Tests

bugfix: specify bandwidth during KDE initialization #7

	name: Tests

	on:
	push:
	branches: [master, main]
	pull_request:
	branches: [master, main]

	permissions:
	contents: read

	jobs:
	test:
	name: Python ${{ matrix.python-version }} on ${{ matrix.os }}
	runs-on: ${{ matrix.os }}
	strategy:
	fail-fast: false
	matrix:
	os: [ubuntu-latest, macos-latest, windows-latest]
	python-version: ["3.11", "3.12", "3.13"]

	steps:
	- uses: actions/checkout@v4

	- name: Install uv
	uses: astral-sh/setup-uv@v4
	with:
	enable-cache: true
	cache-dependency-glob: "uv.lock"

	- name: Set up Python ${{ matrix.python-version }}
	run: uv python install ${{ matrix.python-version }}

	- name: Install dependencies
	run: uv sync --dev

	- name: Run tests with coverage
	run: uv run pytest --cov=intensity_normalization --cov-report=xml --cov-report=term-missing

	- name: Upload coverage to Codecov
	if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.12'
	uses: codecov/codecov-action@v4
	with:
	token: ${{ secrets.CODECOV_TOKEN }}
	file: ./coverage.xml
	fail_ci_if_error: false

	lint:
	name: Lint
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4

	- name: Install uv
	uses: astral-sh/setup-uv@v4
	with:
	enable-cache: true
	cache-dependency-glob: "uv.lock"

	- name: Set up Python
	run: uv python install 3.12

	- name: Install dependencies
	run: uv sync --dev

	- name: Run ruff format check
	run: uv run ruff format --check src/

	- name: Run ruff linter
	run: uv run ruff check src/

	- name: Run mypy
	run: uv run mypy src/intensity_normalization/

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