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David Liu
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update test datasets to include omero data
1 parent b8d0f48 commit 6b4ac87

10 files changed

Lines changed: 199 additions & 3 deletions

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‎testdata/datasource/zarr/ome_zarr/simple_0.4/.zattrs‎

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@@ -76,5 +76,21 @@
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"version": "0.4",
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"@type": "ngff:Image"
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}
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]
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],
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"omero": {
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"channels": [
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{
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"label": "channelA",
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"color": "0000FF",
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"active": true,
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"window": { "min": 0, "max": 65535, "start": 0, "end": 1000 }
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},
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{
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"label": "channelB",
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"color": "00FF00",
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"active": false,
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"window": { "min": 0, "max": 65535, "start": 100, "end": 5000 }
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}
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]
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}
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}

testdata/datasource/zarr/ome_zarr/simple_0.5.ocdbt/d/fec48405bb5555365258cfe94824e8a9 renamed to testdata/datasource/zarr/ome_zarr/simple_0.5.ocdbt/d/da7f74200a36aec2c0d89ab7eaf465ea

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‎testdata/datasource/zarr/ome_zarr/simple_0.5.ocdbt/manifest.ocdbt‎

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‎testdata/datasource/zarr/ome_zarr/simple_0.5.zip‎

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‎testdata/datasource/zarr/ome_zarr/simple_0.5/zarr.json‎

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@@ -78,7 +78,23 @@
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"name": "image",
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"@type": "ngff:Image"
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}
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]
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],
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"omero": {
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"channels": [
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{
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"label": "channelA",
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"color": "0000FF",
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"active": true,
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"window": { "min": 0, "max": 65535, "start": 0, "end": 1000 }
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},
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{
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"label": "channelB",
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"color": "00FF00",
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"active": false,
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"window": { "min": 0, "max": 65535, "start": 100, "end": 5000 }
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}
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]
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}
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}
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},
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"zarr_format": 3,

‎tests/datasource/metadata_snapshots/zarr/ome_zarr_simple_0.4.snapshot‎

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{
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"canonicalUrl": "http://localhost:*/datasource/zarr/ome_zarr/simple_0.4/|zarr2:",
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"channelMetadata": {
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"channels": [
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{
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"active": true,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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0,
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1,
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],
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"label": "channelA",
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"range": [
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0,
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1000,
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],
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"window": [
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0,
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65535,
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],
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},
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{
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"active": false,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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1,
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0,
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],
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"label": "channelB",
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"range": [
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100,
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5000,
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],
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"window": [
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0,
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65535,
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],
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},
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],
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"name": undefined,
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},
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"modelTransform": {
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"inputSpace": {
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"bounds": {

‎tests/datasource/metadata_snapshots/zarr/ome_zarr_simple_0.5.ocdbt.snapshot‎

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{
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"canonicalUrl": "http://localhost:*/datasource/zarr/ome_zarr/simple_0.5.ocdbt/|ocdbt:|zarr3:",
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"channelMetadata": {
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"channels": [
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{
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"active": true,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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0,
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1,
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],
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"label": "channelA",
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"range": [
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0,
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1000,
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],
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"window": [
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0,
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65535,
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],
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},
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{
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"active": false,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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1,
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0,
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],
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"label": "channelB",
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"range": [
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100,
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5000,
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],
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"window": [
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0,
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65535,
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],
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},
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],
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"name": undefined,
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},
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"modelTransform": {
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"inputSpace": {
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"bounds": {

‎tests/datasource/metadata_snapshots/zarr/ome_zarr_simple_0.5.snapshot‎

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{
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"canonicalUrl": "http://localhost:*/datasource/zarr/ome_zarr/simple_0.5/|zarr3:",
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"channelMetadata": {
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"channels": [
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{
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"active": true,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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0,
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1,
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],
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"label": "channelA",
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"range": [
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0,
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1000,
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],
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"window": [
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0,
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65535,
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],
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},
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{
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"active": false,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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1,
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0,
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],
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"label": "channelB",
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"range": [
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100,
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5000,
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],
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"window": [
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0,
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65535,
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],
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},
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],
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"name": undefined,
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},
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"modelTransform": {
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"inputSpace": {
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"bounds": {

‎tests/datasource/metadata_snapshots/zarr/ome_zarr_simple_0.5.zip.snapshot‎

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{
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"canonicalUrl": "http://localhost:*/datasource/zarr/ome_zarr/simple_0.5.zip|zip:|zarr3:",
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"channelMetadata": {
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"channels": [
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{
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"active": true,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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0,
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1,
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],
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"label": "channelA",
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"range": [
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0,
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1000,
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],
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"window": [
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0,
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65535,
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],
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},
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{
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"active": false,
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"coefficient": undefined,
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"color": Float32Array [
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0,
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1,
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0,
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],
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"label": "channelB",
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"range": [
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100,
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5000,
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],
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"window": [
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0,
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65535,
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],
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},
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],
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"name": undefined,
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},
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"modelTransform": {
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"inputSpace": {
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"bounds": {

‎tests/datasource/test_util.ts‎

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@@ -41,7 +41,7 @@ export function getDatasourceSnapshot(datasource: DataSource) {
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datasource.modelTransform,
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),
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canonicalUrl: redactUrl(datasource.canonicalUrl),
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...getKeys(datasource, ["canChangeModelSpaceRank"]),
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...getKeys(datasource, ["canChangeModelSpaceRank", "channelMetadata"]),
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};
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}
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