Merge pull request #895 from planemo-autoupdate/workflows/microbiome/mags-building

Updating workflows/microbiome/mags-building from 0.2 to 0.3

Author: mvdbeek

workflows/microbiome/mags-building/CHANGELOG.md

@@ -1,5 +1,10 @@
 # Changelog
 
+## [0.3] - 2025-06-09
+
+### Automatic update
+- `toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.5+galaxy0` was updated to `toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.5+galaxy2`
+
 ## [0.2] - 2025-05-19
 
 ### Automatic update

workflows/microbiome/mags-building/MAGs-generation.ga

@@ -1882,7 +1882,7 @@
         },
         "44": {
             "annotation": "",
-            "content_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.5+galaxy0",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.5+galaxy2",
             "errors": null,
             "id": 44,
             "input_connections": {
@@ -1905,15 +1905,15 @@
                 "top": 20
             },
             "post_job_actions": {},
-            "tool_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.5+galaxy0",
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.5+galaxy2",
             "tool_shed_repository": {
-                "changeset_revision": "6073bb457ec0",
+                "changeset_revision": "c41d78ae5fee",
                 "name": "text_processing",
                 "owner": "bgruening",
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             },
-            "tool_state": "{\"code\": \"BEGIN {OFS=\\\"\\\\t\\\"; print \\\"genome\\\\tcompleteness\\\\tcontamination\\\"} \\nNR > 1 {\\n    if ($1 !~ /\\\\.fasta$/) \\n        $1 = $1 \\\".fasta\\\"\\n    print $1, $2, $3\\n}\", \"infile\": {\"__class__\": \"ConnectedValue\"}, \"__page__\": 0, \"__rerun_remap_job_id__\": null}",
-            "tool_version": "9.5+galaxy0",
+            "tool_state": "{\"code\": \"BEGIN {OFS=\\\"\\\\t\\\"; print \\\"genome\\\\tcompleteness\\\\tcontamination\\\"} \\nNR > 1 {\\n    if ($1 !~ /\\\\.fasta$/) \\n        $1 = $1 \\\".fasta\\\"\\n    print $1, $2, $3\\n}\", \"infile\": {\"__class__\": \"ConnectedValue\"}, \"variables\": [], \"__page__\": 0, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "9.5+galaxy2",
             "type": "tool",
             "uuid": "aebd1724-8c8e-43ff-bcfe-78356bf04b3b",
             "when": null,
@@ -2570,7 +2570,7 @@
     "tags": [
         "name:FAIRyMAGs"
     ],
-    "uuid": "73feba42-8a6c-4b16-b56d-9299d74a252f",
+    "uuid": "e4e70fc0-b584-4e86-8b8f-c6bcdda2e11a",
     "version": 1,
-    "release": "0.2"
+    "release": "0.3"
 }