## include - only include apps that fail on the default branch | repo | dockerhub | status | | - | - | - | | [cpac](https://github.com/bids-apps/CPAC) | https://hub.docker.com/r/bids/c-pac/tags | 🚫 Runs but does not do anything: https://github.com/bids-apps/CPAC/actions/runs/5019946870/jobs/9000962724 | | [hcppipelines](https://github.com/bids-apps/hcppipelines) | https://hub.docker.com/r/bids/hcppipelines/tags | ❓ image too big to run on github ; 🚫 in circle ci missing metadata in data to run | | [nipypelines](https://github.com/bids-apps/nipypelines) | https://hub.docker.com/r/bids/nipypelines/tags || | [oppni](https://github.com/bids-apps/oppni) | https://hub.docker.com/r/bids/oppni/tags | 🚫 latest version fails in CI: https://github.com/bids-apps/oppni/issues/28 | | [mindboggle](https://github.com/bids-apps/mindboggle) | https://hub.docker.com/r/bids/mindboggle/tags | ❓ Test takes more than 6 hours: https://github.com/bids-apps/mindboggle/pull/23 | | [ndmg](https://github.com/bids-apps/ndmg) | https://hub.docker.com/r/bids/ndmg/tags | ✅ seems to work 🚀 https://github.com/bids-apps/ndmg/actions/runs/5033670590/jobs/9028039284 | | [afni_proc](https://github.com/bids-apps/afni_proc)| https://hub.docker.com/r/bids/afni_proc/tags | ✅ seems to work 🚀 https://github.com/bids-apps/afni_proc/actions/runs/5026514966 | | [magetbrain](https://github.com/bids-apps/MAGeTbrain) | https://hub.docker.com/r/bids/magetbrain/tags | 🚫 latest version fails in CI: https://github.com/bids-apps/MAGeTbrain/pull/13 ; checked with developper and this app will be rewritten | | [aa](https://github.com/bids-apps/aa) | https://hub.docker.com/r/bids/aa/tags | 🚫 cannot run in github CI | | [tracula](https://github.com/bids-apps/tracula) | https://hub.docker.com/r/bids/tracula/tags | WIP. participant level tested and so far it works. https://github.com/bids-apps/tracula/pull/33 | | [baracus](https://github.com/bids-apps/baracus) | https://hub.docker.com/r/bids/baracus/tags | | | [mrtrix3_connectome](https://github.com/bids-apps/MRtrix3_connectome) | https://hub.docker.com/r/bids/mrtrix3_connectome | Some part of the workflow seem to fail at the moment :https://github.com/bids-apps/MRtrix3_connectome/pull/124 | | [dparsf](https://github.com/bids-apps/DPARSF) | https://hub.docker.com/r/bids/dparsf/tags | ✅ seems to work 🚀. See logs here: https://github.com/bids-apps/DPARSF/pull/15#issuecomment-1557551113 | | [freesurfer](https://github.com/bids-apps/freesurfer) | https://hub.docker.com/r/bids/freesurfer | ✅ as far as I can tell this works: see log of CI run here: https://github.com/bids-apps/freesurfer/pull/73#issuecomment-1555909009 | ## exclude | name | reason | |-|-| | hyperalignement | no latest tag: https://hub.docker.com/r/bids/hyperalignment/tags | | qap | no latest tag: https://hub.docker.com/r/bids/qap/tags | | [FibreDensityAndCrosssection](https://github.com/bids-apps/FibreDensityAndCrosssection) | Unmaintainted | | [niak](https://github.com/bids-apps/niak) | Unmaintainted | |[BROCCOLI](https://github.com/bids-apps/BROCCOLI)| missing test data: https://github.com/bids-apps/BROCCOLI/issues/13| |[SyntheticDiffusion](https://github.com/bids-apps/SyntheticDiffusion)| missing test data: https://github.com/bids-apps/SyntheticDiffusion/issues/1| | [rsHRF](https://github.com/bids-apps/rsHRF) | does not run on typical fmriprep data |
include
exclude