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docs/scran__markers_8hpp.html

@@ -107,6 +107,7 @@
 <a href="#details">More...</a></p>
 <div class="textblock"><code>#include &quot;<a class="el" href="score__markers__pairwise_8hpp_source.html">score_markers_pairwise.hpp</a>&quot;</code><br />
 <code>#include &quot;<a class="el" href="score__markers__summary_8hpp_source.html">score_markers_summary.hpp</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="score__markers__best_8hpp_source.html">score_markers_best.hpp</a>&quot;</code><br />
 <code>#include &quot;<a class="el" href="summarize__effects_8hpp_source.html">summarize_effects.hpp</a>&quot;</code><br />
 </div>
 <p><a href="scran__markers_8hpp_source.html">Go to the source code of this file.</a></p>

docs/scran__markers_8hpp_source.html

@@ -105,12 +105,14 @@
 <div class="line"><a id="l00003" name="l00003"></a><span class="lineno">    3</span> </div>
 <div class="line"><a id="l00004" name="l00004"></a><span class="lineno">    4</span><span class="preprocessor">#include &quot;<a class="code" href="score__markers__pairwise_8hpp.html">score_markers_pairwise.hpp</a>&quot;</span></div>
 <div class="line"><a id="l00005" name="l00005"></a><span class="lineno">    5</span><span class="preprocessor">#include &quot;<a class="code" href="score__markers__summary_8hpp.html">score_markers_summary.hpp</a>&quot;</span></div>
-<div class="line"><a id="l00006" name="l00006"></a><span class="lineno">    6</span><span class="preprocessor">#include &quot;<a class="code" href="summarize__effects_8hpp.html">summarize_effects.hpp</a>&quot;</span></div>
-<div class="line"><a id="l00007" name="l00007"></a><span class="lineno">    7</span> </div>
-<div class="line"><a id="l00017" name="l00017"></a><span class="lineno">   17</span><span class="keyword">namespace </span><a class="code hl_namespace" href="namespacescran__markers.html">scran_markers</a> {} </div>
-<div class="line"><a id="l00018" name="l00018"></a><span class="lineno">   18</span> </div>
-<div class="line"><a id="l00019" name="l00019"></a><span class="lineno">   19</span><span class="preprocessor">#endif</span></div>
+<div class="line"><a id="l00006" name="l00006"></a><span class="lineno">    6</span><span class="preprocessor">#include &quot;<a class="code" href="score__markers__best_8hpp.html">score_markers_best.hpp</a>&quot;</span></div>
+<div class="line"><a id="l00007" name="l00007"></a><span class="lineno">    7</span><span class="preprocessor">#include &quot;<a class="code" href="summarize__effects_8hpp.html">summarize_effects.hpp</a>&quot;</span></div>
+<div class="line"><a id="l00008" name="l00008"></a><span class="lineno">    8</span> </div>
+<div class="line"><a id="l00018" name="l00018"></a><span class="lineno">   18</span><span class="keyword">namespace </span><a class="code hl_namespace" href="namespacescran__markers.html">scran_markers</a> {} </div>
+<div class="line"><a id="l00019" name="l00019"></a><span class="lineno">   19</span> </div>
+<div class="line"><a id="l00020" name="l00020"></a><span class="lineno">   20</span><span class="preprocessor">#endif</span></div>
 <div class="ttc" id="anamespacescran__markers_html"><div class="ttname"><a href="namespacescran__markers.html">scran_markers</a></div><div class="ttdoc">Marker detection for single-cell data.</div><div class="ttdef"><b>Definition</b> score_markers_pairwise.hpp:25</div></div>
+<div class="ttc" id="ascore__markers__best_8hpp_html"><div class="ttname"><a href="score__markers__best_8hpp.html">score_markers_best.hpp</a></div><div class="ttdoc">Find the best markers in each pairwise comparison between groups of cells.</div></div>
 <div class="ttc" id="ascore__markers__pairwise_8hpp_html"><div class="ttname"><a href="score__markers__pairwise_8hpp.html">score_markers_pairwise.hpp</a></div><div class="ttdoc">Score potential markers by pairwise effect sizes between groups of cells.</div></div>
 <div class="ttc" id="ascore__markers__summary_8hpp_html"><div class="ttname"><a href="score__markers__summary_8hpp.html">score_markers_summary.hpp</a></div><div class="ttdoc">Score potential markers by summaries of effect sizes between pairs of groups of cells.</div></div>
 <div class="ttc" id="asummarize__effects_8hpp_html"><div class="ttname"><a href="summarize__effects_8hpp.html">summarize_effects.hpp</a></div><div class="ttdoc">Summarize the effect sizes from pairwise comparisons.</div></div>

docs/scran_markers.tag

@@ -33,6 +33,7 @@
     <filename>scran__markers_8hpp.html</filename>
     <includes id="score__markers__pairwise_8hpp" name="score_markers_pairwise.hpp" local="yes" import="no" module="no" objc="no">score_markers_pairwise.hpp</includes>
     <includes id="score__markers__summary_8hpp" name="score_markers_summary.hpp" local="yes" import="no" module="no" objc="no">score_markers_summary.hpp</includes>
+    <includes id="score__markers__best_8hpp" name="score_markers_best.hpp" local="yes" import="no" module="no" objc="no">score_markers_best.hpp</includes>
     <includes id="summarize__effects_8hpp" name="summarize_effects.hpp" local="yes" import="no" module="no" objc="no">summarize_effects.hpp</includes>
     <namespace>scran_markers</namespace>
   </compound>