Simple canary job on GH actions (#360)

Job runs equibind on GH actions every 10 minutes.

Author: Humberto Evans

.github/workflows/canary.yml

@@ -0,0 +1,53 @@
+name: Canary Run Equibind Tool
+
+on:
+  workflow_dispatch:
+  schedule:
+    - cron: '*/10 * * * *'
+
+jobs:
+  canary:
+    runs-on: ubuntu-20.04
+    environment: ci
+    env:
+      GH_TOKEN: ${{ github.token }}
+    steps:
+      # Checkout the repository. Note we do not use anything other than the test data and tools directory
+      - name: Checkout
+        uses: actions/checkout@v3
+
+      - name: Download the latest release
+        run: |
+          # use the GitHub CLI to download the latest release
+          gh release download --repo labdao/plex --pattern "*linux_amd64.tar.gz"
+          # extract the package
+          tar -xf *.tar.gz
+
+      - name: Run Equibind
+        run: |
+          # use tee so we can see stdout in github, and parse it later
+          ./plex -tool equibind -input-dir testdata/binding/abl 2>&1 | tee plex_out.log
+          # capture the exit status of the plex call
+          plex_result_code=${PIPESTATUS[0]}
+          # exit immediately if plex exited with an error
+          if [ $plex_result_code -gt 0 ]; then
+            exit $plex_result_code
+          fi
+          # parse the output directory from the plex stdout
+          result_dir=$(cat plex_out.log | grep 'Finished processing, results written to' | sed -n 's/^.*Finished processing, results written to //p' | sed 's/\/io.json//')
+          # exit if no docked files are found
+          cd "$result_dir/entry-0/outputs"
+          if [ "$(find . -name '*docked.sdf' | grep 'docked.sdf')" == "" ]; then
+            echo "No docked files found"
+            exit 1
+          else
+            echo "Docked files found"
+          fi
+        env:
+          PLEX_ACCESS_TOKEN: ${{ secrets.PLEX_ACCESS_TOKEN }}
+
+      - name: Check in with Heii On-Call
+        run: |
+          curl -X POST -H 'Authorization: Bearer ${{ secrets.HEII_ON_CALL_API_KEY }}' https://api.heiioncall.com./triggers/${HEII_ON_CALL_INBOUND_TRIGGER_ID}/checkin
+        env:
+          HEII_ON_CALL_INBOUND_TRIGGER_ID: e720588c-35cd-4392-9d02-bec350aa34e9