(Homekit2020) jovyan@jupyter-mnodini-40ucsd-2eedu:~/Homekit2020$ python3 src/models/train.py fit `# Main entry point` \
> --config configs/tasks/HomekitPredictFluPos.yaml `# Configures the task`\
> --config configs/models/CNNToTransformerClassifier.yaml `# Configures the model`\
> --data.train_path $PWD/data/processed/split/audere_split_2020_02_10/train_7_day `# Train data location`\
> --data.val_path $PWD/data/processed/split/audere_split_2020_02_10/eval_7_day `# Validation data location`\
>
Global seed set to 999
09/02/2022 21:40:15 - INFO - src.data.utils - Reading lab_results_with_triggerdate...
Traceback (most recent call last):
File "/home/jovyan/Homekit2020/src/models/train.py", line 200, in <module>
cli = CLI(trainer_defaults=trainer_defaults,
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/pytorch_lightning/utilities/cli.py", line 157, in __init__
super().__init__(*args, **kwargs)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/pytorch_lightning/cli.py", line 347, in __init__
self.instantiate_classes()
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/pytorch_lightning/cli.py", line 483, in instantiate_classes
self.config_init = self.parser.instantiate_classes(self.config)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/jsonargparse/deprecated.py", line 127, in patched_instantiate_classes
cfg = self._unpatched_instantiate_classes(cfg, **kwargs)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/jsonargparse/core.py", line 1089, in instantiate_classes
cfg[subcommand] = subparser.instantiate_classes(cfg[subcommand], instantiate_groups=instantiate_groups)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/jsonargparse/deprecated.py", line 127, in patched_instantiate_classes
cfg = self._unpatched_instantiate_classes(cfg, **kwargs)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/jsonargparse/core.py", line 1080, in instantiate_classes
parent[key] = component.instantiate_classes(value)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/jsonargparse/typehints.py", line 399, in instantiate_classes
value[num] = adapt_typehints(val, self._typehint, instantiate_classes=True, sub_add_kwargs=sub_add_kwargs)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/jsonargparse/typehints.py", line 645, in adapt_typehints
val = adapt_class_type(val, serialize, instantiate_classes, sub_add_kwargs, prev_val=prev_val)
File "/opt/conda/envs/Homekit2020/lib/python3.9/site-packages/jsonargparse/typehints.py", line 808, in adapt_class_type
return val_class(**{**init_args, **dict_kwargs})
File "/home/jovyan/Homekit2020/src/models/tasks.py", line 496, in __init__
ActivityTask.__init__(self, fields=fields, activity_level=activity_level,**kwargs)
File "/home/jovyan/Homekit2020/src/models/tasks.py", line 349, in __init__
self.data_shape = (int(data_length),len(self.fields))
TypeError: int() argument must be a string, a bytes-like object or a number, not 'NoneType'
