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annotation_files and clustal_alignment function errors #5

@chagas98

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@chagas98

The function annotation_files has a wrong filepath for output files. I think the best workaround is replace string "temp" with the variable outdir in the def annotation_files()

The functionclustal_alignment has get_cmd("clustalw") giving an error when running clustal. A tip is replace "clustalw" with "clustalw2".

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