Python application

Merge pull request #556 from bigbio/dev #767

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Run time

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Job	Run time
setup	1m 3s
test_mzid_mzML	20m 55s
test_tmt	15m 2s
test_diann	1m 22s
test_maxquant	1m 22s
test_lfq	13m 53s
test_mzid_mgf	2m 10s
test_dia	1m 37s
test_proteobench	2m 27s
test_maxquant_dia	1m 27s
test_fragpipe	1m 9s
	1h 2m 27s