hasClass('in')) return + dimension = this.dimension() + this.reset(this.$element[dimension]()) + this.transition('removeClass', $.Event('hide'), 'hidden') + this.$element[dimension](0) + } + + , reset: function (size) { + var dimension = this.dimension() + + this.$element + .removeClass('collapse') + [dimension](size || 'auto') + [0].offsetWidth + + this.$element[size !== null ? 'addClass' : 'removeClass']('collapse') + + return this + } + + , transition: function (method, startEvent, completeEvent) { + var that = this + , complete = function () { + if (startEvent.type == 'show') that.reset() + that.transitioning = 0 + that.$element.trigger(completeEvent) + } + + this.$element.trigger(startEvent) + + if (startEvent.isDefaultPrevented()) return + + this.transitioning = 1 + + this.$element[method]('in') + + $.support.transition && this.$element.hasClass('collapse') ? + this.$element.one($.support.transition.end, complete) : + complete() + } + + , toggle: function () { + this[this.$element.hasClass('in') ? 'hide' : 'show']() + } + + } + + + /* COLLAPSE PLUGIN DEFINITION + * ========================== */ + + var old = $.fn.collapse + + $.fn.collapse = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('collapse') + , options = $.extend({}, $.fn.collapse.defaults, $this.data(), typeof option == 'object' && option) + if (!data) $this.data('collapse', (data = new Collapse(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.collapse.defaults = { + toggle: true + } + + $.fn.collapse.Constructor = Collapse + + + /* COLLAPSE NO CONFLICT + * ==================== */ + + $.fn.collapse.noConflict = function () { + $.fn.collapse = old + return this + } + + + /* COLLAPSE DATA-API + * ================= */ + + $(document).on('click.collapse.data-api', '[data-toggle=collapse]', function (e) { + var $this = $(this), href + , target = $this.attr('data-target') + || e.preventDefault() + || (href = $this.attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '') //strip for ie7 + , option = $(target).data('collapse') ? 'toggle' : $this.data() + $this[$(target).hasClass('in') ? 'addClass' : 'removeClass']('collapsed') + $(target).collapse(option) + }) + +}(window.jQuery);/* ============================================================ + * bootstrap-dropdown.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#dropdowns + * ============================================================ + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* DROPDOWN CLASS DEFINITION + * ========================= */ + + var toggle = '[data-toggle=dropdown]' + , Dropdown = function (element) { + var $el = $(element).on('click.dropdown.data-api', this.toggle) + $('html').on('click.dropdown.data-api', function () { + $el.parent().removeClass('open') + }) + } + + Dropdown.prototype = { + + constructor: Dropdown + + , toggle: function (e) { + var $this = $(this) + , $parent + , isActive + + if ($this.is('.disabled, :disabled')) return + + $parent = getParent($this) + + isActive = $parent.hasClass('open') + + clearMenus() + + if (!isActive) { + if ('ontouchstart' in document.documentElement) { + // if mobile we we use a backdrop because click events don't delegate + $('
        ').insertBefore($(this)).on('click', clearMenus) + } + $parent.toggleClass('open') + } + + $this.focus() + + return false + } + + , keydown: function (e) { + var $this + , $items + , $active + , $parent + , isActive + , index + + if (!/(38|40|27)/.test(e.keyCode)) return + + $this = $(this) + + e.preventDefault() + e.stopPropagation() + + if ($this.is('.disabled, :disabled')) return + + $parent = getParent($this) + + isActive = $parent.hasClass('open') + + if (!isActive || (isActive && e.keyCode == 27)) { + if (e.which == 27) $parent.find(toggle).focus() + return $this.click() + } + + $items = $('[role=menu] li:not(.divider):visible a', $parent) + + if (!$items.length) return + + index = $items.index($items.filter(':focus')) + + if (e.keyCode == 38 && index > 0) index-- // up + if (e.keyCode == 40 && index < $items.length - 1) index++ // down + if (!~index) index = 0 + + $items + .eq(index) + .focus() + } + + } + + function clearMenus() { + $('.dropdown-backdrop').remove() + $(toggle).each(function () { + getParent($(this)).removeClass('open') + }) + } + + function getParent($this) { + var selector = $this.attr('data-target') + , $parent + + if (!selector) { + selector = $this.attr('href') + selector = selector && /#/.test(selector) && selector.replace(/.*(?=#[^\s]*$)/, '') //strip for ie7 + } + + $parent = selector && $(selector) + + if (!$parent || !$parent.length) $parent = $this.parent() + + return $parent + } + + + /* DROPDOWN PLUGIN DEFINITION + * ========================== */ + + var old = $.fn.dropdown + + $.fn.dropdown = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('dropdown') + if (!data) $this.data('dropdown', (data = new Dropdown(this))) + if (typeof option == 'string') data[option].call($this) + }) + } + + $.fn.dropdown.Constructor = Dropdown + + + /* DROPDOWN NO CONFLICT + * ==================== */ + + $.fn.dropdown.noConflict = function () { + $.fn.dropdown = old + return this + } + + + /* APPLY TO STANDARD DROPDOWN ELEMENTS + * =================================== */ + + $(document) + .on('click.dropdown.data-api', clearMenus) + .on('click.dropdown.data-api', '.dropdown form', function (e) { e.stopPropagation() }) + .on('click.dropdown.data-api' , toggle, Dropdown.prototype.toggle) + .on('keydown.dropdown.data-api', toggle + ', [role=menu]' , Dropdown.prototype.keydown) + +}(window.jQuery); +/* ========================================================= + * bootstrap-modal.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#modals + * ========================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================= */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* MODAL CLASS DEFINITION + * ====================== */ + + var Modal = function (element, options) { + this.options = options + this.$element = $(element) + .delegate('[data-dismiss="modal"]', 'click.dismiss.modal', $.proxy(this.hide, this)) + this.options.remote && this.$element.find('.modal-body').load(this.options.remote) + } + + Modal.prototype = { + + constructor: Modal + + , toggle: function () { + return this[!this.isShown ? 'show' : 'hide']() + } + + , show: function () { + var that = this + , e = $.Event('show') + + this.$element.trigger(e) + + if (this.isShown || e.isDefaultPrevented()) return + + this.isShown = true + + this.escape() + + this.backdrop(function () { + var transition = $.support.transition && that.$element.hasClass('fade') + + if (!that.$element.parent().length) { + that.$element.appendTo(document.body) //don't move modals dom position + } + + that.$element.show() + + if (transition) { + that.$element[0].offsetWidth // force reflow + } + + that.$element + .addClass('in') + .attr('aria-hidden', false) + + that.enforceFocus() + + transition ? + that.$element.one($.support.transition.end, function () { that.$element.focus().trigger('shown') }) : + that.$element.focus().trigger('shown') + + }) + } + + , hide: function (e) { + e && e.preventDefault() + + var that = this + + e = $.Event('hide') + + this.$element.trigger(e) + + if (!this.isShown || e.isDefaultPrevented()) return + + this.isShown = false + + this.escape() + + $(document).off('focusin.modal') + + this.$element + .removeClass('in') + .attr('aria-hidden', true) + + $.support.transition && this.$element.hasClass('fade') ? + this.hideWithTransition() : + this.hideModal() + } + + , enforceFocus: function () { + var that = this + $(document).on('focusin.modal', function (e) { + if (that.$element[0] !== e.target && !that.$element.has(e.target).length) { + that.$element.focus() + } + }) + } + + , escape: function () { + var that = this + if (this.isShown && this.options.keyboard) { + this.$element.on('keyup.dismiss.modal', function ( e ) { + e.which == 27 && that.hide() + }) + } else if (!this.isShown) { + this.$element.off('keyup.dismiss.modal') + } + } + + , hideWithTransition: function () { + var that = this + , timeout = setTimeout(function () { + that.$element.off($.support.transition.end) + that.hideModal() + }, 500) + + this.$element.one($.support.transition.end, function () { + clearTimeout(timeout) + that.hideModal() + }) + } + + , hideModal: function () { + var that = this + this.$element.hide() + this.backdrop(function () { + that.removeBackdrop() + that.$element.trigger('hidden') + }) + } + + , removeBackdrop: function () { + this.$backdrop && this.$backdrop.remove() + this.$backdrop = null + } + + , backdrop: function (callback) { + var that = this + , animate = this.$element.hasClass('fade') ? 'fade' : '' + + if (this.isShown && this.options.backdrop) { + var doAnimate = $.support.transition && animate + + this.$backdrop = $('
        ') + .appendTo(document.body) + + this.$backdrop.click( + this.options.backdrop == 'static' ? + $.proxy(this.$element[0].focus, this.$element[0]) + : $.proxy(this.hide, this) + ) + + if (doAnimate) this.$backdrop[0].offsetWidth // force reflow + + this.$backdrop.addClass('in') + + if (!callback) return + + doAnimate ? + this.$backdrop.one($.support.transition.end, callback) : + callback() + + } else if (!this.isShown && this.$backdrop) { + this.$backdrop.removeClass('in') + + $.support.transition && this.$element.hasClass('fade')? + this.$backdrop.one($.support.transition.end, callback) : + callback() + + } else if (callback) { + callback() + } + } + } + + + /* MODAL PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.modal + + $.fn.modal = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('modal') + , options = $.extend({}, $.fn.modal.defaults, $this.data(), typeof option == 'object' && option) + if (!data) $this.data('modal', (data = new Modal(this, options))) + if (typeof option == 'string') data[option]() + else if (options.show) data.show() + }) + } + + $.fn.modal.defaults = { + backdrop: true + , keyboard: true + , show: true + } + + $.fn.modal.Constructor = Modal + + + /* MODAL NO CONFLICT + * ================= */ + + $.fn.modal.noConflict = function () { + $.fn.modal = old + return this + } + + + /* MODAL DATA-API + * ============== */ + + $(document).on('click.modal.data-api', '[data-toggle="modal"]', function (e) { + var $this = $(this) + , href = $this.attr('href') + , $target = $($this.attr('data-target') || (href && href.replace(/.*(?=#[^\s]+$)/, ''))) //strip for ie7 + , option = $target.data('modal') ? 'toggle' : $.extend({ remote:!/#/.test(href) && href }, $target.data(), $this.data()) + + e.preventDefault() + + $target + .modal(option) + .one('hide', function () { + $this.focus() + }) + }) + +}(window.jQuery); +/* =========================================================== + * bootstrap-tooltip.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#tooltips + * Inspired by the original jQuery.tipsy by Jason Frame + * =========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* TOOLTIP PUBLIC CLASS DEFINITION + * =============================== */ + + var Tooltip = function (element, options) { + this.init('tooltip', element, options) + } + + Tooltip.prototype = { + + constructor: Tooltip + + , init: function (type, element, options) { + var eventIn + , eventOut + , triggers + , trigger + , i + + this.type = type + this.$element = $(element) + this.options = this.getOptions(options) + this.enabled = true + + triggers = this.options.trigger.split(' ') + + for (i = triggers.length; i--;) { + trigger = triggers[i] + if (trigger == 'click') { + this.$element.on('click.' + this.type, this.options.selector, $.proxy(this.toggle, this)) + } else if (trigger != 'manual') { + eventIn = trigger == 'hover' ? 'mouseenter' : 'focus' + eventOut = trigger == 'hover' ? 'mouseleave' : 'blur' + this.$element.on(eventIn + '.' + this.type, this.options.selector, $.proxy(this.enter, this)) + this.$element.on(eventOut + '.' + this.type, this.options.selector, $.proxy(this.leave, this)) + } + } + + this.options.selector ? + (this._options = $.extend({}, this.options, { trigger: 'manual', selector: '' })) : + this.fixTitle() + } + + , getOptions: function (options) { + options = $.extend({}, $.fn[this.type].defaults, this.$element.data(), options) + + if (options.delay && typeof options.delay == 'number') { + options.delay = { + show: options.delay + , hide: options.delay + } + } + + return options + } + + , enter: function (e) { + var defaults = $.fn[this.type].defaults + , options = {} + , self + + this._options && $.each(this._options, function (key, value) { + if (defaults[key] != value) options[key] = value + }, this) + + self = $(e.currentTarget)[this.type](options).data(this.type) + + if (!self.options.delay || !self.options.delay.show) return self.show() + + clearTimeout(this.timeout) + self.hoverState = 'in' + this.timeout = setTimeout(function() { + if (self.hoverState == 'in') self.show() + }, self.options.delay.show) + } + + , leave: function (e) { + var self = $(e.currentTarget)[this.type](this._options).data(this.type) + + if (this.timeout) clearTimeout(this.timeout) + if (!self.options.delay || !self.options.delay.hide) return self.hide() + + self.hoverState = 'out' + this.timeout = setTimeout(function() { + if (self.hoverState == 'out') self.hide() + }, self.options.delay.hide) + } + + , show: function () { + var $tip + , pos + , actualWidth + , actualHeight + , placement + , tp + , e = $.Event('show') + + if (this.hasContent() && this.enabled) { + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + $tip = this.tip() + this.setContent() + + if (this.options.animation) { + $tip.addClass('fade') + } + + placement = typeof this.options.placement == 'function' ? + this.options.placement.call(this, $tip[0], this.$element[0]) : + this.options.placement + + $tip + .detach() + .css({ top: 0, left: 0, display: 'block' }) + + this.options.container ? $tip.appendTo(this.options.container) : $tip.insertAfter(this.$element) + + pos = this.getPosition() + + actualWidth = $tip[0].offsetWidth + actualHeight = $tip[0].offsetHeight + + switch (placement) { + case 'bottom': + tp = {top: pos.top + pos.height, left: pos.left + pos.width / 2 - actualWidth / 2} + break + case 'top': + tp = {top: pos.top - actualHeight, left: pos.left + pos.width / 2 - actualWidth / 2} + break + case 'left': + tp = {top: pos.top + pos.height / 2 - actualHeight / 2, left: pos.left - actualWidth} + break + case 'right': + tp = {top: pos.top + pos.height / 2 - actualHeight / 2, left: pos.left + pos.width} + break + } + + this.applyPlacement(tp, placement) + this.$element.trigger('shown') + } + } + + , applyPlacement: function(offset, placement){ + var $tip = this.tip() + , width = $tip[0].offsetWidth + , height = $tip[0].offsetHeight + , actualWidth + , actualHeight + , delta + , replace + + $tip + .offset(offset) + .addClass(placement) + .addClass('in') + + actualWidth = $tip[0].offsetWidth + actualHeight = $tip[0].offsetHeight + + if (placement == 'top' && actualHeight != height) { + offset.top = offset.top + height - actualHeight + replace = true + } + + if (placement == 'bottom' || placement == 'top') { + delta = 0 + + if (offset.left < 0){ + delta = offset.left * -2 + offset.left = 0 + $tip.offset(offset) + actualWidth = $tip[0].offsetWidth + actualHeight = $tip[0].offsetHeight + } + + this.replaceArrow(delta - width + actualWidth, actualWidth, 'left') + } else { + this.replaceArrow(actualHeight - height, actualHeight, 'top') + } + + if (replace) $tip.offset(offset) + } + + , replaceArrow: function(delta, dimension, position){ + this + .arrow() + .css(position, delta ? (50 * (1 - delta / dimension) + "%") : '') + } + + , setContent: function () { + var $tip = this.tip() + , title = this.getTitle() + + $tip.find('.tooltip-inner')[this.options.html ? 'html' : 'text'](title) + $tip.removeClass('fade in top bottom left right') + } + + , hide: function () { + var that = this + , $tip = this.tip() + , e = $.Event('hide') + + this.$element.trigger(e) + if (e.isDefaultPrevented()) return + + $tip.removeClass('in') + + function removeWithAnimation() { + var timeout = setTimeout(function () { + $tip.off($.support.transition.end).detach() + }, 500) + + $tip.one($.support.transition.end, function () { + clearTimeout(timeout) + $tip.detach() + }) + } + + $.support.transition && this.$tip.hasClass('fade') ? + removeWithAnimation() : + $tip.detach() + + this.$element.trigger('hidden') + + return this + } + + , fixTitle: function () { + var $e = this.$element + if ($e.attr('title') || typeof($e.attr('data-original-title')) != 'string') { + $e.attr('data-original-title', $e.attr('title') || '').attr('title', '') + } + } + + , hasContent: function () { + return this.getTitle() + } + + , getPosition: function () { + var el = this.$element[0] + return $.extend({}, (typeof el.getBoundingClientRect == 'function') ? el.getBoundingClientRect() : { + width: el.offsetWidth + , height: el.offsetHeight + }, this.$element.offset()) + } + + , getTitle: function () { + var title + , $e = this.$element + , o = this.options + + title = $e.attr('data-original-title') + || (typeof o.title == 'function' ? o.title.call($e[0]) : o.title) + + return title + } + + , tip: function () { + return this.$tip = this.$tip || $(this.options.template) + } + + , arrow: function(){ + return this.$arrow = this.$arrow || this.tip().find(".tooltip-arrow") + } + + , validate: function () { + if (!this.$element[0].parentNode) { + this.hide() + this.$element = null + this.options = null + } + } + + , enable: function () { + this.enabled = true + } + + , disable: function () { + this.enabled = false + } + + , toggleEnabled: function () { + this.enabled = !this.enabled + } + + , toggle: function (e) { + var self = e ? $(e.currentTarget)[this.type](this._options).data(this.type) : this + self.tip().hasClass('in') ? self.hide() : self.show() + } + + , destroy: function () { + this.hide().$element.off('.' + this.type).removeData(this.type) + } + + } + + + /* TOOLTIP PLUGIN DEFINITION + * ========================= */ + + var old = $.fn.tooltip + + $.fn.tooltip = function ( option ) { + return this.each(function () { + var $this = $(this) + , data = $this.data('tooltip') + , options = typeof option == 'object' && option + if (!data) $this.data('tooltip', (data = new Tooltip(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.tooltip.Constructor = Tooltip + + $.fn.tooltip.defaults = { + animation: true + , placement: 'top' + , selector: false + , template: '
        ' + , trigger: 'hover focus' + , title: '' + , delay: 0 + , html: false + , container: false + } + + + /* TOOLTIP NO CONFLICT + * =================== */ + + $.fn.tooltip.noConflict = function () { + $.fn.tooltip = old + return this + } + +}(window.jQuery); +/* =========================================================== + * bootstrap-popover.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#popovers + * =========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * =========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* POPOVER PUBLIC CLASS DEFINITION + * =============================== */ + + var Popover = function (element, options) { + this.init('popover', element, options) + } + + + /* NOTE: POPOVER EXTENDS BOOTSTRAP-TOOLTIP.js + ========================================== */ + + Popover.prototype = $.extend({}, $.fn.tooltip.Constructor.prototype, { + + constructor: Popover + + , setContent: function () { + var $tip = this.tip() + , title = this.getTitle() + , content = this.getContent() + + $tip.find('.popover-title')[this.options.html ? 'html' : 'text'](title) + $tip.find('.popover-content')[this.options.html ? 'html' : 'text'](content) + + $tip.removeClass('fade top bottom left right in') + } + + , hasContent: function () { + return this.getTitle() || this.getContent() + } + + , getContent: function () { + var content + , $e = this.$element + , o = this.options + + content = (typeof o.content == 'function' ? o.content.call($e[0]) : o.content) + || $e.attr('data-content') + + return content + } + + , tip: function () { + if (!this.$tip) { + this.$tip = $(this.options.template) + } + return this.$tip + } + + , destroy: function () { + this.hide().$element.off('.' + this.type).removeData(this.type) + } + + }) + + + /* POPOVER PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.popover + + $.fn.popover = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('popover') + , options = typeof option == 'object' && option + if (!data) $this.data('popover', (data = new Popover(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.popover.Constructor = Popover + + $.fn.popover.defaults = $.extend({} , $.fn.tooltip.defaults, { + placement: 'right' + , trigger: 'click' + , content: '' + , template: '

        ' + }) + + + /* POPOVER NO CONFLICT + * =================== */ + + $.fn.popover.noConflict = function () { + $.fn.popover = old + return this + } + +}(window.jQuery); +/* ============================================================= + * bootstrap-scrollspy.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#scrollspy + * ============================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* SCROLLSPY CLASS DEFINITION + * ========================== */ + + function ScrollSpy(element, options) { + var process = $.proxy(this.process, this) + , $element = $(element).is('body') ? $(window) : $(element) + , href + this.options = $.extend({}, $.fn.scrollspy.defaults, options) + this.$scrollElement = $element.on('scroll.scroll-spy.data-api', process) + this.selector = (this.options.target + || ((href = $(element).attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '')) //strip for ie7 + || '') + ' .nav li > a' + this.$body = $('body') + this.refresh() + this.process() + } + + ScrollSpy.prototype = { + + constructor: ScrollSpy + + , refresh: function () { + var self = this + , $targets + + this.offsets = $([]) + this.targets = $([]) + + $targets = this.$body + .find(this.selector) + .map(function () { + var $el = $(this) + , href = $el.data('target') || $el.attr('href') + , $href = /^#\w/.test(href) && $(href) + return ( $href + && $href.length + && [[ $href.position().top + (!$.isWindow(self.$scrollElement.get(0)) && self.$scrollElement.scrollTop()), href ]] ) || null + }) + .sort(function (a, b) { return a[0] - b[0] }) + .each(function () { + self.offsets.push(this[0]) + self.targets.push(this[1]) + }) + } + + , process: function () { + var scrollTop = this.$scrollElement.scrollTop() + this.options.offset + , scrollHeight = this.$scrollElement[0].scrollHeight || this.$body[0].scrollHeight + , maxScroll = scrollHeight - this.$scrollElement.height() + , offsets = this.offsets + , targets = this.targets + , activeTarget = this.activeTarget + , i + + if (scrollTop >= maxScroll) { + return activeTarget != (i = targets.last()[0]) + && this.activate ( i ) + } + + for (i = offsets.length; i--;) { + activeTarget != targets[i] + && scrollTop >= offsets[i] + && (!offsets[i + 1] || scrollTop <= offsets[i + 1]) + && this.activate( targets[i] ) + } + } + + , activate: function (target) { + var active + , selector + + this.activeTarget = target + + $(this.selector) + .parent('.active') + .removeClass('active') + + selector = this.selector + + '[data-target="' + target + '"],' + + this.selector + '[href="' + target + '"]' + + active = $(selector) + .parent('li') + .addClass('active') + + if (active.parent('.dropdown-menu').length) { + active = active.closest('li.dropdown').addClass('active') + } + + active.trigger('activate') + } + + } + + + /* SCROLLSPY PLUGIN DEFINITION + * =========================== */ + + var old = $.fn.scrollspy + + $.fn.scrollspy = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('scrollspy') + , options = typeof option == 'object' && option + if (!data) $this.data('scrollspy', (data = new ScrollSpy(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.scrollspy.Constructor = ScrollSpy + + $.fn.scrollspy.defaults = { + offset: 10 + } + + + /* SCROLLSPY NO CONFLICT + * ===================== */ + + $.fn.scrollspy.noConflict = function () { + $.fn.scrollspy = old + return this + } + + + /* SCROLLSPY DATA-API + * ================== */ + + $(window).on('load', function () { + $('[data-spy="scroll"]').each(function () { + var $spy = $(this) + $spy.scrollspy($spy.data()) + }) + }) + +}(window.jQuery);/* ======================================================== + * bootstrap-tab.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#tabs + * ======================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ======================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* TAB CLASS DEFINITION + * ==================== */ + + var Tab = function (element) { + this.element = $(element) + } + + Tab.prototype = { + + constructor: Tab + + , show: function () { + var $this = this.element + , $ul = $this.closest('ul:not(.dropdown-menu)') + , selector = $this.attr('data-target') + , previous + , $target + , e + + if (!selector) { + selector = $this.attr('href') + selector = selector && selector.replace(/.*(?=#[^\s]*$)/, '') //strip for ie7 + } + + if ( $this.parent('li').hasClass('active') ) return + + previous = $ul.find('.active:last a')[0] + + e = $.Event('show', { + relatedTarget: previous + }) + + $this.trigger(e) + + if (e.isDefaultPrevented()) return + + $target = $(selector) + + this.activate($this.parent('li'), $ul) + this.activate($target, $target.parent(), function () { + $this.trigger({ + type: 'shown' + , relatedTarget: previous + }) + }) + } + + , activate: function ( element, container, callback) { + var $active = container.find('> .active') + , transition = callback + && $.support.transition + && $active.hasClass('fade') + + function next() { + $active + .removeClass('active') + .find('> .dropdown-menu > .active') + .removeClass('active') + + element.addClass('active') + + if (transition) { + element[0].offsetWidth // reflow for transition + element.addClass('in') + } else { + element.removeClass('fade') + } + + if ( element.parent('.dropdown-menu') ) { + element.closest('li.dropdown').addClass('active') + } + + callback && callback() + } + + transition ? + $active.one($.support.transition.end, next) : + next() + + $active.removeClass('in') + } + } + + + /* TAB PLUGIN DEFINITION + * ===================== */ + + var old = $.fn.tab + + $.fn.tab = function ( option ) { + return this.each(function () { + var $this = $(this) + , data = $this.data('tab') + if (!data) $this.data('tab', (data = new Tab(this))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.tab.Constructor = Tab + + + /* TAB NO CONFLICT + * =============== */ + + $.fn.tab.noConflict = function () { + $.fn.tab = old + return this + } + + + /* TAB DATA-API + * ============ */ + + $(document).on('click.tab.data-api', '[data-toggle="tab"], [data-toggle="pill"]', function (e) { + e.preventDefault() + $(this).tab('show') + }) + +}(window.jQuery);/* ============================================================= + * bootstrap-typeahead.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#typeahead + * ============================================================= + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ============================================================ */ + + +!function($){ + + "use strict"; // jshint ;_; + + + /* TYPEAHEAD PUBLIC CLASS DEFINITION + * ================================= */ + + var Typeahead = function (element, options) { + this.$element = $(element) + this.options = $.extend({}, $.fn.typeahead.defaults, options) + this.matcher = this.options.matcher || this.matcher + this.sorter = this.options.sorter || this.sorter + this.highlighter = this.options.highlighter || this.highlighter + this.updater = this.options.updater || this.updater + this.source = this.options.source + this.$menu = $(this.options.menu) + this.shown = false + this.listen() + } + + Typeahead.prototype = { + + constructor: Typeahead + + , select: function () { + var val = this.$menu.find('.active').attr('data-value') + this.$element + .val(this.updater(val)) + .change() + return this.hide() + } + + , updater: function (item) { + return item + } + + , show: function () { + var pos = $.extend({}, this.$element.position(), { + height: this.$element[0].offsetHeight + }) + + this.$menu + .insertAfter(this.$element) + .css({ + top: pos.top + pos.height + , left: pos.left + }) + .show() + + this.shown = true + return this + } + + , hide: function () { + this.$menu.hide() + this.shown = false + return this + } + + , lookup: function (event) { + var items + + this.query = this.$element.val() + + if (!this.query || this.query.length < this.options.minLength) { + return this.shown ? this.hide() : this + } + + items = $.isFunction(this.source) ? this.source(this.query, $.proxy(this.process, this)) : this.source + + return items ? this.process(items) : this + } + + , process: function (items) { + var that = this + + items = $.grep(items, function (item) { + return that.matcher(item) + }) + + items = this.sorter(items) + + if (!items.length) { + return this.shown ? this.hide() : this + } + + return this.render(items.slice(0, this.options.items)).show() + } + + , matcher: function (item) { + return ~item.toLowerCase().indexOf(this.query.toLowerCase()) + } + + , sorter: function (items) { + var beginswith = [] + , caseSensitive = [] + , caseInsensitive = [] + , item + + while (item = items.shift()) { + if (!item.toLowerCase().indexOf(this.query.toLowerCase())) beginswith.push(item) + else if (~item.indexOf(this.query)) caseSensitive.push(item) + else caseInsensitive.push(item) + } + + return beginswith.concat(caseSensitive, caseInsensitive) + } + + , highlighter: function (item) { + var query = this.query.replace(/[\-\[\]{}()*+?.,\\\^$|#\s]/g, '\\$&') + return item.replace(new RegExp('(' + query + ')', 'ig'), function ($1, match) { + return '' + match + '' + }) + } + + , render: function (items) { + var that = this + + items = $(items).map(function (i, item) { + i = $(that.options.item).attr('data-value', item) + i.find('a').html(that.highlighter(item)) + return i[0] + }) + + items.first().addClass('active') + this.$menu.html(items) + return this + } + + , next: function (event) { + var active = this.$menu.find('.active').removeClass('active') + , next = active.next() + + if (!next.length) { + next = $(this.$menu.find('li')[0]) + } + + next.addClass('active') + } + + , prev: function (event) { + var active = this.$menu.find('.active').removeClass('active') + , prev = active.prev() + + if (!prev.length) { + prev = this.$menu.find('li').last() + } + + prev.addClass('active') + } + + , listen: function () { + this.$element + .on('focus', $.proxy(this.focus, this)) + .on('blur', $.proxy(this.blur, this)) + .on('keypress', $.proxy(this.keypress, this)) + .on('keyup', $.proxy(this.keyup, this)) + + if (this.eventSupported('keydown')) { + this.$element.on('keydown', $.proxy(this.keydown, this)) + } + + this.$menu + .on('click', $.proxy(this.click, this)) + .on('mouseenter', 'li', $.proxy(this.mouseenter, this)) + .on('mouseleave', 'li', $.proxy(this.mouseleave, this)) + } + + , eventSupported: function(eventName) { + var isSupported = eventName in this.$element + if (!isSupported) { + this.$element.setAttribute(eventName, 'return;') + isSupported = typeof this.$element[eventName] === 'function' + } + return isSupported + } + + , move: function (e) { + if (!this.shown) return + + switch(e.keyCode) { + case 9: // tab + case 13: // enter + case 27: // escape + e.preventDefault() + break + + case 38: // up arrow + e.preventDefault() + this.prev() + break + + case 40: // down arrow + e.preventDefault() + this.next() + break + } + + e.stopPropagation() + } + + , keydown: function (e) { + this.suppressKeyPressRepeat = ~$.inArray(e.keyCode, [40,38,9,13,27]) + this.move(e) + } + + , keypress: function (e) { + if (this.suppressKeyPressRepeat) return + this.move(e) + } + + , keyup: function (e) { + switch(e.keyCode) { + case 40: // down arrow + case 38: // up arrow + case 16: // shift + case 17: // ctrl + case 18: // alt + break + + case 9: // tab + case 13: // enter + if (!this.shown) return + this.select() + break + + case 27: // escape + if (!this.shown) return + this.hide() + break + + default: + this.lookup() + } + + e.stopPropagation() + e.preventDefault() + } + + , focus: function (e) { + this.focused = true + } + + , blur: function (e) { + this.focused = false + if (!this.mousedover && this.shown) this.hide() + } + + , click: function (e) { + e.stopPropagation() + e.preventDefault() + this.select() + this.$element.focus() + } + + , mouseenter: function (e) { + this.mousedover = true + this.$menu.find('.active').removeClass('active') + $(e.currentTarget).addClass('active') + } + + , mouseleave: function (e) { + this.mousedover = false + if (!this.focused && this.shown) this.hide() + } + + } + + + /* TYPEAHEAD PLUGIN DEFINITION + * =========================== */ + + var old = $.fn.typeahead + + $.fn.typeahead = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('typeahead') + , options = typeof option == 'object' && option + if (!data) $this.data('typeahead', (data = new Typeahead(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.typeahead.defaults = { + source: [] + , items: 8 + , menu: '
          ' + , item: '
          • ' + , minLength: 1 + } + + $.fn.typeahead.Constructor = Typeahead + + + /* TYPEAHEAD NO CONFLICT + * =================== */ + + $.fn.typeahead.noConflict = function () { + $.fn.typeahead = old + return this + } + + + /* TYPEAHEAD DATA-API + * ================== */ + + $(document).on('focus.typeahead.data-api', '[data-provide="typeahead"]', function (e) { + var $this = $(this) + if ($this.data('typeahead')) return + $this.typeahead($this.data()) + }) + +}(window.jQuery); +/* ========================================================== + * bootstrap-affix.js v2.3.2 + * http://twitter.github.com/bootstrap/javascript.html#affix + * ========================================================== + * Copyright 2012 Twitter, Inc. + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + * ========================================================== */ + + +!function ($) { + + "use strict"; // jshint ;_; + + + /* AFFIX CLASS DEFINITION + * ====================== */ + + var Affix = function (element, options) { + this.options = $.extend({}, $.fn.affix.defaults, options) + this.$window = $(window) + .on('scroll.affix.data-api', $.proxy(this.checkPosition, this)) + .on('click.affix.data-api', $.proxy(function () { setTimeout($.proxy(this.checkPosition, this), 1) }, this)) + this.$element = $(element) + this.checkPosition() + } + + Affix.prototype.checkPosition = function () { + if (!this.$element.is(':visible')) return + + var scrollHeight = $(document).height() + , scrollTop = this.$window.scrollTop() + , position = this.$element.offset() + , offset = this.options.offset + , offsetBottom = offset.bottom + , offsetTop = offset.top + , reset = 'affix affix-top affix-bottom' + , affix + + if (typeof offset != 'object') offsetBottom = offsetTop = offset + if (typeof offsetTop == 'function') offsetTop = offset.top() + if (typeof offsetBottom == 'function') offsetBottom = offset.bottom() + + affix = this.unpin != null && (scrollTop + this.unpin <= position.top) ? + false : offsetBottom != null && (position.top + this.$element.height() >= scrollHeight - offsetBottom) ? + 'bottom' : offsetTop != null && scrollTop <= offsetTop ? + 'top' : false + + if (this.affixed === affix) return + + this.affixed = affix + this.unpin = affix == 'bottom' ? position.top - scrollTop : null + + this.$element.removeClass(reset).addClass('affix' + (affix ? '-' + affix : '')) + } + + + /* AFFIX PLUGIN DEFINITION + * ======================= */ + + var old = $.fn.affix + + $.fn.affix = function (option) { + return this.each(function () { + var $this = $(this) + , data = $this.data('affix') + , options = typeof option == 'object' && option + if (!data) $this.data('affix', (data = new Affix(this, options))) + if (typeof option == 'string') data[option]() + }) + } + + $.fn.affix.Constructor = Affix + + $.fn.affix.defaults = { + offset: 0 + } + + + /* AFFIX NO CONFLICT + * ================= */ + + $.fn.affix.noConflict = function () { + $.fn.affix = old + return this + } + + + /* AFFIX DATA-API + * ============== */ + + $(window).on('load', function () { + $('[data-spy="affix"]').each(function () { + var $spy = $(this) + , data = $spy.data() + + data.offset = data.offset || {} + + data.offsetBottom && (data.offset.bottom = data.offsetBottom) + data.offsetTop && (data.offset.top = data.offsetTop) + + $spy.affix(data) + }) + }) + + +}(window.jQuery); \ No newline at end of file diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap.min.js b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap.min.js new file mode 100644 index 000000000..af4eef796 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/static/js/bootstrap.min.js @@ -0,0 +1,6 @@ +/** +* Bootstrap.js v2.3.2 by @fat & @mdo +* Copyright 2012 Twitter, Inc. +* http://www.apache.org/licenses/LICENSE-2.0.txt +*/ +!function(e){"use strict";e(function(){e.support.transition=function(){var e=function(){var e=document.createElement("bootstrap"),t={WebkitTransition:"webkitTransitionEnd",MozTransition:"transitionend",OTransition:"oTransitionEnd otransitionend",transition:"transitionend"},n;for(n in t)if(e.style[n]!==undefined)return t[n]}();return e&&{end:e}}()})}(window.jQuery),!function(e){"use strict";var t='[data-dismiss="alert"]',n=function(n){e(n).on("click",t,this.close)};n.prototype.close=function(t){function 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Visit us at www.dynarch.com. + * + * This script is distributed under the GNU Lesser General Public License. + * Read the entire license text here: http://www.gnu.org/licenses/lgpl.html + */ + +// Calendar EN language +// Author: Mihai Bazon, +// Encoding: any +// Distributed under the same terms as the calendar itself. +/* End Copyright Notice for Dynarch Date Time Picker */ + +Calendar=function(J,K,H,G){this.activeDiv=null;this.currentDateEl=null;this.getDateStatus=null;this.getDateToolTip=null;this.getDateText=null;this.timeout=null;this.onSelected=H||null;this.onClose=G||null;this.dragging=false;this.hidden=false;this.minYear=1970;this.maxYear=2050;this.dateFormat=Calendar._TT.DEF_DATE_FORMAT;this.ttDateFormat=Calendar._TT.TT_DATE_FORMAT;this.isPopup=true;this.weekNumbers=true;this.firstDayOfWeek=typeof J=="number"?J:Calendar._FD;this.showsOtherMonths=false;this.dateStr=K;this.ar_days=null;this.showsTime=false;this.time24=true;this.yearStep=2;this.hiliteToday=true;this.multiple=null;this.table=null;this.element=null;this.tbody=null;this.firstdayname=null;this.monthsCombo=null;this.yearsCombo=null;this.hilitedMonth=null;this.activeMonth=null;this.hilitedYear=null;this.activeYear=null;this.dateClicked=false;if(typeof Calendar._SDN=="undefined"){if(typeof Calendar._SDN_len=="undefined"){Calendar._SDN_len=3}var L=new Array();for(var I=8;I>0;){L[--I]=Calendar._DN[I].substr(0,Calendar._SDN_len)}Calendar._SDN=L;if(typeof Calendar._SMN_len=="undefined"){Calendar._SMN_len=3}L=new Array();for(var I=12;I>0;){L[--I]=Calendar._MN[I].substr(0,Calendar._SMN_len)}Calendar._SMN=L}};Calendar._C=null;Calendar.is_ie=(/msie/i.test(navigator.userAgent)&&!/opera/i.test(navigator.userAgent));Calendar.is_ie5=(Calendar.is_ie&&/msie 5\.0/i.test(navigator.userAgent));Calendar.is_opera=/opera/i.test(navigator.userAgent);Calendar.is_khtml=/Konqueror|Safari|KHTML/i.test(navigator.userAgent);Calendar.getAbsolutePos=function(I){var G=0,J=0;var K=/^div$/i.test(I.tagName);if(K&&I.scrollLeft){G=I.scrollLeft}if(K&&I.scrollTop){J=I.scrollTop}var H={x:I.offsetLeft-G,y:I.offsetTop-J};if(I.offsetParent){var L=this.getAbsolutePos(I.offsetParent);H.x+=L.x;H.y+=L.y}return H};Calendar.isRelated=function(G,E){var F=E.relatedTarget;if(!F){var H=E.type;if(H=="mouseover"){F=E.fromElement}else{if(H=="mouseout"){F=E.toElement}}}while(F){if(F==G){return true}F=F.parentNode}return false};Calendar.removeClass=function(G,H){if(!(G&&G.className)){return }var F=G.className.split(" ");var J=new Array();for(var I=F.length;I>0;){if(F[--I]!=H){J[J.length]=F[I]}}G.className=J.join(" ")};Calendar.addClass=function(D,C){Calendar.removeClass(D,C);D.className+=" "+C};Calendar.getElement=function(C){var D=Calendar.is_ie?window.event.srcElement:C.currentTarget;while(D.nodeType!=1||/^div$/i.test(D.tagName)){D=D.parentNode}return D};Calendar.getTargetElement=function(C){var D=Calendar.is_ie?window.event.srcElement:C.target;while(D.nodeType!=1){D=D.parentNode}return D};Calendar.stopEvent=function(B){B||(B=window.event);if(Calendar.is_ie){B.cancelBubble=true;B.returnValue=false}else{B.preventDefault();B.stopPropagation()}return false};Calendar.addEvent=function(D,E,F){if(D.attachEvent){D.attachEvent("on"+E,F)}else{if(D.addEventListener){D.addEventListener(E,F,true)}else{D["on"+E]=F}}};Calendar.removeEvent=function(D,E,F){if(D.detachEvent){D.detachEvent("on"+E,F)}else{if(D.removeEventListener){D.removeEventListener(E,F,true)}else{D["on"+E]=null}}};Calendar.createElement=function(E,F){var D=null;if(document.createElementNS){D=document.createElementNS("http://www.w3.org/1999/xhtml",E)}else{D=document.createElement(E)}if(typeof F!="undefined"){F.appendChild(D)}return 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G=J.offsetWidth;if(typeof G=="undefined"){G=50}L.left=(H.offsetLeft+H.offsetWidth-G)+"px"}L.top=(H.offsetTop+H.offsetHeight)+"px"};Calendar.showYearsCombo=function(K){var N=Calendar._C;if(!N){return false}var N=N;var L=N.activeDiv;var S=N.yearsCombo;if(N.hilitedYear){Calendar.removeClass(N.hilitedYear,"hilite")}if(N.activeYear){Calendar.removeClass(N.activeYear,"active")}N.activeYear=null;var M=N.date.getFullYear()+(K?1:-1);var P=S.firstChild;var Q=false;for(var T=12;T>0;--T){if(M>=N.minYear&&M<=N.maxYear){P.innerHTML=M;P.year=M;P.style.display="block";Q=true}else{P.style.display="none"}P=P.nextSibling;M+=K?N.yearStep:-N.yearStep}if(Q){var O=S.style;O.display="block";if(L.navtype<0){O.left=L.offsetLeft+"px"}else{var R=S.offsetWidth;if(typeof R=="undefined"){R=50}O.left=(L.offsetLeft+L.offsetWidth-R)+"px"}O.top=(L.offsetTop+L.offsetHeight)+"px"}};Calendar.tableMouseUp=function(ev){var cal=Calendar._C;if(!cal){return false}if(cal.timeout){clearTimeout(cal.timeout)}var el=cal.activeDiv;if(!el){return false}var target=Calendar.getTargetElement(ev);ev||(ev=window.event);Calendar.removeClass(el,"active");if(target==el||target.parentNode==el){Calendar.cellClick(el,ev)}var mon=Calendar.findMonth(target);var date=null;if(mon){date=new Date(cal.date);if(mon.month!=date.getMonth()){date.setMonth(mon.month);cal.setDate(date);cal.dateClicked=false;cal.callHandler()}}else{var year=Calendar.findYear(target);if(year){date=new Date(cal.date);if(year.year!=date.getFullYear()){date.c_setFullYear(year.year);cal.setDate(date);cal.dateClicked=false;cal.callHandler()}}}with(Calendar){removeEvent(document,"mouseup",tableMouseUp);removeEvent(document,"mouseover",tableMouseOver);removeEvent(document,"mousemove",tableMouseOver);cal._hideCombos();_C=null;return stopEvent(ev)}};Calendar.tableMouseOver=function(X){var T=Calendar._C;if(!T){return }var R=T.activeDiv;var b=Calendar.getTargetElement(X);if(b==R||b.parentNode==R){Calendar.addClass(R,"hilite 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a=Calendar.findYear(b);if(a){if(a.year!=T.date.getFullYear()){if(T.hilitedYear){Calendar.removeClass(T.hilitedYear,"hilite")}Calendar.addClass(a,"hilite");T.hilitedYear=a}else{if(T.hilitedYear){Calendar.removeClass(T.hilitedYear,"hilite")}}}else{if(T.hilitedYear){Calendar.removeClass(T.hilitedYear,"hilite")}}}return Calendar.stopEvent(X)};Calendar.tableMouseDown=function(B){if(Calendar.getTargetElement(B)==Calendar.getElement(B)){return Calendar.stopEvent(B)}};Calendar.calDragIt=function(J){var I=Calendar._C;if(!(I&&I.dragging)){return false}var G;var H;if(Calendar.is_ie){H=window.event.clientY+document.body.scrollTop;G=window.event.clientX+document.body.scrollLeft}else{G=J.pageX;H=J.pageY}I.hideShowCovered();var F=I.element.style;F.left=(G-I.xOffs)+"px";F.top=(H-I.yOffs)+"px";return Calendar.stopEvent(J)};Calendar.calDragEnd=function(ev){var cal=Calendar._C;if(!cal){return 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Calendar.stopEvent(ev)};Calendar.dayMouseDblClick=function(B){Calendar.cellClick(Calendar.getElement(B),B||window.event);if(Calendar.is_ie){document.selection.empty()}};Calendar.dayMouseOver=function(D){var C=Calendar.getElement(D);if(Calendar.isRelated(C,D)||Calendar._C||C.disabled){return false}if(C.ttip){if(C.ttip.substr(0,1)=="_"){C.ttip=C.caldate.c_print(C.calendar.ttDateFormat)+C.ttip.substr(1)}C.calendar.tooltips.innerHTML=C.ttip}if(C.navtype!=300){Calendar.addClass(C,"hilite");if(C.caldate){Calendar.addClass(C.parentNode,"rowhilite")}}return Calendar.stopEvent(D)};Calendar.dayMouseOut=function(ev){with(Calendar){var el=getElement(ev);if(isRelated(el,ev)||_C||el.disabled){return false}removeClass(el,"hilite");if(el.caldate){removeClass(el.parentNode,"rowhilite")}if(el.calendar){el.calendar.tooltips.innerHTML=_TT.SEL_DATE}return stopEvent(ev)}};Calendar.cellClick=function(d,U){var Q=d.calendar;var a=false;var X=false;var c=null;if(typeof 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V=Calendar.createElement("table");this.table=V;V.cellSpacing=0;V.cellPadding=0;V.calendar=this;Calendar.addEvent(V,"mousedown",Calendar.tableMouseDown);var T=Calendar.createElement("div");this.element=T;T.className="calendar";if(this.isPopup){T.style.position="absolute";T.style.display="none"}T.appendChild(V);var b=Calendar.createElement("thead",V);var X=null;var U=null;var S=this;var f=function(A,B,C){X=Calendar.createElement("td",U);X.colSpan=B;X.className="button";if(C!=0&&Math.abs(C)<=2){X.className+=" nav"}Calendar._add_evs(X);X.calendar=S;X.navtype=C;X.innerHTML="
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c=7;c>0;--c){X=Calendar.createElement("td",U);if(!c){X.navtype=100;X.calendar=this;Calendar._add_evs(X)}}this.firstdayname=(this.weekNumbers)?U.firstChild.nextSibling:U.firstChild;this._displayWeekdays();var d=Calendar.createElement("tbody",V);this.tbody=d;for(c=6;c>0;--c){U=Calendar.createElement("tr",d);if(this.weekNumbers){X=Calendar.createElement("td",U)}for(var e=7;e>0;--e){X=Calendar.createElement("td",U);X.calendar=this;Calendar._add_evs(X)}}if(this.showsTime){U=Calendar.createElement("tr",d);U.className="time";X=Calendar.createElement("td",U);X.className="time";X.colSpan=2;X.innerHTML=Calendar._TT.TIME||" ";X=Calendar.createElement("td",U);X.className="time";X.colSpan=this.weekNumbers?4:3;(function(){function F(P,N,O,L){var K=Calendar.createElement("span",X);K.className=P;K.innerHTML=N;K.calendar=S;K.ttip=Calendar._TT.TIME_PART;K.navtype=50;K._range=[];if(typeof O!="number"){K._range=O}else{for(var J=O;J<=L;++J){var M;if(J<10&&L>=10){M="0"+J}else{M=""+J}K._range[K._range.length]=M}}Calendar._add_evs(K);return K}var B=S.date.getHours();var I=S.date.getMinutes();var A=!S.time24;var H=(B>12);if(A&&H){B-=12}var D=F("hour",B,A?1:0,A?12:23);var E=Calendar.createElement("span",X);E.innerHTML=":";E.className="colon";var G=F("minute",I,0,59);var C=null;X=Calendar.createElement("td",U);X.className="time";X.colSpan=2;if(A){C=F("ampm",H?"pm":"am",["am","pm"])}else{X.innerHTML=" "}S.onSetTime=function(){var K,L=this.date.getHours(),J=this.date.getMinutes();if(A){K=(L>=12);if(K){L-=12}if(L==0){L=12}C.innerHTML=K?"pm":"am"}D.innerHTML=(L<10)?("0"+L):L;G.innerHTML=(J<10)?("0"+J):J};S.onUpdateTime=function(){var K=this.date;var J=parseInt(D.innerHTML,10);if(A){if(/pm/i.test(C.innerHTML)&&J<12){J+=12}else{if(/am/i.test(C.innerHTML)&&J==12){J=0}}}var N=K.getDate();var M=K.getMonth();var L=K.getFullYear();K.setHours(J);K.setMinutes(parseInt(G.innerHTML,10));K.c_setFullYear(L);K.setMonth(M);K.setDate(N);this.dateClicked=false;this.callHandler()}})()}else{this.onSetTime=this.onUpdateTime=function(){}}var a=Calendar.createElement("tfoot",V);U=Calendar.createElement("tr",a);U.className="footrow";X=f(Calendar._TT.SEL_DATE,this.weekNumbers?8:7,300);X.className="ttip";if(this.isPopup){X.ttip=Calendar._TT.DRAG_TO_MOVE;X.style.cursor="move"}this.tooltips=X;T=Calendar.createElement("div",this.element);this.monthsCombo=T;T.className="combo";for(c=0;c0;--c){var W=Calendar.createElement("div");W.className=Calendar.is_ie?"label-IEfix":"label";T.appendChild(W)}this._init(this.firstDayOfWeek,this.date);Z.appendChild(this.element)};Calendar._keyEvent=function(T){var Q=window._dynarch_popupCalendar;if(!Q||Q.multiple){return false}(Calendar.is_ie)&&(T=window.event);var V=(Calendar.is_ie||T.type=="keypress"),S=T.keyCode;if(T.ctrlKey){switch(S){case 37:V&&Calendar.cellClick(Q._nav_pm);break;case 38:V&&Calendar.cellClick(Q._nav_py);break;case 39:V&&Calendar.cellClick(Q._nav_nm);break;case 40:V&&Calendar.cellClick(Q._nav_ny);break;default:return false}}else{switch(S){case 32:Calendar.cellClick(Q._nav_now);break;case 27:V&&Q.callCloseHandler();break;case 37:case 38:case 39:case 40:if(V){var Z,R,U,X,O,K;Z=S==37||S==38;K=(S==37||S==39)?1:7;function P(){O=Q.currentDateEl;var A=O.pos;R=A&15;U=A>>4;X=Q.ar_days[U][R]}P();function Y(){var A=new Date(Q.date);A.setDate(A.getDate()-K);Q.setDate(A)}function W(){var A=new Date(Q.date);A.setDate(A.getDate()+K);Q.setDate(A)}while(1){switch(S){case 37:if(--R>=0){X=Q.ar_days[U][R]}else{R=6;S=38;continue}break;case 38:if(--U>=0){X=Q.ar_days[U][R]}else{Y();P()}break;case 39:if(++R<7){X=Q.ar_days[U][R]}else{R=0;S=40;continue}break;case 40:if(++Uthis.maxYear){v=this.maxYear;e.c_setFullYear(v)}}this.firstDayOfWeek=q;this.date=new Date(e);var d=e.getMonth();var a=e.getDate();var b=e.c_getMonthDays();e.setDate(1);var k=(e.getDay()-this.firstDayOfWeek)%7;if(k<0){k+=7}e.setDate(0-k);e.setDate(e.getDate()+1);var y=this.tbody.firstChild;var s=Calendar._SMN[d];var o=this.ar_days=new Array();var p=Calendar._TT.WEEKEND;var z=this.multiple?(this.datesCells={}):null;for(var i=0;i<6;++i,y=y.nextSibling){var AC=y.firstChild;if(this.weekNumbers){AC.className="day wn";AC.innerHTML=e.c_getWeekNumber();AC=AC.nextSibling}y.className="daysrow";var g=false,x,AA=o[i]=[];for(var j=0;j<7;++j,AC=AC.nextSibling,e.setDate(x+1)){x=e.getDate();var w=e.getDay();AC.className="day";AC.pos=i<<4|j;AA[j]=AC;var r=(e.getMonth()==d);if(!r){if(this.showsOtherMonths){AC.className+=" othermonth";AC.otherMonth=true}else{AC.className="emptycell";AC.innerHTML=" ";AC.disabled=true;continue}}else{AC.otherMonth=false;g=true}AC.disabled=false;AC.innerHTML=this.getDateText?this.getDateText(e,x):x;if(z){z[e.c_print("%Y%m%d")]=AC}if(this.getDateStatus){var n=this.getDateStatus(e,v,d,x);if(this.getDateToolTip){var u=this.getDateToolTip(e,v,d,x);if(u){AC.title=u}}if(n===true){AC.className+=" disabled";AC.disabled=true}else{if(/disabled/i.test(n)){AC.disabled=true}AC.className+=" "+n}}if(!AC.disabled){AC.caldate=new Date(e);AC.ttip="_";if(!this.multiple&&r&&x==a&&this.hiliteToday){AC.className+=" selected";this.currentDateEl=AC}if(e.getFullYear()==l&&e.getMonth()==c&&x==AB){AC.className+=" today";AC.ttip+=Calendar._TT.PART_TODAY}if(p.indexOf(w.toString())!=-1){AC.className+=AC.otherMonth?" oweekend":" weekend"}}}if(!(g||this.showsOtherMonths)){y.className="emptyrow"}}this.title.innerHTML=Calendar._MN[d]+", "+v;this.onSetTime();this.table.style.visibility="visible";this._initMultipleDates()};Calendar.prototype._initMultipleDates=function(){if(this.multiple){for(var F in this.multiple){var D=this.datesCells[F];var E=this.multiple[F];if(!E){continue}if(D){D.className+=" selected"}}}};Calendar.prototype._toggleMultipleDate=function(H){if(this.multiple){var G=H.c_print("%Y%m%d");var E=this.datesCells[G];if(E){var F=this.multiple[G];if(!F){Calendar.addClass(E,"selected");this.multiple[G]=H}else{Calendar.removeClass(E,"selected");delete this.multiple[G]}}}};Calendar.prototype.setDateToolTipHandler=function(B){this.getDateToolTip=B};Calendar.prototype.setDate=function(B){if(!B.c_equalsTo(this.date)){this._init(this.firstDayOfWeek,B)}};Calendar.prototype.refresh=function(){this._init(this.firstDayOfWeek,this.date)};Calendar.prototype.setFirstDayOfWeek=function(B){this._init(B,this.date);this._displayWeekdays()};Calendar.prototype.setDateStatusHandler=Calendar.prototype.setDisabledHandler=function(B){this.getDateStatus=B};Calendar.prototype.setRange=function(C,D){this.minYear=C;this.maxYear=D};Calendar.prototype.callHandler=function(){if(this.onSelected){this.onSelected(this,this.date.c_print(this.dateFormat))}};Calendar.prototype.callCloseHandler=function(){if(this.onClose){this.onClose(this)}this.hideShowCovered()};Calendar.prototype.destroy=function(){var B=this.element.parentNode;B.removeChild(this.element);Calendar._C=null;window._dynarch_popupCalendar=null};Calendar.prototype.reparent=function(D){var C=this.element;C.parentNode.removeChild(C);D.appendChild(C)};Calendar._checkCalendar=function(F){var E=window._dynarch_popupCalendar;if(!E){return false}var D=Calendar.is_ie?Calendar.getElement(F):Calendar.getTargetElement(F);for(;D!=null&&D!=E.element;D=D.parentNode){}if(D==null){window._dynarch_popupCalendar.callCloseHandler();return Calendar.stopEvent(F)}};Calendar.prototype.show=function(){var I=this.table.getElementsByTagName("tr");for(var J=I.length;J>0;){var H=I[--J];Calendar.removeClass(H,"rowhilite");var K=H.getElementsByTagName("td");for(var L=K.length;L>0;){var G=K[--L];Calendar.removeClass(G,"hilite");Calendar.removeClass(G,"active")}}this.element.style.display="block";this.hidden=false;if(this.isPopup){window._dynarch_popupCalendar=this;Calendar.addEvent(document,"keydown",Calendar._keyEvent);Calendar.addEvent(document,"keypress",Calendar._keyEvent);Calendar.addEvent(document,"mousedown",Calendar._checkCalendar)}this.hideShowCovered()};Calendar.prototype.hide=function(){if(this.isPopup){Calendar.removeEvent(document,"keydown",Calendar._keyEvent);Calendar.removeEvent(document,"keypress",Calendar._keyEvent);Calendar.removeEvent(document,"mousedown",Calendar._checkCalendar)}this.element.style.display="none";this.hidden=true;this.hideShowCovered()};Calendar.prototype.showAt=function(D,E){var F=this.element.style;F.left=D+"px";F.top=E+"px";this.show()};Calendar.prototype.showAtElement=function(I,H){var F=this;var G=Calendar.getAbsolutePos(I);if(!H||typeof H!="string"){this.showAt(G.x,G.y+I.offsetHeight);return true}function J(B){if(B.x<0){B.x=0}if(B.y<0){B.y=0}var A=document.createElement("div");var C=A.style;C.position="absolute";C.right=C.bottom=C.width=C.height="0px";document.body.appendChild(A);var D=Calendar.getAbsolutePos(A);document.body.removeChild(A);if(Calendar.is_ie){D.y+=document.body.scrollTop;D.x+=document.body.scrollLeft}else{D.y+=window.scrollY;D.x+=window.scrollX}var E=B.x+B.width-D.x;if(E>0){B.x-=E}E=B.y+B.height-D.y;if(E>0){B.y-=E}}this.element.style.display="block";Calendar.continuation_for_the_fucking_khtml_browser=function(){var D=F.element.offsetWidth;var B=F.element.offsetHeight;F.element.style.display="none";var C=H.substr(0,1);var A="l";if(H.length>1){A=H.substr(1,1)}switch(C){case"T":G.y-=B;break;case"B":G.y+=I.offsetHeight;break;case"C":G.y+=(I.offsetHeight-B)/2;break;case"t":G.y+=I.offsetHeight-B;break;case"b":break}switch(A){case"L":G.x-=D;break;case"R":G.x+=I.offsetWidth;break;case"C":G.x+=(I.offsetWidth-D)/2;break;case"l":G.x+=I.offsetWidth-D;break;case"r":break}G.width=D;G.height=B+40;F.monthsCombo.style.display="none";J(G);F.showAt(G.x,G.y)};if(Calendar.is_khtml){setTimeout("Calendar.continuation_for_the_fucking_khtml_browser()",10)}else{Calendar.continuation_for_the_fucking_khtml_browser()}};Calendar.prototype.setDateFormat=function(B){this.dateFormat=B};Calendar.prototype.setTtDateFormat=function(B){this.ttDateFormat=B};Calendar.prototype.parseDate=function(D,C){if(!C){C=this.dateFormat}this.setDate(Date.parseDate(D,C))};Calendar.prototype.hideShowCovered=function(){if(!Calendar.is_ie&&!Calendar.is_opera){return }function S(A){var B=A.style.visibility;if(!B){if(document.defaultView&&typeof (document.defaultView.getComputedStyle)=="function"){if(!Calendar.is_khtml){B=document.defaultView.getComputedStyle(A,"").getPropertyValue("visibility")}else{B=""}}else{if(A.currentStyle){B=A.currentStyle.visibility}else{B=""}}}return B}var U=new Array("applet","iframe","select");var R=this.element;var T=Calendar.getAbsolutePos(R);var e=T.x;var Q=R.offsetWidth+e;var V=T.y;var W=R.offsetHeight+V;for(var c=U.length;c>0;){var d=document.getElementsByTagName(U[--c]);var f=null;for(var a=d.length;a>0;){f=d[--a];T=Calendar.getAbsolutePos(f);var X=T.x;var Y=f.offsetWidth+X;var Z=T.y;var b=f.offsetHeight+Z;if(this.hidden||(X>Q)||(YW)||(b29)?1900:2000);break;case"%b":case"%B":for(N=0;N<12;++N){if(Calendar._MN[N].substr(0,T[Z].length).toLowerCase()==T[Z].toLowerCase()){P=N;break}}break;case"%H":case"%I":case"%k":case"%l":S=parseInt(T[Z],10);break;case"%P":case"%p":if(/pm/i.test(T[Z])&&S<12){S+=12}else{if(/am/i.test(T[Z])&&S>=12){S-=12}}break;case"%M":O=parseInt(T[Z],10);break}}if(isNaN(V)){V=W.getFullYear()}if(isNaN(P)){P=W.getMonth()}if(isNaN(Y)){Y=W.getDate()}if(isNaN(S)){S=W.getHours()}if(isNaN(O)){O=W.getMinutes()}if(V!=0&&P!=-1&&Y!=0){return new Date(V,P,Y,S,O,0)}V=0;P=-1;Y=0;for(Z=0;Z31&&V==0){V=parseInt(T[Z],10);(V<100)&&(V+=(V>29)?1900:2000)}else{if(Y==0){Y=T[Z]}}}}}if(V==0){V=W.getFullYear()}if(P!=-1&&Y!=0){return new Date(V,P,Y,S,O,0)}return W};Date.prototype.c_getMonthDays=function(D){var C=this.getFullYear();if(typeof D=="undefined"){D=this.getMonth()}if(((0==(C%4))&&((0!=(C%100))||(0==(C%400))))&&D==1){return 29}else{return Date._MD[D]}};Date.prototype.c_getDayOfYear=function(){var D=new Date(this.getFullYear(),this.getMonth(),this.getDate(),0,0,0);var E=new Date(this.getFullYear(),0,0,0,0,0);var F=D-E;return Math.floor(F/Date.DAY)};Date.prototype.c_getWeekNumber=function(){var E=new Date(this.getFullYear(),this.getMonth(),this.getDate(),0,0,0);var F=E.getDay();E.setDate(E.getDate()-(F+6)%7+3);var D=E.valueOf();E.setMonth(0);E.setDate(4);return Math.round((D-E.valueOf())/(7*86400000))+1};Date.prototype.c_equalsTo=function(B){return((this.getFullYear()==B.getFullYear())&&(this.getMonth()==B.getMonth())&&(this.getDate()==B.getDate())&&(this.getHours()==B.getHours())&&(this.getMinutes()==B.getMinutes()))};Date.prototype.c_setDateOnly=function(C){var D=new Date(C);this.setDate(1);this.c_setFullYear(D.getFullYear());this.setMonth(D.getMonth());this.setDate(D.getDate())};Date.prototype.c_print=function(d){var U=this.getMonth();var e=this.getDate();var c=this.getFullYear();var a=this.c_getWeekNumber();var Z=this.getDay();var V={};var Y=this.getHours();var T=(Y>=12);var g=(T)?(Y-12):Y;var W=this.c_getDayOfYear();if(g==0){g=12}var S=this.getMinutes();var f=this.getSeconds();V["%a"]=Calendar._SDN[Z];V["%A"]=Calendar._DN[Z];V["%b"]=Calendar._SMN[U];V["%B"]=Calendar._MN[U];V["%C"]=1+Math.floor(c/100);V["%d"]=(e<10)?("0"+e):e;V["%e"]=e;V["%H"]=(Y<10)?("0"+Y):Y;V["%I"]=(g<10)?("0"+g):g;V["%j"]=(W<100)?((W<10)?("00"+W):("0"+W)):W;V["%k"]=Y;V["%l"]=g;V["%m"]=(U<9)?("0"+(1+U)):(1+U);V["%M"]=(S<10)?("0"+S):S;V["%n"]="\n";V["%p"]=T?"PM":"AM";V["%P"]=T?"pm":"am";V["%s"]=Math.floor(this.getTime()/1000);V["%S"]=(f<10)?("0"+f):f;V["%t"]="\t";V["%U"]=V["%W"]=V["%V"]=(a<10)?("0"+a):a;V["%u"]=Z+1;V["%w"]=Z;V["%y"]=(""+c).substr(2,2);V["%Y"]=c;V["%%"]="%";var X=/%./g;if(!Calendar.is_ie5&&!Calendar.is_khtml){return d.replace(X,function(A){return V[A]||A})}var b=d.match(X);for(var i=0;i=0;){var G=I.multiple[D];var B=G.c_print("%Y%m%d");A.multiple[B]=G}}A.showsOtherMonths=I.showOthers;A.yearStep=I.step;A.setRange(I.range[0],I.range[1]);A.params=I;A.setDateStatusHandler(I.dateStatusFunc);A.getDateText=I.dateText;A.setDateFormat(C);if(F){A.create()}A.refresh();if(!I.position){A.showAtElement(I.button||I.displayArea||I.inputField,I.align)}else{A.showAt(I.position[0],I.position[1])}return false};return K}; + +/* + http://keith-wood.name/timeEntry.html + Time entry for jQuery v1.4.8. + Written by Keith Wood (kbwood{at}iinet.com.au) June 2007. + Minor changes by Massimo Di Pierro Nov 2010 (simplified and changed behavior) + Dual licensed under the GPL (http://dev.jquery.com/browser/trunk/jquery/GPL-LICENSE.txt) and + MIT (http://dev.jquery.com/browser/trunk/jquery/MIT-LICENSE.txt) licenses. + Please attribute the author if you use it. + + Turn an input field into an entry point for a time value. + The time can be entered via directly typing the value, + via the arrow keys. + It is configurable to show 12 or 24-hour time, to show or hide seconds, + to enforce a minimum and/or maximum time, to change the spinner image. + + Example: jQuery('input.time').timeEntry(); +*/ + +(function(a){var d=12,k="ampmNames",i="show24Hours",m="showSeconds",l="character",b=10,f=false,j="string",e=-1,c=null,h=true,g="timeEntry";function o(){this._disabledInputs=[];this._defaults={showSeconds:h,defaultTime:c,minTime:c,maxTime:c,show24Hours:h,ampmNames:["am","pm"]};a.extend(this._defaults)}a.extend(o.prototype,{markerClassName:"hasTimeEntry",setDefaults:function(a){n(this._defaults,a||{});return this},_connectTimeEntry:function(e,f){var c=this,d=a(e);if(d.hasClass(c.markerClassName))return;var b={};b.options=a.extend({},f);b._selectedHour=0;b._selectedMinute=0;b._selectedSecond=0;b._field=0;b.input=a(e);a.data(e,g,b);d.addClass(c.markerClassName).bind("focus.timeEntry",c._doFocus).bind("blur.timeEntry",c._doBlur).bind("click.timeEntry",c._doClick).bind("keydown.timeEntry",c._doKeyDown).bind("keypress.timeEntry",c._doKeyPress);a.browser.mozilla&&d.bind("input.timeEntry",function(){a.timeEntry._parseTime(b)});a.browser.msie&&d.bind("paste.timeEntry",function(){setTimeout(function(){a.timeEntry._parseTime(b)},1)})},_isDisabledTimeEntry:function(b){return a.inArray(b,this._disabledInputs)>e},_changeTimeEntry:function(e,b,f){var c=a.data(e,g);if(c){if(typeof b==j){var h=b;b={};b[h]=f}var d=this._extractTime(c);n(c.options,b||{});d&&this._setTime(c,new Date(0,0,0,d[0],d[1],d[2]))}a.data(e,g,c)},_destroyTimeEntry:function(d){var 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r?Math.max(0,r[1]-(n||0))+(r[2]||"px"):t}function an(e,t,n,r,i){var o=n===(r?"border":"content")?4:"width"===t?1:0,a=0;for(;4>o;o+=2)"margin"===n&&(a+=b.css(e,n+Zt[o],!0,i)),r?("content"===n&&(a-=b.css(e,"padding"+Zt[o],!0,i)),"margin"!==n&&(a-=b.css(e,"border"+Zt[o]+"Width",!0,i))):(a+=b.css(e,"padding"+Zt[o],!0,i),"padding"!==n&&(a+=b.css(e,"border"+Zt[o]+"Width",!0,i)));return a}function sn(e,t,n){var r=!0,i="width"===t?e.offsetWidth:e.offsetHeight,o=Rt(e),a=b.support.boxSizing&&"border-box"===b.css(e,"boxSizing",!1,o);if(0>=i||null==i){if(i=Wt(e,t,o),(0>i||null==i)&&(i=e.style[t]),Yt.test(i))return i;r=a&&(b.support.boxSizingReliable||i===e.style[t]),i=parseFloat(i)||0}return i+an(e,t,n||(a?"border":"content"),r,o)+"px"}function un(e){var t=o,n=Gt[e];return n||(n=ln(e,t),"none"!==n&&n||(Pt=(Pt||b(" + + +{{ if get_domain_banner_text(request): }} +
            {{= get_domain_banner_text(request) }}
            +

            {{= XML(get_domain_banner_hovertext(request)) }}

            +{{ pass }} + + +
            +
            + {{if left_sidebar_enabled:}} +
            +
            + +
            + {{block left_sidebar}} +

            Left Sidebar

            +

            + {{end}} +
            + {{pass}} + +
            + {{block center}} + {{include}} + {{end}} +
            + + {{if right_sidebar_enabled:}} +
            + {{block right_sidebar}} +

            Right Sidebar

            +

            + {{end}} +
            + {{pass}} +
            + +
            + +{{ if 'nudgingToLatestSyntheticTree' in locals(): }} + {{ if nudgingToLatestSyntheticTree: }} +
            + Note: The requested synthetic tree version ('{{= incomingDomSource}}') is no longer available. + This view reflects the latest version + ({{= draftTreeName}}). + + +
            + {{ pass }} +{{ pass }} + + +
            +
            +
            + {{block footer}} +
            + {{=T('Open Tree of Life is funded by NSF (AVAToL)')}} +
            +
            + Show/hide server details + • + License information + • + {{=T('Powered by')}} + web2py +
            + + {{end}} +
            +
            +
            + + + + + + + + + + From a492c38c7b05d361d3ff2895a7d7ca6846600a37 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Sat, 17 Sep 2022 02:13:19 -0400 Subject: [PATCH 08/86] More jinja template cleanup --- .../templates/layout.jinja2 | 135 +++++++++--------- 1 file changed, 68 insertions(+), 67 deletions(-) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 b/synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 index 7f252ef1a..252aaeaf2 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/layout.jinja2 @@ -1,9 +1,14 @@ -{{ -from applications.opentree.modules.opentreewebapputil import get_user_display_name, get_conf, get_domain_banner_text, get_domain_banner_hovertext, get_currently_deployed_opentree_branch, latest_CrossRef_URL -}} +{% +from applications.opentree.modules.opentreewebapputil import get_user_display_name, + get_conf, + get_domain_banner_text, + get_domain_banner_hovertext, + get_currently_deployed_opentree_branch, + latest_CrossRef_URL +%} - + @@ -28,7 +33,7 @@ from applications.opentree.modules.opentreewebapputil import get_user_display_na - {{=response.title or request.application}} + {{ response.title or request.application}} {{response.files.append(URL('static','css/bootstrap.css'))}} {{response.files.append(URL('static','css/bootstrap-responsive.css'))}} + +
            +

            Materials and methods

            + +
            +
            + +

            + TODO: What else goes here? Lorem ipsum dolor sit amet, + consectetur adipiscing elit. In bibendum, magna et viverra + tincidunt, nisi leo dapibus massa, sit amet fermentum dui magna a + nunc. Maecenas a ligula libero. Cras id tempus dui. +

            +

            + Nam at vehicula augue. Vestibulum varius ligula ante, sit amet + gravida mi semper non. Nunc ornare bibendum ultrices. Ut nec + porttitor enim. Vivamus luctus semper risus, ac imperdiet ante + pulvinar in. +

            +

            + Vivamus urna lectus, rutrum nec odio ac, ullamcorper sagittis + dolor. Sed lacinia dolor a mauris mollis cursus. Fusce tristique + dictum luctus. Vestibulum ante ipsum primis in faucibus orci + luctus et ultrices posuere cubilia Curae; Nam arcu nisi, pharetra + at felis et, condimentum bibendum tellus. In vitae ante ut elit + mollis auctor sed a tortor. +

            +
            + +
            + +

            Comments

            + {{=plugin_localcomments(filter='url',url=request.url)}} + +
            + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/open_tree_of_life.jinja2 b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/open_tree_of_life.jinja2 new file mode 100644 index 000000000..4a0925f42 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/open_tree_of_life.jinja2 @@ -0,0 +1,152 @@ +{% extends "../layout.jinja2" %} + +{% block center %} +
            +

            Open Tree of Life

            + +
            +
            +

            + Open Tree of Life aims to construct a comprehensive, dynamic and digitally-available tree of life by synthesizing published phylogenetic trees along with taxonomic data. The project is a collaborative effort between 11 PIs across 10 institutions. Funded by NSF ABI #1759838, NSF AVAToL #1208809. More information and tutorials at opentreeoflife.org +

            +

            + Browse the tree and leave feedback: Click on nodes to move through the tree, and click on nodes or edges to see more information about taxonomies and phylogenies that contain / support that node. If you have feedback about the relationships that you see, use the "Add Comment" button. +

            +

            + Contribute data: You can contribute to the synthetic tree by uploading trees through our curation interface. These can be trees from TreeBASE or trees uploaded from your computer. There will be a delay before uploaded trees appear in the synthetic tree. Up to summer 2015, the release cycle has been months between new versions of the synthetic tree, but this should shorten in the future. +

            +

            Contact us using one of the methods on the Contact page. +

            +

            Cite the Open Tree Synthetic Tree (please include current synthesis release): + OpenTree et al. "Open Tree of Life Synthetic Tree" + https://doi.org/10.5281/zenodo.3937741

            +

            Cite the Open Tree Taxonomy (please include current taxonomy version): + OpenTree et al. "Open Tree of Life Taxonomy" + https://doi.org/10.5281/zenodo.3937750

            +

            Cite the Open Tree Synthesis Algorithim: + Redelings BD, Holder MT. "A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species." PeerJ. 2017;5:e3058. + https://doi.org/10.7717/peerj.3058

            +

            Cite the Open Tree Taxonomy: + Rees J, Cranston K (2017) "Automated assembly of a reference taxonomy for phylogenetic data synthesis." + Biodiversity Data Journal 5: e12581. + https://doi.org/10.3897/BDJ.5.e12581

            +

            Cite the Open Tree DataStore: + McTavish EJ, Hinchliff CE, Allman JF, Brown JW, Cranston KA, Holder MT, et al. Phylesystem: a git-based data store for community curated phylogenetic estimates. Bioinformatics. 2015;31:2794–800. + https://doi.org/10.1093/bioinformatics/btv276

            +
            +
            +
            +
            + Sustaining the Open Tree of Life, NSF ABI #1759838; ABI #1759846 (2018-2022) +
            +
            +
            +
            +
            +
            Postdocs & students
            +
            Ben Redelings
            +
            Luna Luisa Sanchez Reyes
            +
            +
            +
            +
            +
            Developers
            +
            Jim Allman
            +
            Karen Cranston
            +
            Mark Holder
            +
            Emily Jane McTavish
            +
            Ben Redelings
            +
            Luna Luisa Sanchez Reyes
            + +
            +
            +
            +
            +
            Principal investigators
            +
            Karen Cranston
            +
            Mark Holder
            +
            Emily Jane McTavish
            +
            +
            +
            +
            +
            + Open Tree of Life, NSF AVAToL #1208809 (2012-2016) +
            +
            +
            +
            +
            +
            Postdocs & students
            +
            Joseph Brown
            +
            Ruchi Chaudhary
            +
            Lyndon M. Coghill
            +
            Jiabin Deng
            +
            Bryan Drew
            +
            Romina Gazis
            +
            Jessica Grant
            +
            Cody Hinchliff
            +
            Dail Laughinghouse
            +
            Emily Jane McTavish
            +
            Chris Owen
            +
            Ben Redelings
            + + + +
            +
            +
            +
            +
            Developers
            +
            Jim Allman
            +
            Joseph Brown
            +
            Karen Cranston
            +
            Cody Hinchliff
            +
            Mark Holder
            +
            Jonathan Leto
            +
            Emily Jane McTavish
            +
            Peter Midford
            +
            Ben Redelings
            +
            Richard Ree
            +
            Jonathan Rees
            +
            Stephen Smith
            +
            +
            +
            +
            +
            Principal investigators
            +
            Gordon Burleigh
            +
            Keith Crandall
            +
            Karen Cranston
            +
            Karl Gude
            +
            David Hibbett
            +
            Mark Holder
            +
            Laura Katz
            +
            Richard Ree
            +
            Stephen Smith
            +
            Doug Soltis
            +
            Tiffani Williams
            + + +
            +
            +
            + +

            Comments

            + {# plugin_localcomments(filter='url',url=request.url) #} + +
            + + +{% endblock center %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.html new file mode 100644 index 000000000..0010865b1 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.html @@ -0,0 +1,156 @@ +{{extend 'layout.html'}} + +
            +

            Privacy Policy

            +
            +
            +

            +The Open Tree of Life project provides infrastructure +to help the community of people interested in evolutionary +relationships to create a synthetic view of published +phylogenetic information. +The website of the project allows user to curate the results of +phylogenetic research via +our curation page. +Users can also comment on current synthetic tree (see instructions on + our "about" page). +

            +

            What kind of user information do we keep?

            +

            Not much, and as little as possible (see the this page for + an explanation of this choice).

            +

            The type of user information stored on our servers depends +on what aspects of the site you are using. Briefly: +

              +
            • You do not need to have an account or any type of registeration to + use our API or + to browse the synthetic tree or + taxonomy.
              • +
            • To maintain provenance of the scientific work involved in curating a study, + we require curators to log in via GitHub (see below).
              • +
            • To leave a comment on the tree, you can either be logged in with a + GitHub account, provide a name and email address (which will be publicly visible), + or enter "Anonymous" in the name field. + Comments are publicly visible on the tree and in our feedback repository. +
              • +
            +We describe below what information is stored for each type of user activity below. +

            + + +

            What information do we keep about users of our APIs?

            +

            IP addresses: + The apache web server software we use writes IP addresses of incoming requests in its log files. +We periodically summarize the counts of calls to different services + based on these logs so that we can better understand what parts of + the project are most widely used. +After that summarization, we delete the log files. +We do not store the IP addresses in them long term. +We do not associate the IP address with any user accounts or user other user information. +We do not distribute any of this IP addresses to any third-parties. +The only form that this information is used or distributed is in summary statistics about + the frequency of usage of our different services. +

            + +

            What information do we keep about non-logged in users browsing the tree?

            +
              +
            1. IP addresses: When you visit our site, your browser users our API. So the information + described in the previous section about IP addresses applies to you.
              2. +
            2. Cookies+Sessions: Our web apps (browsing the synthetic tree and taxonomy) store a single cookie with a +session identifier. This cookie and session store no personal information.
              3. +
            3. Google analytics: We use Google Analytics to gather some basic information about +how users are navigating the site and which features are commonly used. +You can "opt out" of this tracking when you first reach the website. +
              4. +
            + +

            What information do we keep about anonymous comments on the tree?

            +

            +If you want to leave a comment on the synthetic tree, you will be +prompted to log into a GitHub account or to enter your name and email address. +To leave anonymous feedback, enter 'Anonymous' for the name and leave +the email address blank. +

            +
              +
            1. See above: Anonymous commenters are using the site, so the previous sections apply to them.
              2. +
            2. Comments on GitHub: We store the comments in a publicly visible form as an "issue" at + https://github.com/OpenTreeOfLife/feedback/issues/
              3. +
            3. Comments on the tree browser: Open issues will also appear to visitors of the site when they browse to the node + of the tree where the issue was created.
              4. +
            4. Name and email address:If you enter your name and an email address when creating a comment, + the name will appear with a link your email address as the "Author" of the comment.
              5. +
            + + +

            What information do we keep about logged-in users?

            +
              +
            1. See above: The information in "What information do we keep about non-logged in users browsing the tree?" applies to logged-in users
              2. +
            2. GitHub account info: We use GitHub for authentication for data contributors. +This means that the Open Tree of Life project does not store any personal + information about its users. +Our web application can only obtain your name and email address if it is +publicly visible in your GitHub profile. +If you choose not to make that information public, then our application can only + tell what your GitHub username is (and the fact that you have successfully + authenticated with GitHub using that username).
              + We have entered into a Data Protection Agreement with GitHub regarding issues of privacy and personal data. +See GitHub's privacy policy +for their approach to protecting and managing users' personal data. +
              3. +
            + + +

            What information do we keep about study curators?

            +

            +The study curation app handle much more data than the commenting feature. +We prefer to attribute this work to the curators so that they get credit and +other members of the community can ask questions about the curated data. +If you want to edit studies and trees, the curation tool will require +a log in via a GitHub account. If your email address has not been made public in +your GitHub user profile, it will not appear in our study data, but +it's possible that git operations using other tools will reveal your +email address. +

            +
              +
            1. See above: The information in "What information do we keep about logged-in users?" applies to curators
              2. +
            2. GitHub id, your name: When you help with curation, your GitHub username is used as the author of a git commit + so that you get credit for the curation activity. + The username (and your real name if that information is public on your GitHub profile) is publicly visible at in the + git repository storing the curated information. + Those repositories include information on: +
              3. +
            3. your email address: If you have made your email address publicly visible in your GitHub profile, then that address will + occur in the git commit metadata when you save a study. If your email address is not public, then "ANONYMOUS" will be used in the git commit + metadata in place of your email.
              4. +
            + +

            What information do we keep about commenters who are logged-in via GitHub?

            +
              +
            1. See above: The information in "What information do we keep about logged-in users?" applies to curators
              2. +
            2. Comment data:The same information that is described in "What information do we keep about anonymous comments on the tree?" is + associated with the logged-in commenters, except that the comment will appear as an issue that you created on GitHub. + Your name and a link to your GitHub profile will appear in the author field. + You can use the GitHub account settings to control whether you get email about responses to your comment.
              3. +
            + +

            Who can you talk to about data privacy?

            +

            +If you have questions about how we handle personal data, or if you'd +like your personal information to be removed, please send a message to +privacy@opentreeoflife.org. +

            + +
            +
            + +

            Comments

            +{{=plugin_localcomments(filter='url',url=request.url)}} + +
            + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/progress.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/progress.html new file mode 100644 index 000000000..c350406ad --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/progress.html @@ -0,0 +1,743 @@ +{{response.title = "Progress - Open Tree of Life" + ### response.files.append("/curator/static/js/d3.v3.js") + response.files.append("/curator/static/js/d3.v3.min.js") }} +{{extend 'layout.html'}} +{{import urllib}} +{{from pprint import pprint}} +{{### Add support scripts for parsing ISO-8601 dates + #response.files.append(URL('static','js/moment.min.js')) +}} + +
            +

            Open Tree progress

            +
            +
            +

            + The Open Tree of Life project includes periodic releases of + OTT (Open Tree taxonomy) + and the + latest synthetic tree, + as well as incremental addition of published phylogenetic trees. + The timeline below shows the increase in the number of OTUs + (operational taxonomic units) in various components. Note the + large gap between the number of taxa in OTT and the number of + taxa in our datastore (phylesystem) and the synthetic tree! + Please help close this gap by adding published trees through our + curator application. +
            + +

            +

            Move the mouse below to see details for any date.

            +
            +
            + + +
            + +

            Comments

            + {{=plugin_localcomments(filter='url',url=request.url)}} + +
            + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/references.jinja2 b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/references.jinja2 new file mode 100644 index 000000000..50aa0c03d --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/references.jinja2 @@ -0,0 +1,189 @@ +{% extends "../layout.jinja2" %} + +{% block center %} +{# import urllib #} +{# from pprint import pprint #} + + +
            +

            Bibliographic references for the synthetic tree

            +
            +
            +

            The following studies (listed alphabetically by first author) have contributed to the current synthetic tree.

            +
            +
            + +
            +
            + + + + + {% set priority = 1 %} + {% for study in contributing_studies: %} +
            6}".format(priority) }}"> +
            + {{ study.get('ot:studyPublicationReference') }} + {% if study.get('ot:studyPublication'): %} + {{ latest_CrossRef_URL(study.get('ot:studyPublication')) }} + {% else: %} +
            + + No link provided! Try + + Google Scholar or + + CrossRef.org + +
            + {% endif %} +
            +
            + Open study in curator application + Show links to included trees ({{ len(study['tree_ids']) }}) +
            + {% for tree_id in study['tree_ids']: %} + {{ tree_id }} + {% endfor %} +
            + Browse focal clade in synthetic tree + Download current NexSON + {% if study.get('commit_SHA_in_synthesis', None): %} + Download version used in synthesis + {% endif %} + + {% if study.get('friendlyDepositMessage', None): %} + {{ XML(study.get('friendlyDepositMessage')) }} + {% elif study.get('ot:dataDeposit', None): %} + Data deposit DOI/URL + {% endif %} +
            +
            + {% set priority = priority + 1 %} + {% endfor %} +
            + +
            + +

            Comments

            + {# plugin_localcomments(filter='url',url=request.url) #} + +
            + + +{% endblock center %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/synthesis_release.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/synthesis_release.html new file mode 100644 index 000000000..ff59fafe5 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/synthesis_release.html @@ -0,0 +1,374 @@ +{{response.title = "Synthesis release {v} - Open Tree of Life".format(v=release_version) + ### response.files.append("/curator/static/js/d3.v3.js") + response.files.append("/curator/static/js/d3.v3.min.js") }} +{{extend 'layout.html'}} +{{import urllib}} +{{from pprint import pprint}} +{{### Add support scripts for parsing ISO-8601 dates + #response.files.append(URL('static','js/moment.min.js')) +}} + +
            +

            Synthesis release +

            +   + +   + + +
            +
            + + + + +

            Statistics

            + +
            + + +

            Release notes

            + A fuller release history (including early draft versions) is available in the germinator documentation: + {{ if synthesis_release_notes: }} +
            + {{ # REMINDER: web2py's sanitize can't handle Unicode! }} + {{= XML(synthesis_release_notes, sanitize=False) }} +
            + {{ else: }} +
            + No release notes found for this synthesis release! +
            + {{ pass }} + + + + +

            Comments

            + {{=plugin_localcomments(filter='url',url=request.url)}} + + + +
            + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/taxonomy_version.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/taxonomy_version.html new file mode 100644 index 000000000..fd6cee688 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/taxonomy_version.html @@ -0,0 +1,329 @@ +{{response.title = "Taxonomy release {v} - Open Tree of Life".format(v=taxonomy_version)}} +{{extend 'layout.html'}} +{{import urllib}} +{{from pprint import pprint}} +{{### Add support scripts for parsing ISO-8601 dates + #response.files.append(URL('static','js/moment.min.js')) +}} + + +
            +

            Taxonomy version +

            +   + +   + + +
            +
            + + + + + + +

            Statistics

            + + + +

            Release notes

            + A fuller release history (including early draft versions) is available in the OTT documentation: + {{ if taxonomy_version_notes: }} +
            + {{ # REMINDER: web2py's sanitize can't handle Unicode! }} + {{= XML(taxonomy_version_notes, sanitize=False) }} +
            + {{ else: }} +
            + No release notes found for this taxonomy version! +
            + {{ pass }} + +
            + +
            + +

            Comments

            + {{=plugin_localcomments(filter='url',url=request.url)}} + +
            + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_source_tree_manager.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_source_tree_manager.html new file mode 100644 index 000000000..1241bb7fa --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_source_tree_manager.html @@ -0,0 +1,49 @@ +{{extend 'layout.html'}} + +
            +

            About Phylografter, the source tree manager

            + +
            +
            +

            + TODO: What else goes here? Lorem ipsum dolor sit amet, + consectetur adipiscing elit. In bibendum, magna et viverra + tincidunt, nisi leo dapibus massa, sit amet fermentum dui magna a + nunc. Maecenas a ligula libero. Cras id tempus dui. +

            +

            + Vivamus urna lectus, rutrum nec odio ac, ullamcorper sagittis + dolor. Sed lacinia dolor a mauris mollis cursus. Fusce tristique + dictum luctus. Vestibulum ante ipsum primis in faucibus orci + luctus et ultrices posuere cubilia Curae; Nam arcu nisi, pharetra + at felis et, condimentum bibendum tellus. In vitae ante ut elit + mollis auctor sed a tortor. +

            +

            + Ut magna dolor, ultricies nec leo sed, tempor iaculis orci. + Integer dignissim odio nec odio imperdiet, ac ultrices sapien + tristique. In a urna ut eros hendrerit fringilla nec ut ligula. + Sed pulvinar sem vel turpis dapibus mattis. Etiam pretium nibh + quis turpis vulputate suscipit. Suspendisse consequat, dolor + vitae aliquet rhoncus, ipsum nisi tincidunt odio, non pretium + felis erat nec elit. Nullam quis mi lobortis orci volutpat + commodo in iaculis nulla. Mauris sit amet ante quis lectus + vestibulum varius sed vel nisi. +

            +

            + Nam at vehicula augue. Vestibulum varius ligula ante, sit amet + gravida mi semper non. Nunc ornare bibendum ultrices. Ut nec + porttitor enim. Vivamus luctus semper risus, ac imperdiet ante + pulvinar in. +

            +
            +
            + +

            Comments

            + {{=plugin_localcomments(filter='url',url=request.url)}} + +
            + + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_synthetic_tree.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_synthetic_tree.html new file mode 100644 index 000000000..d38ffcbb0 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_synthetic_tree.html @@ -0,0 +1,49 @@ +{{extend 'layout.html'}} + +
            +

            About the synthetic tree

            + +
            +
            +

            + TODO: What else goes here? Lorem ipsum dolor sit amet, + consectetur adipiscing elit. In bibendum, magna et viverra + tincidunt, nisi leo dapibus massa, sit amet fermentum dui magna a + nunc. Maecenas a ligula libero. Cras id tempus dui. +

            +

            + Vivamus urna lectus, rutrum nec odio ac, ullamcorper sagittis + dolor. Sed lacinia dolor a mauris mollis cursus. Fusce tristique + dictum luctus. Vestibulum ante ipsum primis in faucibus orci + luctus et ultrices posuere cubilia Curae; Nam arcu nisi, pharetra + at felis et, condimentum bibendum tellus. In vitae ante ut elit + mollis auctor sed a tortor. +

            +

            + Ut magna dolor, ultricies nec leo sed, tempor iaculis orci. + Integer dignissim odio nec odio imperdiet, ac ultrices sapien + tristique. In a urna ut eros hendrerit fringilla nec ut ligula. + Sed pulvinar sem vel turpis dapibus mattis. Etiam pretium nibh + quis turpis vulputate suscipit. Suspendisse consequat, dolor + vitae aliquet rhoncus, ipsum nisi tincidunt odio, non pretium + felis erat nec elit. Nullam quis mi lobortis orci volutpat + commodo in iaculis nulla. Mauris sit amet ante quis lectus + vestibulum varius sed vel nisi. +

            +

            + Nam at vehicula augue. Vestibulum varius ligula ante, sit amet + gravida mi semper non. Nunc ornare bibendum ultrices. Ut nec + porttitor enim. Vivamus luctus semper risus, ac imperdiet ante + pulvinar in. +

            +
            +
            + +

            Comments

            + {{=plugin_localcomments(filter='url',url=request.url)}} + +
            + + From 8fc9cc7136ed099d3946e7be7475ddeb83b92976 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Tue, 14 Nov 2023 11:55:27 -0500 Subject: [PATCH 35/86] Implement page setup for About pages (ongoing) --- .../synthetic_tree_viewer/views/about.py | 51 +++++++++++++++++++ 1 file changed, 51 insertions(+) create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/views/about.py diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py new file mode 100644 index 000000000..58dc62f33 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py @@ -0,0 +1,51 @@ +from pyramid.view import view_config +from synthetic_tree_viewer.opentreewebapputil import ( + get_user_display_name, + get_conf, + get_conf_as_dict, + get_domain_banner_text, + get_domain_banner_hovertext, + get_currently_deployed_opentree_branch, + get_opentree_services_method_urls, + latest_CrossRef_URL, + fetch_current_TNRS_context_names, + ) +from pyramid.httpexceptions import HTTPNotFound, HTTPSeeOther + +def _minimal_about_viewdict(request): + # First, copy our boilerplate config vars (getDraftTreeID_url, etc) + view_dict = get_opentree_services_method_urls(request) + + # Then add/override with these explicit key-value pairs + view_dict.update({ + # NB - Duplicate keys will be resolved in favor of the values below! + 'conf': get_conf(request), # needed for the footer diagnostics + 'response': request.response, + 'registry': request.registry, + 'taxonSearchContextNames': fetch_current_TNRS_context_names(request), + 'domain_banner_text': get_domain_banner_text(request), + 'domain_banner_hovertext': get_domain_banner_hovertext(request), + }) + + if request.params.get('parentWindowURL', None): + plain_feedback_url = unquote_plus(request.params.get('parentWindowURL')) + view_dict['feedbackParentWindowURL'] = plain_feedback_url + else: + view_dict['feedbackParentWindowURL'] = None + + return view_dict + + +@view_config(route_name='about_open_tree_of_life', + renderer='synthetic_tree_viewer:templates/about/open_tree_of_life.jinja2') +@view_config(route_name='about', + renderer='synthetic_tree_viewer:templates/about/open_tree_of_life.jinja2') +@view_config(route_name='about_references', + renderer='synthetic_tree_viewer:templates/about/references.jinja2') +def about_open_tree_of_life(request): + # provide view context for a dumb template + view_dict = _minimal_about_viewdict(request) + + view_dict['contributingStudies'] = ['a', 'b'] + + return view_dict From 37350fdf3161cb7b130147613289096e34e82644 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Mon, 20 Nov 2023 13:28:13 -0500 Subject: [PATCH 36/86] Add Privacy page; fix default /about (via redirect) --- .../{privacy_policy.html => privacy_policy.jinja2} | 6 ++++-- .../synthetic_tree_viewer/views/about.py | 14 +++++++++++--- 2 files changed, 15 insertions(+), 5 deletions(-) rename synthetic_tree_viewer/synthetic_tree_viewer/templates/about/{privacy_policy.html => privacy_policy.jinja2} (98%) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.jinja2 similarity index 98% rename from synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.html rename to synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.jinja2 index 0010865b1..001378c4e 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.html +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/privacy_policy.jinja2 @@ -1,5 +1,6 @@ -{{extend 'layout.html'}} +{% extends "../layout.jinja2" %} +{% block center %}

            Privacy Policy

            @@ -147,10 +148,11 @@

            Who can you talk to about data privacy?

            Comments

            -{{=plugin_localcomments(filter='url',url=request.url)}} +{# plugin_localcomments(filter='url',url=request.url) #}
            +{% endblock center %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py index 58dc62f33..770b7db12 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py @@ -10,7 +10,10 @@ latest_CrossRef_URL, fetch_current_TNRS_context_names, ) -from pyramid.httpexceptions import HTTPNotFound, HTTPSeeOther +from pyramid.httpexceptions import ( + HTTPNotFound, + HTTPSeeOther, + ) def _minimal_about_viewdict(request): # First, copy our boilerplate config vars (getDraftTreeID_url, etc) @@ -36,12 +39,17 @@ def _minimal_about_viewdict(request): return view_dict -@view_config(route_name='about_open_tree_of_life', - renderer='synthetic_tree_viewer:templates/about/open_tree_of_life.jinja2') @view_config(route_name='about', renderer='synthetic_tree_viewer:templates/about/open_tree_of_life.jinja2') +def about_default_redirect(request): + raise HTTPSeeOther(location='/about/open-tree-of-life') + +@view_config(route_name='about_open_tree_of_life', + renderer='synthetic_tree_viewer:templates/about/open_tree_of_life.jinja2') @view_config(route_name='about_references', renderer='synthetic_tree_viewer:templates/about/references.jinja2') +@view_config(route_name='about_privacy_policy', + renderer='synthetic_tree_viewer:templates/about/privacy_policy.jinja2') def about_open_tree_of_life(request): # provide view context for a dumb template view_dict = _minimal_about_viewdict(request) From 6fe12f2dceac1c9f0ccacf91a9157a25a46cbf71 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Mon, 20 Nov 2023 14:20:01 -0500 Subject: [PATCH 37/86] Migrate About/Licenses page --- .../about/{licenses.html => licenses.jinja2} | 132 +++++++++--------- .../synthetic_tree_viewer/views/about.py | 2 + 2 files changed, 69 insertions(+), 65 deletions(-) rename synthetic_tree_viewer/synthetic_tree_viewer/templates/about/{licenses.html => licenses.jinja2} (53%) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/licenses.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/licenses.jinja2 similarity index 53% rename from synthetic_tree_viewer/synthetic_tree_viewer/templates/about/licenses.html rename to synthetic_tree_viewer/synthetic_tree_viewer/templates/about/licenses.jinja2 index a273d929b..39e192b6f 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/licenses.html +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/licenses.jinja2 @@ -1,5 +1,6 @@ -{{extend 'layout.html'}} +{% extends "../layout.jinja2" %} +{% block center %}

            Data rights

            @@ -44,189 +45,189 @@

            JavaScript license information

            Un-minified source code - html5shiv.js + html5shiv.js GPL 2 html5shiv.js - superfish.js + superfish.js Expat (as MIT) - superfish.js + superfish.js - raphael-min.js + raphael-min.js Expat (as MIT) raphael.js - drawtree.js + drawtree.js FreeBSD (as BSD 2-Clause) - drawtree.js + drawtree.js - drawtree.js + drawtree.js FreeBSD (as BSD 2-Clause) - drawtree.js + drawtree.js - jquery.history.js + jquery.history.js BSD 3-Clause (as New BSD) jquery.history.js - jquery.splitter-0.6.js + jquery.splitter-0.6.js GPL 3 - jquery.splitter-0.6.js + jquery.splitter-0.6.js - bootstrap-transition.js + bootstrap-transition.js Apache 2 - bootstrap-transition.js + bootstrap-transition.js - bootstrap-alert.js + bootstrap-alert.js Apache 2 - bootstrap-alert.js + bootstrap-alert.js - bootstrap-modal.js + bootstrap-modal.js Apache 2 - bootstrap-modal.js + bootstrap-modal.js - bootstrap-dropdown.js + bootstrap-dropdown.js Apache 2 - bootstrap-dropdown.js + bootstrap-dropdown.js - bootstrap-scrollspy.js + bootstrap-scrollspy.js Apache 2 - bootstrap-scrollspy.js + bootstrap-scrollspy.js - bootstrap-tab.js + bootstrap-tab.js Apache 2 - bootstrap-tab.js + bootstrap-tab.js - bootstrap-tooltip.js + bootstrap-tooltip.js Apache 2 - bootstrap-tooltip.js + bootstrap-tooltip.js - bootstrap-popover.js + bootstrap-popover.js Apache 2 - bootstrap-popover.js + bootstrap-popover.js - bootstrap-button.js + bootstrap-button.js Apache 2 - bootstrap-button.js + bootstrap-button.js - bootstrap-collapse.js + bootstrap-collapse.js Apache 2 - bootstrap-collapse.js + bootstrap-collapse.js - bootstrap-carousel.js + bootstrap-carousel.js Apache 2 - bootstrap-carousel.js + bootstrap-carousel.js - bootstrap-typeahead.js + bootstrap-typeahead.js Apache 2 - bootstrap-typeahead.js + bootstrap-typeahead.js - web2py.js + web2py.js Lesser GPL - web2py.js + web2py.js - calendar.js + calendar.js Lesser GPL calendar.js - moment.min.js + moment.min.js Expat (as MIT) archive2.8.3.zip - study-creation.js + study-creation.js FreeBSD (as BSD 2-Clause) - study-creation.js + study-creation.js - study-editor.js + study-editor.js FreeBSD (as BSD 2-Clause) - study-editor.js + study-editor.js - curation-helpers.js + curation-helpers.js FreeBSD (as BSD 2-Clause) - curation-helpers.js + curation-helpers.js - modernizr.custom.js + modernizr.custom.js Expat (as MIT) v2.6.2.zip - json2.js + json2.js Public Domain - json2.js + json2.js - knockout-2.3.0.js + knockout-2.3.0.js Expat (as MIT) v2.3.0.zip - knockout-bootstrap.min.js + knockout-bootstrap.min.js Expat (as MIT) v0.2.1.zip - knockout-paged-e4a5770702.js + knockout-paged-e4a5770702.js Expat (as MIT) knockout-paged.js - jquery.fileupload.js + jquery.fileupload.js Expat (as MIT) - jquery.fileupload.js + jquery.fileupload.js - jquery.iframe-transport.js + jquery.iframe-transport.js Expat (as MIT) - jquery.iframe-transport.js + jquery.iframe-transport.js - jquery.ui.widget.js + jquery.ui.widget.js Expat (as MIT) - jquery.ui.widget.js + jquery.ui.widget.js - bootstrap-tagsinput.min.js + bootstrap-tagsinput.min.js Expat (as MIT) 0.3.9.zip - bootstrap-dropdown.js + bootstrap-dropdown.js Apache 2 - + - d3.phylogram.js + d3.phylogram.js FreeBSD (as BSD 2-Clause) - d3.phylogram.js + d3.phylogram.js - d3.v3.min.js + d3.v3.min.js BSD 3-Clause d3.js @@ -235,10 +236,11 @@

            JavaScript license information

            Comments

            - {{=plugin_localcomments(filter='url',url=request.url)}} + {# plugin_localcomments(filter='url',url=request.url) #}
            +{% endblock center %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py index 770b7db12..dbae428ff 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py @@ -50,6 +50,8 @@ def about_default_redirect(request): renderer='synthetic_tree_viewer:templates/about/references.jinja2') @view_config(route_name='about_privacy_policy', renderer='synthetic_tree_viewer:templates/about/privacy_policy.jinja2') +@view_config(route_name='about_licenses', + renderer='synthetic_tree_viewer:templates/about/licenses.jinja2') def about_open_tree_of_life(request): # provide view context for a dumb template view_dict = _minimal_about_viewdict(request) From 3ec49109ebe6729972f6ce0e9abe741f7ecdeac2 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Mon, 20 Nov 2023 22:18:20 -0500 Subject: [PATCH 38/86] Migrate and enable the Developer Resources page --- ...{developer_resources.html => developer_resources.jinja2} | 6 ++++-- synthetic_tree_viewer/synthetic_tree_viewer/views/about.py | 2 ++ 2 files changed, 6 insertions(+), 2 deletions(-) rename synthetic_tree_viewer/synthetic_tree_viewer/templates/about/{developer_resources.html => developer_resources.jinja2} (93%) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/developer_resources.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/developer_resources.jinja2 similarity index 93% rename from synthetic_tree_viewer/synthetic_tree_viewer/templates/about/developer_resources.html rename to synthetic_tree_viewer/synthetic_tree_viewer/templates/about/developer_resources.jinja2 index f8bb44f4a..6aa1583ab 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/developer_resources.html +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/developer_resources.jinja2 @@ -1,5 +1,6 @@ -{{extend 'layout.html'}} +{% extends "../layout.jinja2" %} +{% block center %}

            Developer resources

            @@ -36,10 +37,11 @@

            Links to various resources

            Comments

            - {{=plugin_localcomments(filter='url',url=request.url)}} + {# plugin_localcomments(filter='url',url=request.url) #} +{% endblock center %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py index dbae428ff..ec9d6497f 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py @@ -52,6 +52,8 @@ def about_default_redirect(request): renderer='synthetic_tree_viewer:templates/about/privacy_policy.jinja2') @view_config(route_name='about_licenses', renderer='synthetic_tree_viewer:templates/about/licenses.jinja2') +@view_config(route_name='about_developer_resources', + renderer='synthetic_tree_viewer:templates/about/developer_resources.jinja2') def about_open_tree_of_life(request): # provide view context for a dumb template view_dict = _minimal_about_viewdict(request) From 8c45e6445b9487e636aa57e073d797e0308108a3 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Tue, 21 Nov 2023 11:29:42 -0500 Subject: [PATCH 39/86] Restore Contact page --- .../templates/contact.jinja2 | 62 +++++++++++++++++++ .../synthetic_tree_viewer/views/about.py | 2 +- .../synthetic_tree_viewer/views/default.py | 7 +++ 3 files changed, 70 insertions(+), 1 deletion(-) create mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/contact.jinja2 diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/contact.jinja2 b/synthetic_tree_viewer/synthetic_tree_viewer/templates/contact.jinja2 new file mode 100644 index 000000000..9e8135598 --- /dev/null +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/contact.jinja2 @@ -0,0 +1,62 @@ +{% extends "layout.jinja2" %} + +{% block center %} +
            +

            Contact Us

            + +
            +
            + + + + + + + + + + + + + +
            + + Google Groups logo + + + We have three public google groups:
            + 1. opentreeoflife: general mailing list
            + 2. opentreeoflife-software: software discussion (largely deprecated in favour of Gitter; see below)
            + 3. opentreeoflife-announce: announcements of new releases and features; only admins can post
            +
            + + GitHub logo + + + All of our software is on + GitHub, + and you can leave bug reports and feature request as an + issue in our feedback repo. +
            + + Visit our Gitter room + + + Most of our project conversation happens in a public chat room on + Gitter. Clicking the logo at left will + take you to the room. You can browse without logging in, or use your + GitHub account to join the conversation. +
            + +

            Comments

            + {# plugin_localcomments(filter='url',url=request.url) #} + +
            +
            + +
            + + +{% endblock center %} diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py index ec9d6497f..b309e4e55 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/about.py @@ -54,7 +54,7 @@ def about_default_redirect(request): renderer='synthetic_tree_viewer:templates/about/licenses.jinja2') @view_config(route_name='about_developer_resources', renderer='synthetic_tree_viewer:templates/about/developer_resources.jinja2') -def about_open_tree_of_life(request): +def about_misc(request): # provide view context for a dumb template view_dict = _minimal_about_viewdict(request) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/views/default.py b/synthetic_tree_viewer/synthetic_tree_viewer/views/default.py index 64bf20ae9..3999df5af 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/views/default.py +++ b/synthetic_tree_viewer/synthetic_tree_viewer/views/default.py @@ -64,6 +64,13 @@ def home(request): # redirect to default tree view return HTTPSeeOther(location='/opentree/argus') +@view_config(route_name='contact', renderer='synthetic_tree_viewer:templates/contact.jinja2') +def contact(request): + view_dict = get_opentree_services_method_urls(request) + view_dict.update({ + 'taxonSearchContextNames': fetch_current_TNRS_context_names(request), + }) + return view_dict @view_config(route_name='tree_view', renderer='synthetic_tree_viewer:templates/tree_view.jinja2') def tree_view(request): From 242776541885a40643a6f2a706c3522d3bddfad0 Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Tue, 21 Nov 2023 11:34:53 -0500 Subject: [PATCH 40/86] Removing unused About pages (from web2py) --- .../templates/about/credits.html | 12 ----- .../about/materials_and_methods.html | 43 ---------------- .../about/the_source_tree_manager.html | 49 ------------------- .../templates/about/the_synthetic_tree.html | 49 ------------------- 4 files changed, 153 deletions(-) delete mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/about/credits.html delete mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/about/materials_and_methods.html delete mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_source_tree_manager.html delete mode 100644 synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_synthetic_tree.html diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/credits.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/credits.html deleted file mode 100644 index 62c90d149..000000000 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/credits.html +++ /dev/null @@ -1,12 +0,0 @@ -{{extend 'layout.html'}} -
            -

            Credits

            -See about for full credits -

            Comments

            - {{=plugin_localcomments(filter='url',url=request.url)}} - -
            - - diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/materials_and_methods.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/materials_and_methods.html deleted file mode 100644 index 148c2d0bd..000000000 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/materials_and_methods.html +++ /dev/null @@ -1,43 +0,0 @@ -{{extend 'layout.html'}} -{{import urllib}} - - -
            -

            Materials and methods

            - -
            -
            - -

            - TODO: What else goes here? Lorem ipsum dolor sit amet, - consectetur adipiscing elit. In bibendum, magna et viverra - tincidunt, nisi leo dapibus massa, sit amet fermentum dui magna a - nunc. Maecenas a ligula libero. Cras id tempus dui. -

            -

            - Nam at vehicula augue. Vestibulum varius ligula ante, sit amet - gravida mi semper non. Nunc ornare bibendum ultrices. Ut nec - porttitor enim. Vivamus luctus semper risus, ac imperdiet ante - pulvinar in. -

            -

            - Vivamus urna lectus, rutrum nec odio ac, ullamcorper sagittis - dolor. Sed lacinia dolor a mauris mollis cursus. Fusce tristique - dictum luctus. Vestibulum ante ipsum primis in faucibus orci - luctus et ultrices posuere cubilia Curae; Nam arcu nisi, pharetra - at felis et, condimentum bibendum tellus. In vitae ante ut elit - mollis auctor sed a tortor. -

            -
            - -
            - -

            Comments

            - {{=plugin_localcomments(filter='url',url=request.url)}} - -
            - - diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_source_tree_manager.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_source_tree_manager.html deleted file mode 100644 index 1241bb7fa..000000000 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_source_tree_manager.html +++ /dev/null @@ -1,49 +0,0 @@ -{{extend 'layout.html'}} - -
            -

            About Phylografter, the source tree manager

            - -
            -
            -

            - TODO: What else goes here? Lorem ipsum dolor sit amet, - consectetur adipiscing elit. In bibendum, magna et viverra - tincidunt, nisi leo dapibus massa, sit amet fermentum dui magna a - nunc. Maecenas a ligula libero. Cras id tempus dui. -

            -

            - Vivamus urna lectus, rutrum nec odio ac, ullamcorper sagittis - dolor. Sed lacinia dolor a mauris mollis cursus. Fusce tristique - dictum luctus. Vestibulum ante ipsum primis in faucibus orci - luctus et ultrices posuere cubilia Curae; Nam arcu nisi, pharetra - at felis et, condimentum bibendum tellus. In vitae ante ut elit - mollis auctor sed a tortor. -

            -

            - Ut magna dolor, ultricies nec leo sed, tempor iaculis orci. - Integer dignissim odio nec odio imperdiet, ac ultrices sapien - tristique. In a urna ut eros hendrerit fringilla nec ut ligula. - Sed pulvinar sem vel turpis dapibus mattis. Etiam pretium nibh - quis turpis vulputate suscipit. Suspendisse consequat, dolor - vitae aliquet rhoncus, ipsum nisi tincidunt odio, non pretium - felis erat nec elit. Nullam quis mi lobortis orci volutpat - commodo in iaculis nulla. Mauris sit amet ante quis lectus - vestibulum varius sed vel nisi. -

            -

            - Nam at vehicula augue. Vestibulum varius ligula ante, sit amet - gravida mi semper non. Nunc ornare bibendum ultrices. Ut nec - porttitor enim. Vivamus luctus semper risus, ac imperdiet ante - pulvinar in. -

            -
            -
            - -

            Comments

            - {{=plugin_localcomments(filter='url',url=request.url)}} - -
            - - diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_synthetic_tree.html b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_synthetic_tree.html deleted file mode 100644 index d38ffcbb0..000000000 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/the_synthetic_tree.html +++ /dev/null @@ -1,49 +0,0 @@ -{{extend 'layout.html'}} - -
            -

            About the synthetic tree

            - -
            -
            -

            - TODO: What else goes here? Lorem ipsum dolor sit amet, - consectetur adipiscing elit. In bibendum, magna et viverra - tincidunt, nisi leo dapibus massa, sit amet fermentum dui magna a - nunc. Maecenas a ligula libero. Cras id tempus dui. -

            -

            - Vivamus urna lectus, rutrum nec odio ac, ullamcorper sagittis - dolor. Sed lacinia dolor a mauris mollis cursus. Fusce tristique - dictum luctus. Vestibulum ante ipsum primis in faucibus orci - luctus et ultrices posuere cubilia Curae; Nam arcu nisi, pharetra - at felis et, condimentum bibendum tellus. In vitae ante ut elit - mollis auctor sed a tortor. -

            -

            - Ut magna dolor, ultricies nec leo sed, tempor iaculis orci. - Integer dignissim odio nec odio imperdiet, ac ultrices sapien - tristique. In a urna ut eros hendrerit fringilla nec ut ligula. - Sed pulvinar sem vel turpis dapibus mattis. Etiam pretium nibh - quis turpis vulputate suscipit. Suspendisse consequat, dolor - vitae aliquet rhoncus, ipsum nisi tincidunt odio, non pretium - felis erat nec elit. Nullam quis mi lobortis orci volutpat - commodo in iaculis nulla. Mauris sit amet ante quis lectus - vestibulum varius sed vel nisi. -

            -

            - Nam at vehicula augue. Vestibulum varius ligula ante, sit amet - gravida mi semper non. Nunc ornare bibendum ultrices. Ut nec - porttitor enim. Vivamus luctus semper risus, ac imperdiet ante - pulvinar in. -

            -
            -
            - -

            Comments

            - {{=plugin_localcomments(filter='url',url=request.url)}} - -
            - - From 0b2ad4bd2206ec9711d016eda8fc84c60e04ae2f Mon Sep 17 00:00:00 2001 From: Jim Allman Date: Tue, 21 Nov 2023 22:27:27 -0500 Subject: [PATCH 41/86] Finish the About > References page (lotsa logic) --- .../opentreewebapputil.py | 32 +++++- .../templates/about/references.jinja2 | 17 +-- .../synthetic_tree_viewer/views/about.py | 102 +++++++++++++++++- 3 files changed, 136 insertions(+), 15 deletions(-) diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/opentreewebapputil.py b/synthetic_tree_viewer/synthetic_tree_viewer/opentreewebapputil.py index cfe8bd9b8..1788bfbe5 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/opentreewebapputil.py +++ b/synthetic_tree_viewer/synthetic_tree_viewer/opentreewebapputil.py @@ -1,5 +1,6 @@ # adapted from web2py (applications.opentree.modules.opentreewebapputil) import os +import re import configparser _CONF_OBJ_DICT = {} @@ -88,9 +89,10 @@ def get_currently_deployed_opentree_branch(request): pass return branch_name -def latest_CrossRef_URL(): - # TODO - pass +def latest_CrossRef_URL(url): + if (not url): + return '' + return url.replace('http://dx.doi.org/', 'https://doi.org/') def get_opentree_services_domains(request): ''' @@ -189,3 +191,27 @@ def unique_ordered_list(seq): seen_add = seen.add return [ x for x in seq if x not in seen and not seen_add(x)] +treebase_deposit_doi = re.compile('//purl.org/phylo/treebase/phylows/study/TB2:S(?P\d+)') +def get_data_deposit_message(raw_deposit_doi): + # Returns a *compact* hyperlink (HTML) to study data, or an empty string if + # no DOI/URL is found. Some cryptic dataDeposit URLs require more + # explanation or a modified URL to be more web-friendly. + # + # NOTE that we maintain a client-side counterpart in + # curator/static/js/study-editor.js > getDataDepositMessage + raw_deposit_doi = raw_deposit_doi.strip() + if raw_deposit_doi == '': + return '' + + # TreeBASE URLs should point to a web page (vs RDF) + # EXAMPLE: http://purl.org/phylo/treebase/phylows/study/TB2:S13451 + # => http://treebase.org/treebase-web/search/study/summary.html?id=13451 + treebase_match = treebase_deposit_doi.search(raw_deposit_doi) + if treebase_match: + return ('Data in Treebase' % treebase_match.group('treebase_id')) + + # TODO: Add other substitutions? + + return ('Data deposit DOI/URL' % raw_deposit_doi) + diff --git a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/references.jinja2 b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/references.jinja2 index 50aa0c03d..41240171c 100644 --- a/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/references.jinja2 +++ b/synthetic_tree_viewer/synthetic_tree_viewer/templates/about/references.jinja2 @@ -1,7 +1,6 @@ {% extends "../layout.jinja2" %} {% block center %} -{# import urllib #} {# from pprint import pprint #}