From b1debe6d74c7bcf36e9ebd36d18283e25dc8b2a0 Mon Sep 17 00:00:00 2001 From: Jacob Roberts Date: Wed, 22 Apr 2020 09:11:37 -0400 Subject: [PATCH] Update README. README was set to _dis_tab in May 2018 https://github.com/ding-lab/msisensor/commit/290271a1e6d369d701f4dcbf08f87569aeea7369, then the code was changed to output _dis in June 2018 https://github.com/ding-lab/msisensor/commit/38bc6549cd8ca119e562116897da6e529b3ed940 --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index c2d3095..9fe4fbe 100644 --- a/README.md +++ b/README.md @@ -104,7 +104,7 @@ Output The list of microsatellites is output in "scan" step. The MSI scoring step produces 4 files: output.prefix - output.prefix_dis_tab + output.prefix_dis output.prefix_germline output.prefix_somatic @@ -122,7 +122,7 @@ The list of microsatellites is output in "scan" step. The MSI scoring step produ Total_Number_of_Sites Number_of_Somatic_Sites % 640 75 11.72 -3. output.prefix_dis_tab: read count distribution (N: normal; T: tumor) +3. output.prefix_dis: read count distribution (N: normal; T: tumor) 1 16248728 ACCTC 11 T AAAGG N 0 0 0 0 1 38 0 0 0 0 0 0 0 1 16248728 ACCTC 11 T AAAGG T 0 0 0 0 17 22 1 0 0 0 0 0 0