pmultiqc/docs/config.json at e13caa833381fba7f2e441ef6e30ef26ca1be3ca · bigbio/pmultiqc · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
{
    "projects": [
        {
            "accession": "LFQ_PXD007683",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/LFQ_PXD007683.zip"
            ],
            "path": "docs/LFQ_PXD007683",
            "file_type": ["lfq", ""]
        },
        {
            "accession": "LFQ_PXD007683_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/LFQ_PXD007683.zip"
            ],
            "path": "docs/LFQ_PXD007683_disable_hoverinfo",
            "file_type": ["lfq", "disable_hoverinfo"]
        },
        {
            "accession": "dia",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/dia/dia.zip"
            ],
            "path": "docs/dia",
            "file_type": ["dia", ""]
        },
        {
            "accession": "dia_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/dia/dia.zip"
            ],
            "path": "docs/dia_disable_hoverinfo",
            "file_type": ["dia", "disable_hoverinfo"]
        },
        {
            "accession": "DIANN",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/PXD063291.zip"
            ],
            "path": "docs/DIANN",
            "file_type": ["diann", ""]
        },
        {
            "accession": "DIANN_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/PXD063291.zip"
            ],
            "path": "docs/DIANN_disable_hoverinfo",
            "file_type": ["diann", "disable_hoverinfo"]
        },
        {
            "accession": "TMT_PXD007683",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/TMT_PXD007683.zip"
            ],
            "path": "docs/TMT_PXD007683",
            "file_type": ["tmt", ""]
        },
        {
            "accession": "TMT_PXD007683_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/TMT_PXD007683.zip"
            ],
            "path": "docs/TMT_PXD007683_disable_hoverinfo",
            "file_type": ["tmt", "disable_hoverinfo"]
        },
        {
            "accession": "PXD003133",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2015/11/PXD003133/txt_20min.zip"
            ],
            "path": "docs/PXD003133",
            "file_type": ["maxquant", ""]
        },
        {
            "accession": "PXD003133_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2015/11/PXD003133/txt_20min.zip"
            ],
            "path": "docs/PXD003133_disable_hoverinfo",
            "file_type": ["maxquant", "disable_hoverinfo"]
        },
        {
            "accession": "MaxDIA",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/maxquant/MaxDIA_txt.zip"
            ],
            "path": "docs/MaxDIA",
            "file_type": ["maxquant", ""]
        },
        {
            "accession": "MaxDIA_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/maxquant/MaxDIA_txt.zip"
            ],
            "path": "docs/MaxDIA_disable_hoverinfo",
            "file_type": ["maxquant", "disable_hoverinfo"]
        },
        {
            "accession": "ProteoBench",
            "urls": [
                "https://proteobench.cubimed.rub.de/datasets/d01e87b997b84c985868204b1ed26749902fd7f9/d01e87b997b84c985868204b1ed26749902fd7f9_data.zip"
            ],
            "path": "docs/ProteoBench",
            "file_type": ["proteobench", ""]
        },
        {
            "accession": "ProteoBench_disable_hoverinfo",
            "urls": [
                "https://proteobench.cubimed.rub.de/datasets/d01e87b997b84c985868204b1ed26749902fd7f9/d01e87b997b84c985868204b1ed26749902fd7f9_data.zip"
            ],
            "path": "docs/ProteoBench_disable_hoverinfo",
            "file_type": ["proteobench", "disable_hoverinfo"]
        },
        {
            "accession": "PXD054720",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001234.mgf",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001234.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001235.mgf",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001235.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001236.mgf",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001236.mzid.gz"
            ],
            "path": "docs/PXD054720",
            "file_type": ["mzid", ""]
        },
        {
            "accession": "PXD054720_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001234.mgf",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001234.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001235.mgf",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001235.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001236.mgf",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD054720/F001236.mzid.gz"
            ],
            "path": "docs/PXD054720_disable_hoverinfo",
            "file_type": ["mzid", "disable_hoverinfo"]
        },
        {
            "accession": "PXD053068",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/F10854.mzML",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/F10854.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/Q00745.mzML",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/Q00745.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/cGAS.mzML",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/cGAS.mzid.gz"
            ],
            "path": "docs/PXD053068",
            "file_type": ["mzid", ""]
        },
        {
            "accession": "PXD053068_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/F10854.mzML",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/F10854.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/Q00745.mzML",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/Q00745.mzid.gz",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/cGAS.mzML",
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD053068/cGAS.mzid.gz"
            ],
            "path": "docs/PXD053068_disable_hoverinfo",
            "file_type": ["mzid", "disable_hoverinfo"]
        },
        {
            "accession": "PXD062399",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/PXD062399.zip"
            ],
            "path": "docs/PXD062399",
            "file_type": ["fragpipe", ""]
        },
        {
            "accession": "PXD062399_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/PXD062399.zip"
            ],
            "path": "docs/PXD062399_disable_hoverinfo",
            "file_type": ["fragpipe", "disable_hoverinfo"]
        },
        {
            "accession": "PXD062383",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/PXD062383.zip"
            ],
            "path": "docs/PXD062383",
            "file_type": ["dia", ""]
        },
        {
            "accession": "PXD062383_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/example-projects/PXD062383.zip"
            ],
            "path": "docs/PXD062383_disable_hoverinfo",
            "file_type": ["dia", "disable_hoverinfo"]
        },
        {
            "accession": "PXD053464",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD053464/03_SingleCell_Searches.zip"
            ],
            "path": "docs/PXD053464",
            "file_type": ["diann", ""]
        },
        {
            "accession": "PXD053464_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD053464/03_SingleCell_Searches.zip"
            ],
            "path": "docs/PXD053464_disable_hoverinfo",
            "file_type": ["diann", "disable_hoverinfo"]
        },
        {
            "accession": "mhcquant",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/mhcquant/mhcquant_3-1-0_results.zip"
            ],
            "path": "docs/mhcquant",
            "file_type": ["mhcquant", ""]
        },
        {
            "accession": "mhcquant_disable_hoverinfo",
            "urls": [
                "https://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/pmultiqc/mhcquant/mhcquant_3-1-0_results.zip"
            ],
            "path": "docs/mhcquant_disable_hoverinfo",
            "file_type": ["mhcquant", "disable_hoverinfo"]
        },
        {
            "accession": "qpx",
            "urls": [
                "https://github.com/user-attachments/files/31028778/qpx_example.zip"
            ],
            "path": "docs/qpx",
            "file_type": ["qpx", ""]
        },
        {
            "accession": "qpx_disable_hoverinfo",
            "urls": [
                "https://github.com/user-attachments/files/31028778/qpx_example.zip"
            ],
            "path": "docs/qpx_disable_hoverinfo",
            "file_type": ["qpx", "disable_hoverinfo"]
        }
    ]
}