UNABLE TO IMPORT SNOMED AFTER INSTALL

[okongwu101]

Hi. So i installed snow-owl using the docker image. The installation appear to be working as i entered this in the prompt:

curl http://localhost:8080/snowowl/admin/info

and got the following response:

{"version":"7.17.3","description":"You Know, for Terminologies","repositories":{"items":[{"id":"snomedStore","health":"GREEN","diagnosis":"","indices":[{"index":"snomedstore-branch","status":"GREEN"},{"index":"snomedstore-review","status":"GREEN"},{"index":"snomedstore-concretedomainchange","status":"GREEN"},{"index":"snomedstore-conceptchange","status":"GREEN"},{"index":"snomedstore-concept","status":"GREEN"},{"index":"snomedstore-equivalentconceptset","status":"GREEN"},{"index":"snomedstore-commit","status":"GREEN"},{"index":"snomedstore-codesystemversion","status":"GREEN"},{"index":"snomedstore-classificationtask","status":"GREEN"},{"index":"snomedstore-conceptchanges","status":"GREEN"},{"index":"snomedstore-constraint","status":"GREEN"},{"index":"snomedstore-relationshipchange","status":"GREEN"},{"index":"snomedstore-description","status":"GREEN"},{"index":"snomedstore-relationship","status":"GREEN"},{"index":"snomedstore-member","status":"GREEN"},{"index":"snomedstore-codesystem","status":"GREEN"},{"index":"snomedstore-descriptionchange","status":"GREEN"}]}]},"cluster":{"available":true,"diagnosis":"","healthy":true,"indices":[{"index":"snomedids-sctid","status":"GREEN"},{"index":"locks-lock","status":"GREEN"},{"index":"validations-validationrule","status":"GREEN"},{"index":"jobs-job","status":"GREEN"},{"index":"validations-validationwhitelist","status":"GREEN"},{"index":"validations-validationissue","status":"GREEN"}]}} .

However when i try to upload snomed using:

curl -X POST http://localhost:8080/snowowl/snomed-ct/v3/imports -d { "type": "SNAPSHOT", "branchPath": "MAIN" }

i get the message

{"status":415,"code":0,"message":"HTTP Media Type application/x-www-form-urlencoded is not supported. Supported media types are: [application/json;charset=UTF-8]","errorCode":0,"statusCode":415}curl: (6) Could not resolve host: type curl: (6) Could not resolve host: SNAPSHOT, curl: (6) Could not resolve host: branchPath curl: (3) [globbing] unmatched close brace/bracket in column 5

** Any help with this is highly appreciated. Thanks.**

[cmark]

Hi @okongwu101,

Thank you for checking out Snow Owl.
It looks like the curl command you have tried missing a few required parameters to work properly.
I recommend using the newer POST /snomed-ct/v3/{path}/import endpoint instead of the deprecated POST /snomed-ct/v3/imports (the latter will be removed in the upcoming 8.x release).

An example curl command to import the latest International RF2 Full from the official release file would look like this:

curl -X POST "http://localhost:8080/snowowl/snomed-ct/v3/MAIN/import?type=Full&createVersions=true" -H "Content-Type: multipart/form-data" -F "file=@/path/to/SnomedCT_InternationalRF2_PRODUCTION_20210731T120000Z.zip" 

I hope this helps.

Regards,
Mark

[okongwu101]

Hi @cmark ,
Thank you for the quick response. Will try it and get back to you.

[okongwu101]

{"status":401,"code":0,"message":"Missing authorization token","developerMessage":"Missing authorization token","statusCode":401,"errorCode":0}

That was the error message i got. How do i acquire the authorization code? Any guide on how to use it? Thanks in advance.

[cmark]

Did you set up any form of authorization? If no then the default file-based authorization is in place with a single default user username: snowowl, pass: snowowl. (for production deploys please use a strong password or configure LDAP-based authorization).
You can use the Base64 encoded form of the username:password string in a header when you send any HTTP request to Snow Owl:

curl .... -H "Authorization: Basic c25vd293bDpzbm93b3ds" ...

I hope this helps. Documentation can be found here, how ever regarding API usage we don't have a detailed documentation publicly available yet (it is expected to come in the coming weeks though)

[okongwu101]

Worked ! Thanks a lot. Up to the next brick wall.

[cmark]

Hi @okongwu101,

Do you still experience issues with your RF2 import? Have you been able to import any RF2 content successfully into your installation?

Cheers,
Mark

[cmark]

Converting to discussion...