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Revert environment-exact-win64.yml back to Heidi's version
Seems like any exact environment from my computer makes for very slow predictions on other computers.
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environment-exact-win64.yml

Lines changed: 58 additions & 71 deletions
Original file line numberDiff line numberDiff line change
@@ -7,66 +7,61 @@ dependencies:
77
- _openmp_mutex=4.5=2_gnu
88
- absl-py=2.3.1=pyhd8ed1ab_0
99
- aicspylibczi=3.3.1=py311h3e6a449_2
10-
- annotated-types=0.7.0=pyhd8ed1ab_1
1110
- aom=3.9.1=he0c23c2_0
1211
- autograd=1.8.0=pyhd8ed1ab_0
1312
- autograd-gamma=0.5.0=pyhd8ed1ab_1
1413
- blosc=1.21.6=hfd34d9b_1
15-
- brotli=1.2.0=h2d644bc_1
16-
- brotli-bin=1.2.0=hfd05255_1
14+
- brotli=1.2.0=h17ff524_0
15+
- brotli-bin=1.2.0=h6910e44_0
1716
- bzip2=1.0.8=h0ad9c76_8
18-
- c-blosc2=2.22.0=h2af8807_1
17+
- c-blosc2=2.22.0=h3cf07e4_0
1918
- ca-certificates=2025.11.12=h4c7d964_0
2019
- cached-property=1.5.2=hd8ed1ab_1
2120
- cached_property=1.5.2=pyha770c72_1
2221
- cairo=1.18.4=h5782bbf_0
2322
- charls=2.4.2=h1537add_0
24-
- click=8.3.1=pyha7b4d00_1
2523
- colorama=0.4.6=pyhd8ed1ab_1
2624
- contourpy=1.3.3=py311h3fd045d_3
25+
- crc32c=2.8=py311hf893f09_1
2726
- cuda-cudart=12.9.79=he0c23c2_0
2827
- cuda-cudart_win-64=12.9.79=he0c23c2_0
2928
- cuda-cupti=12.9.79=hac47afa_1
3029
- cuda-nvrtc=12.9.86=hac47afa_1
3130
- cuda-version=12.9=h4f385c5_3
3231
- cudnn=9.10.2.21=h32ff316_0
33-
- cycler=0.12.1=pyhcf101f3_2
32+
- cycler=0.12.1=pyhd8ed1ab_1
3433
- dav1d=1.2.1=hcfcfb64_0
3534
- deprecated=1.3.1=pyhd8ed1ab_0
3635
- donfig=0.8.1.post1=pyhd8ed1ab_1
37-
- double-conversion=3.4.0=hac47afa_0
36+
- double-conversion=3.3.1=he0c23c2_0
3837
- dpct=1.3.0.1.post11=py311h926c15e_0
39-
- filelock=3.20.1=pyhd8ed1ab_0
40-
- fmt=12.0.0=h29169d4_0
38+
- filelock=3.20.0=pyhd8ed1ab_0
4139
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
4240
- font-ttf-inconsolata=3.000=h77eed37_0
4341
- font-ttf-source-code-pro=2.038=h77eed37_0
4442
- font-ttf-ubuntu=0.83=h77eed37_3
4543
- fontconfig=2.15.0=h765892d_1
4644
- fonts-conda-ecosystem=1=0
4745
- fonts-conda-forge=1=hc364b38_1
48-
- fonttools=4.61.1=py311h3f79411_0
46+
- fonttools=4.60.1=py311h3f79411_0
4947
- formulaic=1.2.1=pyhd8ed1ab_2
5048
- freetype=2.14.1=h57928b3_0
51-
- fsspec=2025.12.0=pyhd8ed1ab_0
52-
- geff=1.1.4.1.1=pyhcf101f3_0
53-
- geff-spec=1.1.1=pyhcf101f3_0
49+
- fsspec=2025.10.0=pyhd8ed1ab_0
5450
- giflib=5.2.2=h64bf75a_0
5551
- glpk=5.0=h8ffe710_0
56-
- google-crc32c=1.8.0=py311h178015e_0
5752
- graphite2=1.3.14=hac47afa_2
58-
- h5py=3.15.1=nompi_py311hc40ba4b_101
53+
- h5py=3.15.1=nompi_py311hc40ba4b_100
5954
- harfbuzz=12.2.0=h5f2951f_0
60-
- hdf5=1.14.6=nompi_h89f0904_104
55+
- hdf5=1.14.6=nompi_he30205f_103
6156
- icu=75.1=he0c23c2_0
62-
- imagecodecs=2025.11.11=py311h956b223_1
57+
- imagecodecs=2025.11.11=py311haf4ede9_0
6358
- imageio=2.37.0=pyhfb79c49_0
6459
- importlib-metadata=8.7.0=pyhe01879c_1
6560
- interface_meta=1.3.0=pyhd8ed1ab_1
66-
- jinja2=3.1.6=pyhcf101f3_1
67-
- joblib=1.5.3=pyhd8ed1ab_0
61+
- jinja2=3.1.6=pyhd8ed1ab_0
62+
- joblib=1.5.2=pyhd8ed1ab_0
6863
- jxrlib=1.1=hcfcfb64_3
69-
- keras=3.12.0=pyh753f3f9_0
64+
- keras=3.11.2=pyh753f3f9_0
7065
- kiwisolver=1.4.9=py311h275cad7_2
7166
- krb5=1.21.3=hdf4eb48_0
7267
- lazy-loader=0.4=pyhd8ed1ab_2
@@ -76,48 +71,47 @@ dependencies:
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- libabseil=20250512.1=cxx17_habfad5f_0
7772
- libaec=1.1.4=h20038f6_0
7873
- libavif16=1.3.0=he916da2_2
79-
- libblas=3.11.0=5_hf2e6a31_mkl
74+
- libblas=3.11.0=1_hf2e6a31_mkl
8075
- libboost=1.86.0=h9dfe17d_4
8176
- libboost-python=1.86.0=py311h05ac4f6_4
82-
- libbrotlicommon=1.2.0=hfd05255_1
83-
- libbrotlidec=1.2.0=hfd05255_1
84-
- libbrotlienc=1.2.0=hfd05255_1
85-
- libcblas=3.11.0=5_h2a3cdd5_mkl
86-
- libclang13=21.1.7=default_ha2db4b5_2
87-
- libcrc32c=1.1.2=h0e60522_0
77+
- libbrotlicommon=1.2.0=hc82b238_0
78+
- libbrotlidec=1.2.0=h431afc6_0
79+
- libbrotlienc=1.2.0=ha521d6b_0
80+
- libcblas=3.11.0=1_h2a3cdd5_mkl
81+
- libclang13=21.1.5=default_ha2db4b5_0
8882
- libcublas=12.9.1.4=hac47afa_1
8983
- libcudnn=9.10.2.21=hca898b4_0
9084
- libcudnn-dev=9.10.2.21=hca898b4_0
9185
- libcudss=0.7.1.4=hca898b4_0
9286
- libcufft=11.4.1.4=hac47afa_1
9387
- libcurand=10.3.10.19=hac47afa_1
94-
- libcurl=8.17.0=h43ecb02_1
88+
- libcurl=8.17.0=h43ecb02_0
9589
- libcusolver=11.7.5.82=hac47afa_2
9690
- libcusparse=12.5.10.65=hac47afa_2
9791
- libdeflate=1.25=h51727cc_0
98-
- libexpat=2.7.3=hac47afa_0
92+
- libexpat=2.7.1=hac47afa_0
9993
- libffi=3.5.2=h52bdfb6_0
10094
- libfreetype=2.14.1=h57928b3_0
10195
- libfreetype6=2.14.1=hdbac1cb_0
102-
- libgcc=15.2.0=h8ee18e1_16
103-
- libglib=2.86.3=h0c9aed9_0
104-
- libgomp=15.2.0=h8ee18e1_16
105-
- libhwloc=2.12.1=default_h4379cf1_1003
96+
- libgcc=15.2.0=h1383e82_7
97+
- libglib=2.86.1=hd9c3897_2
98+
- libgomp=15.2.0=h1383e82_7
99+
- libhwloc=2.12.1=default_h64bd3f2_1002
106100
- libhwy=1.3.0=ha71e874_1
107101
- libiconv=1.18=hc1393d2_2
108102
- libintl=0.22.5=h5728263_3
109103
- libjpeg-turbo=3.1.2=hfd05255_0
110104
- libjxl=0.11.1=hac9b6f3_5
111-
- liblapack=3.11.0=5_hf9ab0e9_mkl
105+
- liblapack=3.11.0=1_hf9ab0e9_mkl
112106
- liblzma=5.8.1=h2466b09_2
113107
- libmagma=2.9.0=hb6a17ea_3
114108
- libnvjitlink=12.9.86=hac47afa_2
115-
- libpng=1.6.53=h7351971_0
109+
- libpng=1.6.50=h7351971_1
116110
- libprotobuf=6.31.1=hdcda5b4_2
117-
- libsqlite=3.51.1=hf5d6505_0
111+
- libsqlite=3.51.0=hf5d6505_0
118112
- libssh2=1.11.1=h9aa295b_0
119113
- libtiff=4.7.1=h8f73337_1
120-
- libtorch=2.9.1=cuda128_mkl_hbf96477_300
114+
- libtorch=2.8.0=cuda128_mkl_hb35488f_302
121115
- libuv=1.51.0=hfd05255_1
122116
- libvulkan-loader=1.4.328.1=h477610d_0
123117
- libwebp-base=1.6.0=h4d5522a_0
@@ -129,60 +123,57 @@ dependencies:
129123
- libzlib=1.3.1=h2466b09_2
130124
- libzopfli=1.0.3=h0e60522_0
131125
- lifelines=0.30.0=pyhd8ed1ab_1
132-
- llvm-openmp=21.1.8=h4fa8253_0
126+
- llvm-openmp=21.1.5=h4fa8253_2
133127
- lz4-c=1.10.0=h2466b09_1
134128
- markdown=3.10=pyhcf101f3_1
135129
- markdown-it-py=4.0.0=pyhd8ed1ab_0
136130
- markupsafe=3.0.3=py311h3f79411_0
137131
- matplotlib-base=3.10.8=py311h1675fdf_0
138132
- mdurl=0.1.2=pyhd8ed1ab_1
139133
- mkl=2025.3.0=hac47afa_454
140-
- ml_dtypes=0.5.4=np2py311hf2e69b3_0
134+
- ml_dtypes=0.5.1=py311h11fd7f3_1
141135
- mpmath=1.3.0=pyhd8ed1ab_1
142136
- msgpack-python=1.1.2=py311h3fd045d_1
143137
- munkres=1.1.4=pyhd8ed1ab_1
144138
- namex=0.1.0=pyhd8ed1ab_0
145-
- narwhals=2.14.0=pyhcf101f3_0
139+
- narwhals=2.12.0=pyhcf101f3_0
146140
- nd2reader=3.3.1=pyhd8ed1ab_0
147-
- networkx=3.6.1=pyhcf101f3_0
148-
- numcodecs=0.16.5=py311h11fd7f3_0
141+
- networkx=3.5=pyhe01879c_0
142+
- numcodecs=0.16.1=py311h11fd7f3_2
149143
- numpy=2.3.5=py311h80b3fa1_0
150144
- openjpeg=2.5.4=h24db6dd_0
151145
- openssl=3.6.0=h725018a_0
152146
- optree=0.18.0=py311h3fd045d_0
153147
- packaging=25.0=pyh29332c3_1
154-
- pandas=2.3.3=py311h11fd7f3_2
155-
- pcre2=10.47=hd2b5f0e_0
156-
- pillow=12.0.0=py311h17b8079_2
148+
- pandas=2.3.3=py311h11fd7f3_1
149+
- pcre2=10.46=h3402e2f_0
150+
- pillow=12.0.0=py311hf7ee305_0
157151
- pims=0.7=pyhd8ed1ab_1
158152
- pip=25.3=pyh8b19718_0
159153
- pixman=0.46.4=h5112557_1
160154
- pthread-stubs=0.4=h0e40799_1002
161-
- pybind11=3.0.1=pyh7a1b43c_0
162-
- pybind11-abi=11=hc364b38_1
163-
- pybind11-global=3.0.1=pyh5e4992e_0
164-
- pydantic=2.12.5=pyhcf101f3_1
165-
- pydantic-core=2.41.5=py311hf51aa87_1
155+
- pybind11=2.13.6=pyhc790b64_3
156+
- pybind11-abi=4=hd8ed1ab_3
157+
- pybind11-global=2.13.6=pyh6a1d191_3
166158
- pygments=2.19.2=pyhd8ed1ab_0
167159
- pyparsing=3.2.5=pyhcf101f3_0
168-
- pyside6=6.10.1=py311hf70c7b4_0
160+
- pyside6=6.9.3=py311hf70c7b4_1
169161
- python=3.11.14=h0159041_2_cpython
170162
- python-dateutil=2.9.0.post0=pyhe01879c_2
171-
- python-tzdata=2025.3=pyhd8ed1ab_0
163+
- python-tzdata=2025.2=pyhd8ed1ab_0
172164
- python_abi=3.11=8_cp311
173-
- pytorch=2.9.1=cuda128_mkl_py311_h7c65ee9_300
165+
- pytorch=2.8.0=cuda128_mkl_py311_h889696f_302
174166
- pytz=2025.2=pyhd8ed1ab_0
175167
- pywavelets=1.9.0=py311h17033d2_2
176168
- pyyaml=6.0.3=py311h3f79411_0
177169
- qhull=2020.2=hc790b64_5
178-
- qt6-main=6.10.1=hf1bda90_2
170+
- qt6-main=6.9.3=ha0de62e_1
179171
- rav1e=0.7.1=ha073cba_3
180172
- rich=14.2.0=pyhcf101f3_0
181173
- scikit-image=0.25.2=py311h11fd7f3_2
182-
- scikit-learn=1.8.0=np2py311hd01f973_1
174+
- scikit-learn=1.7.2=py311h8a15ebc_0
183175
- scipy=1.16.3=py311hf127856_1
184176
- setuptools=80.9.0=pyhff2d567_0
185-
- shellingham=1.5.4=pyhd8ed1ab_2
186177
- six=1.17.0=pyhe01879c_1
187178
- sleef=3.9.0=h67fd636_0
188179
- slicerator=1.1.0=pyhd8ed1ab_1
@@ -191,31 +182,27 @@ dependencies:
191182
- sympy=1.14.0=pyh04b8f61_5
192183
- tbb=2022.3.0=hd094cb3_1
193184
- threadpoolctl=3.6.0=pyhecae5ae_0
194-
- tifffile=2025.12.12=pyhd8ed1ab_0
185+
- tifffile=2025.10.16=pyhd8ed1ab_0
195186
- tk=8.6.13=h2c6b04d_3
196187
- tqdm=4.67.1=pyhd8ed1ab_1
197-
- typer=0.20.0=pyhefaf540_1
198-
- typer-slim=0.20.0=pyhcf101f3_1
199-
- typer-slim-standard=0.20.0=h4daf872_1
200188
- typing-extensions=4.15.0=h396c80c_0
201-
- typing-inspection=0.4.2=pyhd8ed1ab_1
202189
- typing_extensions=4.15.0=pyhcf101f3_0
203-
- tzdata=2025c=h8577fbf_0
190+
- tzdata=2025b=h78e105d_0
204191
- ucrt=10.0.26100.0=h57928b3_0
205192
- unicodedata2=17.0.0=py311h3485c13_1
206-
- vc=14.3=h2b53caa_33
207-
- vc14_runtime=14.44.35208=h818238b_33
208-
- vcomp14=14.44.35208=h818238b_33
209-
- vs2015_runtime=14.44.35208=h38c0c73_33
193+
- vc=14.3=h2b53caa_32
194+
- vc14_runtime=14.44.35208=h818238b_32
195+
- vcomp14=14.44.35208=h818238b_32
196+
- vs2015_runtime=14.44.35208=h38c0c73_32
210197
- wheel=0.45.1=pyhd8ed1ab_1
211198
- wrapt=1.17.3=py311h3485c13_1
212199
- xmltodict=1.0.2=pyhcf101f3_0
213200
- xorg-libxau=1.0.12=hba3369d_1
214201
- xorg-libxdmcp=1.1.5=hba3369d_1
215202
- yaml=0.2.5=h6a83c73_3
216-
- zarr=3.1.5=pyhcf101f3_0
203+
- zarr=3.1.3=pyhcf101f3_0
217204
- zfp=1.0.1=h2f0f97f_3
218-
- zipp=3.23.0=pyhcf101f3_1
219-
- zlib-ng=2.3.2=h0261ad2_1
220-
- zstd=1.5.7=h534d264_6
221-
prefix: E:\Programs\miniforge3\envs\organoid_tracker
205+
- zipp=3.23.0=pyhd8ed1ab_0
206+
- zlib-ng=2.2.5=h32d8bfd_0
207+
- zstd=1.5.7=hbeecb71_2
208+
prefix: C:\Users\klumpe\AppData\Local\miniconda3\envs\organoid_tracker

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