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Merge pull request #50 from arnold-c/49-correct-github-link-in-workshop-schedule
Update GitHub link in exercise requirements to 2025 page
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_book/exercise-requirements.html

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<span id="cb1-5"><a href="#cb1-5"></a> <span class="st">"gt"</span>,</span>
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<span id="cb1-6"><a href="#cb1-6"></a> <span class="st">"ggtext"</span>,</span>
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<span id="cb1-7"><a href="#cb1-7"></a> <span class="st">"here"</span>,</span>
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<span id="cb1-8"><a href="#cb1-8"></a> <span class="st">"rio"</span>,</span>
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<span id="cb1-8"><a href="#cb1-8"></a> <span class="st">"rio"</span></span>
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<span id="cb1-9"><a href="#cb1-9"></a>))</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
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</details>
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</div>
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</section><section id="data-files" class="level2"><h2 class="anchored" data-anchor-id="data-files">Data Files</h2>
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<p>To complete the exercises, some data files are required. The exercises should load the datafiles via urls, but if you would prefer to download them to your own machine, your are welcome to do so. To download the files, go to the <a href="https://github.com/arnold-c/SISMID-Module-02_2023">GitHub repository</a> and download the files in the <code>data/</code> folder of your repository. You should then uncomment the lines of code that run <code>... &lt;- rio::import(here::here("data", ...))</code>, and comment out the lines that include the URLs.</p>
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<p>To complete the exercises, some data files are required. The exercises should load the datafiles via urls, but if you would prefer to download them to your own machine, your are welcome to do so. To download the files, go to the <a href="https://github.com/arnold-c/SISMID-Module-02_2025">GitHub repository</a> and download the files in the <code>data/</code> folder of your repository. You should then uncomment the lines of code that run <code>... &lt;- rio::import(here::here("data", ...))</code>, and comment out the lines that include the URLs.</p>
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<span id="cb2-26"><a href="#cb2-26"></a></span>
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<span id="cb2-27"><a href="#cb2-27"></a>To complete the exercises, some data files are required.</span>
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<span id="cb2-28"><a href="#cb2-28"></a>The exercises should load the datafiles via urls, but if you would prefer to download them to your own machine, your are welcome to do so.</span>
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<span id="cb2-29"><a href="#cb2-29"></a>To download the files, go to the <span class="co">[</span><span class="ot">GitHub repository</span><span class="co">](https://github.com/arnold-c/SISMID-Module-02_2023)</span> and download the files in the <span class="in">`data/`</span> folder of your repository.</span>
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<span id="cb2-29"><a href="#cb2-29"></a>To download the files, go to the <span class="co">[</span><span class="ot">GitHub repository</span><span class="co">](https://github.com/arnold-c/SISMID-Module-02_2025)</span> and download the files in the <span class="in">`data/`</span> folder of your repository.</span>
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<span id="cb2-30"><a href="#cb2-30"></a>You should then uncomment the lines of code that run <span class="in">`... &lt;- rio::import(here::here("data", ...))`</span>, and comment out the lines that include the URLs.</span>
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</code><button title="Copy to Clipboard" class="code-copy-button" data-in-quarto-modal=""><i class="bi"></i></button></pre></div>
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</div></div></div></div></div>

_book/index.html

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<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
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<meta name="author" content="Callum Arnold">
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<meta name="dcterms.date" content="2025-07-10">
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<meta name="dcterms.date" content="2025-07-11">
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<title>SISMID Module 1 Materials (2025)</title>
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<div>
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<div class="quarto-title-meta-heading">Published</div>
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<div class="quarto-title-meta-contents">
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<p class="date">July 10, 2025</p>
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<p class="date">July 11, 2025</p>
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</div>
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</div>
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_book/search.json

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"href": "exercise-requirements.html",
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"title": "Exercise Requirements",
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"section": "",
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"text": "R Packages\nIf you use renv to manage package dependencies in your projects, you can visit the GitHub repository for this project and download the renv.lock, .Rprofile, and renv/activate.R files, before running the command renv::restore(). Alternatively, if you already use GitHub, you could clone the project and just run renv::restore().\nIf you would prefer to just install the packages manually to avoid the complications associated with using renv, you can install the packages printed below.\nCodeinstall.packages(c(\n \"tidyverse\",\n \"deSolve\",\n \"diagram\",\n \"gt\",\n \"ggtext\",\n \"here\",\n \"rio\",\n))",
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"text": "R Packages\nIf you use renv to manage package dependencies in your projects, you can visit the GitHub repository for this project and download the renv.lock, .Rprofile, and renv/activate.R files, before running the command renv::restore(). Alternatively, if you already use GitHub, you could clone the project and just run renv::restore().\nIf you would prefer to just install the packages manually to avoid the complications associated with using renv, you can install the packages printed below.\nCodeinstall.packages(c(\n \"tidyverse\",\n \"deSolve\",\n \"diagram\",\n \"gt\",\n \"ggtext\",\n \"here\",\n \"rio\"\n))",
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"crumbs": [
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"Pre-Requisites",
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"Exercise Requirements"

_freeze/exercise-requirements/execute-results/html.json

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{
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"hash": "de777300cad4d430af3612d882b2325a",
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"hash": "38f265a05b9ee966eb1174dadeb4d146",
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"result": {
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"engine": "knitr",
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"markdown": "# Exercise Requirements {.unnumbered}\n\n## R Packages\n\nIf you use `{renv}` to manage package dependencies in your projects, you can visit the [GitHub repository](https://github.com/arnold-c/SISMID-Module-02_2025) for this project and download the ***renv.lock***, ***.Rprofile***, and ***renv/activate.R*** files, before running the command `renv::restore()`.\nAlternatively, if you already use GitHub, you could clone the project and just run `renv::restore()`.\n\nIf you would prefer to just install the packages manually to avoid the complications associated with using `{renv}`, you can install the packages printed below.\n\n\n::: {.cell}\n\n```{.r .cell-code}\ninstall.packages(c(\n \"tidyverse\",\n \"deSolve\",\n \"diagram\",\n \"gt\",\n \"ggtext\",\n \"here\",\n \"rio\",\n))\n```\n:::\n\n\n## Data Files\n\nTo complete the exercises, some data files are required.\nThe exercises should load the datafiles via urls, but if you would prefer to download them to your own machine, your are welcome to do so.\nTo download the files, go to the [GitHub repository](https://github.com/arnold-c/SISMID-Module-02_2023) and download the files in the `data/` folder of your repository.\nYou should then uncomment the lines of code that run `... <- rio::import(here::here(\"data\", ...))`, and comment out the lines that include the URLs.\n",
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"markdown": "# Exercise Requirements {.unnumbered}\n\n## R Packages\n\nIf you use `{renv}` to manage package dependencies in your projects, you can visit the [GitHub repository](https://github.com/arnold-c/SISMID-Module-02_2025) for this project and download the ***renv.lock***, ***.Rprofile***, and ***renv/activate.R*** files, before running the command `renv::restore()`.\nAlternatively, if you already use GitHub, you could clone the project and just run `renv::restore()`.\n\nIf you would prefer to just install the packages manually to avoid the complications associated with using `{renv}`, you can install the packages printed below.\n\n\n::: {.cell}\n\n```{.r .cell-code}\ninstall.packages(c(\n \"tidyverse\",\n \"deSolve\",\n \"diagram\",\n \"gt\",\n \"ggtext\",\n \"here\",\n \"rio\"\n))\n```\n:::\n\n\n## Data Files\n\nTo complete the exercises, some data files are required.\nThe exercises should load the datafiles via urls, but if you would prefer to download them to your own machine, your are welcome to do so.\nTo download the files, go to the [GitHub repository](https://github.com/arnold-c/SISMID-Module-02_2025) and download the files in the `data/` folder of your repository.\nYou should then uncomment the lines of code that run `... <- rio::import(here::here(\"data\", ...))`, and comment out the lines that include the URLs.\n",
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"filters": [
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exercise-requirements.qmd

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To complete the exercises, some data files are required.
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The exercises should load the datafiles via urls, but if you would prefer to download them to your own machine, your are welcome to do so.
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To download the files, go to the [GitHub repository](https://github.com/arnold-c/SISMID-Module-02_2023) and download the files in the `data/` folder of your repository.
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To download the files, go to the [GitHub repository](https://github.com/arnold-c/SISMID-Module-02_2025) and download the files in the `data/` folder of your repository.
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You should then uncomment the lines of code that run `... <- rio::import(here::here("data", ...))`, and comment out the lines that include the URLs.

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