scTEI/NAMESPACE at devel · kullrich/scTEI · GitHub

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# Generated by roxygen2: do not edit by hand

export(Ident2cellList)
export(REMatrix)
export(TEI)
export(bootTEI)
export(of2orthomap)
export(orderMetaData)
export(pMatrixTEI)
export(pStrataTEI)
export(rcpp_boottei_parallel)
export(rcpp_meanMatrix_parallel)
export(rcpp_pMatrix_parallel)
export(rcpp_pStrata_parallel)
export(rcpp_tei_parallel)
export(seurat2monocle3)
import(Matrix)
import(Rcpp)
importFrom(ComplexHeatmap,Heatmap)
importFrom(Seurat,DefaultAssay)
importFrom(Seurat,GetAssayData)
importFrom(Seurat,Idents)
importFrom(Seurat,Loadings)
importFrom(Seurat,Stdev)
importFrom(Seurat,as.SingleCellExperiment)
importFrom(SingleCellExperiment,reducedDimNames)
importFrom(SummarizedExperiment,rowData)
importFrom(methods,"slot<-")
importFrom(methods,as)
importFrom(methods,is)
importFrom(methods,slot)
importFrom(monocle3,estimate_size_factors)
importFrom(myTAI,is.ExpressionSet)
importFrom(readr,read_tsv)
importFrom(stats,setNames)
importFrom(stringr,str_split_fixed)
importFrom(taxizedb,classification)
importFrom(taxizedb,taxid2name)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(viridis,viridis)
useDynLib(scTEI, .registration = TRUE)