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Merge pull request #1442 from haddocking/Prot-ON
Added permanent link for Prot-ON results
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notebooks/HADDOCK3-antibody-antigen.ipynb

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"metadata": {
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"colab": {
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"provenance": [],
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"gpuType": ""
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"gpuType": "V5E1"
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},
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"kernelspec": {
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"name": "python3",
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"\n",
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"Here we will use PROT-ON to analyse the interface of our antibody-antigen complex. For that, we will use the provided matched reference structure (`4G6M-matched.pdb`) in which both chains of the antibody have the same chainID (A), which allows us to analyse all interface residues of the antibody at once.\n",
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"\n",
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"__Note:__ Pre-calculated PROT-ON results for this system can be accessed [here](http://proton.tools.ibg.edu.tr:8001/result/ebcdec31308c46acb82e8010f7f21df1).\n",
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"__Note:__ Pre-calculated PROT-ON results for this system can be accessed [here](http://proton.tools.ibg.edu.tr:8001/result/4G6M_matched_chain_A_EvoEF1).\n",
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"\n",
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"\n",
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"Connect to the PROT-ON server page (link above) and fill in the following fields:\n",
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"outputs": []
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}
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]
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}
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}

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