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markdown/NonStiffODE/EnrightPryce_wpd.md

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Original file line numberDiff line numberDiff line change
@@ -11,7 +11,7 @@ The purpose of this benchmark is to test explicit Runge-Kutta methods on the Enr
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```julia
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using OrdinaryDiffEq, ParameterizedFunctions, ODEInterface,
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ODEInterfaceDiffEq, LSODA, Sundials, DiffEqDevTools,
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StaticArrays
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StaticArrays, OrdinaryDiffEqSIMDRK
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using Plots
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gr()
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@@ -38,21 +38,24 @@ reltols = 1.0 ./ 10.0 .^ (3:10)
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### SIMD Algorithms (Currently Disabled)
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Note: The SIMD RK methods will be added once the OrdinaryDiffEqSIMDRK package is publicly available.
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### SIMD Algorithms
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```julia
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# simdrkalgs = [
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# Dict(:alg=>MER5v2()),
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# Dict(:alg=>MER6v2()),
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# Dict(:alg=>RK6v4())
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# ]
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simdrkalgs = []
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simdrkalgs = [
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Dict(:alg=>MER5v2()),
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Dict(:alg=>MER6v2()),
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Dict(:alg=>RK6v4())
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]
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```
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```
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Any[]
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3-element Vector{Dict{Symbol}}:
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Dict(:alg => MER5v2(stage_limiter! = trivial_limiter!, step_limiter! = tri
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vial_limiter!, thread = static(false)))
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Dict(:alg => MER6v2(stage_limiter! = trivial_limiter!, step_limiter! = tri
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vial_limiter!, thread = static(false)))
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Dict(:alg => RK6v4(stage_limiter! = trivial_limiter!, step_limiter! = triv
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ial_limiter!, thread = static(false)))
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```
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@@ -72,7 +75,7 @@ setups = [
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```
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```
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4-element Vector{Dict{Symbol}}:
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7-element Vector{Dict{Symbol}}:
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Dict(:alg => OrdinaryDiffEqTsit5.Tsit5{typeof(OrdinaryDiffEqCore.trivial_l
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imiter!), typeof(OrdinaryDiffEqCore.trivial_limiter!), Static.False}(Ordina
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ryDiffEqCore.trivial_limiter!, OrdinaryDiffEqCore.trivial_limiter!, static(
@@ -95,6 +98,12 @@ limiter!), typeof(OrdinaryDiffEqCore.trivial_limiter!), Static.False}}(:alg
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typeof(OrdinaryDiffEqCore.trivial_limiter!), Static.False}(OrdinaryDiffEqC
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ore.trivial_limiter!, OrdinaryDiffEqCore.trivial_limiter!, static(false), t
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rue))
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Dict(:alg => MER5v2(stage_limiter! = trivial_limiter!, step_limiter! = tri
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vial_limiter!, thread = static(false)))
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Dict(:alg => MER6v2(stage_limiter! = trivial_limiter!, step_limiter! = tri
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vial_limiter!, thread = static(false)))
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Dict(:alg => RK6v4(stage_limiter! = trivial_limiter!, step_limiter! = triv
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ial_limiter!, thread = static(false)))
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```
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@@ -272,7 +281,11 @@ wp = WorkPrecisionSet(prob, abstols, reltols, setups; appxsol=test_sol, save_eve
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plot(wp; title="NC5")
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```
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![](figures/EnrightPryce_wpd_16_1.png)
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```
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Error: StackOverflowError:
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```
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@@ -287,7 +300,11 @@ wp = WorkPrecisionSet(prob, abstols, reltols, setups; appxsol=test_sol, save_eve
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plot(wp; title="ND1")
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```
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![](figures/EnrightPryce_wpd_17_1.png)
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```
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Error: StackOverflowError:
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```
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@@ -300,7 +317,11 @@ wp = WorkPrecisionSet(prob, abstols, reltols, setups; appxsol=test_sol, save_eve
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plot(wp; title="ND2")
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```
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![](figures/EnrightPryce_wpd_18_1.png)
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```
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Error: StackOverflowError:
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```
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@@ -313,7 +334,11 @@ wp = WorkPrecisionSet(prob, abstols, reltols, setups; appxsol=test_sol, save_eve
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plot(wp; title="ND3")
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```
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![](figures/EnrightPryce_wpd_19_1.png)
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```
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Error: StackOverflowError:
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```
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@@ -326,7 +351,11 @@ wp = WorkPrecisionSet(prob, abstols, reltols, setups; appxsol=test_sol, save_eve
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plot(wp; title="ND4")
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```
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329-
![](figures/EnrightPryce_wpd_20_1.png)
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```
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Error: StackOverflowError:
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```
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@@ -339,7 +368,11 @@ wp = WorkPrecisionSet(prob, abstols, reltols, setups; appxsol=test_sol, save_eve
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plot(wp; title="ND5")
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```
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342-
![](figures/EnrightPryce_wpd_21_1.png)
371+
```
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Error: StackOverflowError:
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```
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## Appendix
@@ -376,15 +409,16 @@ Environment:
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Package Information:
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```
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Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Project.toml`
380-
[2b5f629d] DiffEqBase v6.183.2
412+
Status `/cache/build/exclusive-amdci3-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Project.toml`
413+
[2b5f629d] DiffEqBase v6.184.0
381414
[f3b72e0c] DiffEqDevTools v2.48.0
382415
[615f187c] IfElse v0.1.1
383416
[7f56f5a3] LSODA v0.7.5
384417
⌅ [961ee093] ModelingToolkit v9.82.0
385418
[54ca160b] ODEInterface v0.5.0
386419
[09606e27] ODEInterfaceDiffEq v3.13.4
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[1dea7af3] OrdinaryDiffEq v6.101.0
420+
⌃ [1dea7af3] OrdinaryDiffEq v6.101.0
421+
[dc97f408] OrdinaryDiffEqSIMDRK v1.1.0
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⌃ [65888b18] ParameterizedFunctions v5.17.2
389423
[91a5bcdd] Plots v1.40.19
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[31c91b34] SciMLBenchmarks v0.1.3
@@ -399,7 +433,7 @@ Info Packages marked with ⌃ and ⌅ have new versions available. Those with
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And the full manifest:
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```
402-
Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Manifest.toml`
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Status `/cache/build/exclusive-amdci3-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Manifest.toml`
403437
[47edcb42] ADTypes v1.17.0
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[1520ce14] AbstractTrees v0.4.5
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[7d9f7c33] Accessors v0.1.42
@@ -440,7 +474,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
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⌅ [864edb3b] DataStructures v0.18.22
441475
[e2d170a0] DataValueInterfaces v1.0.0
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[8bb1440f] DelimitedFiles v1.9.1
443-
[2b5f629d] DiffEqBase v6.183.2
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[2b5f629d] DiffEqBase v6.184.0
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[459566f4] DiffEqCallbacks v4.9.0
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[f3b72e0c] DiffEqDevTools v2.48.0
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[77a26b50] DiffEqNoiseProcess v5.24.1
@@ -452,7 +486,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
452486
[31c24e10] Distributions v0.25.120
453487
[ffbed154] DocStringExtensions v0.9.5
454488
[5b8099bc] DomainSets v0.7.16
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[7c1d4256] DynamicPolynomials v0.6.2
489+
[7c1d4256] DynamicPolynomials v0.6.3
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[06fc5a27] DynamicQuantities v1.8.0
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[4e289a0a] EnumX v1.0.5
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[f151be2c] EnzymeCore v0.8.12
@@ -483,8 +517,9 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
483517
[42e2da0e] Grisu v1.0.2
484518
[cd3eb016] HTTP v1.10.17
485519
[eafb193a] Highlights v0.5.3
520+
[3e5b6fbb] HostCPUFeatures v0.1.17
486521
[34004b35] HypergeometricFunctions v0.3.28
487-
[7073ff75] IJulia v1.30.0
522+
[7073ff75] IJulia v1.30.1
488523
[615f187c] IfElse v0.1.1
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[d25df0c9] Inflate v0.1.5
490525
[18e54dd8] IntegerMathUtils v0.1.3
@@ -537,7 +572,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
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[4d8831e6] OpenSSL v1.5.0
538573
[429524aa] Optim v1.13.2
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[bac558e1] OrderedCollections v1.8.1
540-
[1dea7af3] OrdinaryDiffEq v6.101.0
575+
[1dea7af3] OrdinaryDiffEq v6.101.0
541576
[89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.5.0
542577
⌃ [6ad6398a] OrdinaryDiffEqBDF v1.9.0
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[bbf590c4] OrdinaryDiffEqCore v1.30.0
@@ -562,6 +597,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
562597
[af6ede74] OrdinaryDiffEqRKN v1.5.0
563598
⌃ [43230ef6] OrdinaryDiffEqRosenbrock v1.14.0
564599
⌃ [2d112036] OrdinaryDiffEqSDIRK v1.6.0
600+
[dc97f408] OrdinaryDiffEqSIMDRK v1.1.0
565601
[669c94d9] OrdinaryDiffEqSSPRK v1.6.0
566602
⌃ [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.5.0
567603
[358294b1] OrdinaryDiffEqStabilizedRK v1.4.0
@@ -599,7 +635,8 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
599635
[7e49a35a] RuntimeGeneratedFunctions v0.5.15
600636
[9dfe8606] SCCNonlinearSolve v1.4.0
601637
[94e857df] SIMDTypes v0.1.0
602-
⌃ [0bca4576] SciMLBase v2.112.0
638+
[476501e8] SLEEFPirates v0.6.43
639+
[0bca4576] SciMLBase v2.114.0
603640
[31c91b34] SciMLBenchmarks v0.1.3
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[19f34311] SciMLJacobianOperators v0.1.8
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[c0aeaf25] SciMLOperators v1.6.0
@@ -649,6 +686,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
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[45397f5d] UnitfulLatexify v1.7.0
650687
[a7c27f48] Unityper v0.1.6
651688
[41fe7b60] Unzip v0.2.0
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[3d5dd08c] VectorizationBase v0.21.71
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[81def892] VersionParsing v1.3.0
653691
[44d3d7a6] Weave v0.10.12
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[ddb6d928] YAML v0.4.14

markdown/NonStiffODE/FitzhughNagumo_wpd.md

Lines changed: 19 additions & 11 deletions
Original file line numberDiff line numberDiff line change
@@ -11,7 +11,7 @@ The purpose of this is to see how the errors scale on a standard nonlinear probl
1111
```julia
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using OrdinaryDiffEq, ParameterizedFunctions, ODEInterface,
1313
ODEInterfaceDiffEq, LSODA, Sundials, DiffEqDevTools,
14-
StaticArrays
14+
StaticArrays, OrdinaryDiffEqSIMDRK
1515
using Plots;
1616
gr()
1717

@@ -52,7 +52,10 @@ setups = [Dict(:alg=>DP5())
5252
Dict(:alg=>Tsit5())
5353
Dict(:alg=>Vern6())
5454
Dict(:alg=>Tsit5(), :prob_choice => 2)
55-
Dict(:alg=>Vern6(), :prob_choice => 2)]
55+
Dict(:alg=>Vern6(), :prob_choice => 2)
56+
Dict(:alg=>MER5v2(), :prob_choice => 2)
57+
Dict(:alg=>MER6v2(), :prob_choice => 2)
58+
Dict(:alg=>RK6v4(), :prob_choice => 2)]
5659
wp = WorkPrecisionSet(probs, abstols, reltols, setups; appxsol = test_sol,
5760
save_everystep = false, numruns = 100, maxiters = 1000)
5861
plot(wp)
@@ -251,15 +254,16 @@ Environment:
251254
Package Information:
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253256
```
254-
Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Project.toml`
255-
[2b5f629d] DiffEqBase v6.183.2
257+
Status `/cache/build/exclusive-amdci3-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Project.toml`
258+
[2b5f629d] DiffEqBase v6.184.0
256259
[f3b72e0c] DiffEqDevTools v2.48.0
257260
[615f187c] IfElse v0.1.1
258261
[7f56f5a3] LSODA v0.7.5
259262
⌅ [961ee093] ModelingToolkit v9.82.0
260263
[54ca160b] ODEInterface v0.5.0
261264
[09606e27] ODEInterfaceDiffEq v3.13.4
262-
[1dea7af3] OrdinaryDiffEq v6.101.0
265+
⌃ [1dea7af3] OrdinaryDiffEq v6.101.0
266+
[dc97f408] OrdinaryDiffEqSIMDRK v1.1.0
263267
⌃ [65888b18] ParameterizedFunctions v5.17.2
264268
[91a5bcdd] Plots v1.40.19
265269
[31c91b34] SciMLBenchmarks v0.1.3
@@ -274,7 +278,7 @@ Info Packages marked with ⌃ and ⌅ have new versions available. Those with
274278
And the full manifest:
275279

276280
```
277-
Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Manifest.toml`
281+
Status `/cache/build/exclusive-amdci3-0/julialang/scimlbenchmarks-dot-jl/benchmarks/NonStiffODE/Manifest.toml`
278282
[47edcb42] ADTypes v1.17.0
279283
[1520ce14] AbstractTrees v0.4.5
280284
[7d9f7c33] Accessors v0.1.42
@@ -315,7 +319,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
315319
⌅ [864edb3b] DataStructures v0.18.22
316320
[e2d170a0] DataValueInterfaces v1.0.0
317321
[8bb1440f] DelimitedFiles v1.9.1
318-
[2b5f629d] DiffEqBase v6.183.2
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[2b5f629d] DiffEqBase v6.184.0
319323
[459566f4] DiffEqCallbacks v4.9.0
320324
[f3b72e0c] DiffEqDevTools v2.48.0
321325
[77a26b50] DiffEqNoiseProcess v5.24.1
@@ -327,7 +331,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
327331
[31c24e10] Distributions v0.25.120
328332
[ffbed154] DocStringExtensions v0.9.5
329333
[5b8099bc] DomainSets v0.7.16
330-
[7c1d4256] DynamicPolynomials v0.6.2
334+
[7c1d4256] DynamicPolynomials v0.6.3
331335
[06fc5a27] DynamicQuantities v1.8.0
332336
[4e289a0a] EnumX v1.0.5
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[f151be2c] EnzymeCore v0.8.12
@@ -358,8 +362,9 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
358362
[42e2da0e] Grisu v1.0.2
359363
[cd3eb016] HTTP v1.10.17
360364
[eafb193a] Highlights v0.5.3
365+
[3e5b6fbb] HostCPUFeatures v0.1.17
361366
[34004b35] HypergeometricFunctions v0.3.28
362-
[7073ff75] IJulia v1.30.0
367+
[7073ff75] IJulia v1.30.1
363368
[615f187c] IfElse v0.1.1
364369
[d25df0c9] Inflate v0.1.5
365370
[18e54dd8] IntegerMathUtils v0.1.3
@@ -412,7 +417,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
412417
[4d8831e6] OpenSSL v1.5.0
413418
[429524aa] Optim v1.13.2
414419
[bac558e1] OrderedCollections v1.8.1
415-
[1dea7af3] OrdinaryDiffEq v6.101.0
420+
[1dea7af3] OrdinaryDiffEq v6.101.0
416421
[89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.5.0
417422
⌃ [6ad6398a] OrdinaryDiffEqBDF v1.9.0
418423
[bbf590c4] OrdinaryDiffEqCore v1.30.0
@@ -437,6 +442,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
437442
[af6ede74] OrdinaryDiffEqRKN v1.5.0
438443
⌃ [43230ef6] OrdinaryDiffEqRosenbrock v1.14.0
439444
⌃ [2d112036] OrdinaryDiffEqSDIRK v1.6.0
445+
[dc97f408] OrdinaryDiffEqSIMDRK v1.1.0
440446
[669c94d9] OrdinaryDiffEqSSPRK v1.6.0
441447
⌃ [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.5.0
442448
[358294b1] OrdinaryDiffEqStabilizedRK v1.4.0
@@ -474,7 +480,8 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
474480
[7e49a35a] RuntimeGeneratedFunctions v0.5.15
475481
[9dfe8606] SCCNonlinearSolve v1.4.0
476482
[94e857df] SIMDTypes v0.1.0
477-
⌃ [0bca4576] SciMLBase v2.112.0
483+
[476501e8] SLEEFPirates v0.6.43
484+
[0bca4576] SciMLBase v2.114.0
478485
[31c91b34] SciMLBenchmarks v0.1.3
479486
[19f34311] SciMLJacobianOperators v0.1.8
480487
[c0aeaf25] SciMLOperators v1.6.0
@@ -524,6 +531,7 @@ Status `/cache/build/exclusive-amdci1-0/julialang/scimlbenchmarks-dot-jl/benchma
524531
[45397f5d] UnitfulLatexify v1.7.0
525532
[a7c27f48] Unityper v0.1.6
526533
[41fe7b60] Unzip v0.2.0
534+
[3d5dd08c] VectorizationBase v0.21.71
527535
[81def892] VersionParsing v1.3.0
528536
[44d3d7a6] Weave v0.10.12
529537
[ddb6d928] YAML v0.4.14

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