JDBetteridge/Composite actions #209
Workflow file for this run
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| name: Jupyter Notebooks | |
| permissions: | |
| contents: read | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| # Trigger the workflow on push or pull request, | |
| # but only for the main branch | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| tutorials-basic: | |
| name: ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| DEVITO_ARCH: "${{ matrix.compiler }}" | |
| DEVITO_LANGUAGE: ${{ matrix.language }} | |
| strategy: | |
| # Prevent all build to stop if a single one fails | |
| fail-fast: false | |
| matrix: | |
| name: [ | |
| tutos-ubuntu-gcc-py310, | |
| tutos-osx-clang-py311 | |
| ] | |
| include: | |
| - name: tutos-ubuntu-gcc-py310 | |
| os: ubuntu-latest | |
| compiler: gcc | |
| language: "openmp" | |
| python-version: "3.10" | |
| - name: tutos-osx-clang-py311 | |
| os: macos-latest | |
| compiler: clang | |
| language: "C" | |
| python-version: "3.11" | |
| steps: | |
| - name: Checkout devito | |
| uses: actions/checkout@v6 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v6 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: maxim-lobanov/setup-xcode@v1 | |
| if: runner.os == 'macOS' | |
| with: | |
| xcode-version: latest-stable | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e ".[tests,extras]" | |
| pip install blosc | |
| - name: Seismic notebooks | |
| run: | | |
| pytest --nbval -k 'not dask' -k 'not synthetics' examples/seismic/tutorials/ | |
| pytest --nbval examples/seismic/acoustic/accuracy.ipynb | |
| - name: Failing notebooks | |
| continue-on-error: true | |
| run: | | |
| pytest --nbval examples/seismic/tutorials/14_creating_synthetics.ipynb | |
| - name: Dask notebooks | |
| if: runner.os != 'macOS' | |
| run: | | |
| pytest --nbval examples/seismic/tutorials/*dask*.ipynb | |
| - name: Self-adjoint notebooks | |
| run: | | |
| pytest --nbval examples/seismic/self_adjoint/ | |
| - name: CFD notebooks | |
| run: | | |
| pytest --nbval examples/cfd | |
| - name: User api notebooks | |
| run: | | |
| pytest --nbval examples/userapi | |
| - name: Compiler notebooks | |
| run: | | |
| pytest --nbval examples/compiler | |
| - name: Finance notebooks | |
| run: | | |
| pytest --nbval examples/finance | |
| - name: Performance notebooks | |
| run: | | |
| pytest --nbval examples/performance | |
| - name: ABC Notebooks | |
| run: | | |
| pytest --nbval examples/seismic/abc_methods | |
| - name: Timestepping Notebooks | |
| run: | | |
| pytest --nbval examples/timestepping | |
| tutorials-docker: | |
| name: ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| DEVITO_ARCH: "${{ matrix.compiler }}" | |
| DEVITO_LANGUAGE: ${{ matrix.language }} | |
| strategy: | |
| # Prevent all build to stop if a single one fails | |
| fail-fast: false | |
| matrix: | |
| name: [ | |
| tutos-docker-gcc-py310 | |
| ] | |
| include: | |
| - name: tutos-docker-gcc-py310 | |
| os: ubuntu-latest | |
| compiler: gcc | |
| language: "openmp" | |
| python-version: "3.10" | |
| steps: | |
| - name: Checkout devito | |
| uses: actions/checkout@v6 | |
| - id: build | |
| name: Build docker image | |
| uses: ./.github/actions/docker-build | |
| with: | |
| file: docker/Dockerfile.devito | |
| tag: ${{ matrix.name }} | |
| - name: Get the Docker image Python version | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| command: > | |
| python3 --version | grep "Python " | cut -d' ' -f2 | cut -d'.' -f1,2 > dockerpythonversion.txt | |
| - name: Check Docker image Python version | |
| run: | | |
| declared_pyver="${{ matrix.python-version }}" | |
| actual_pyver=$(cat dockerpythonversion.txt) | |
| echo "Declared Python version: $declared_pyver" | |
| echo "Actual Python version: $actual_pyver" | |
| if [ "$declared_pyver" != "$actual_pyver" ]; then | |
| echo "Python version mismatch: declared $declared_pyver, image has $actual_pyver" | |
| exit 1 | |
| fi | |
| - name: Test seismic notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest \ | |
| --nbval \ | |
| -k 'not dask' \ | |
| -k 'not synthetics' \ | |
| examples/seismic/tutorials/ | |
| - name: Test seismic accuracy notebook | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/seismic/acoustic/accuracy.ipynb | |
| - name: Failing notebooks | |
| continue-on-error: true | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/seismic/tutorials/14_creating_synthetics.ipynb | |
| - name: Dask notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/seismic/tutorials/*dask*.ipynb | |
| - name: Self-adjoint notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/seismic/self_adjoint/ | |
| - name: CFD notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/cfd | |
| - name: User api notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/userapi | |
| - name: Compiler notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/compiler | |
| - name: Finance notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/finance | |
| - name: Performance notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/performance | |
| - name: ABC Notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/seismic/abc_methods | |
| - name: Timestepping Notebooks | |
| uses: ./.github/actions/docker-run | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} | |
| env: | | |
| CI=true | |
| CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }} | |
| DEVITO_LOGGING=DEBUG | |
| PYTHONFAULTHANDLER=1 | |
| command: | | |
| pytest --nbval examples/timestepping | |
| - name: Cleanup docker image | |
| if: always() | |
| uses: ./.github/actions/docker-clean | |
| with: | |
| uid: ${{ steps.build.outputs.unique }} | |
| tag: ${{ matrix.name }} |