[pre-commit.ci] pre-commit autoupdate (#213)

* [pre-commit.ci] pre-commit autoupdate

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.12.4 → v0.13.2](astral-sh/ruff-pre-commit@v0.12.4...v0.13.2)
- [github.com/pre-commit/mirrors-mypy: v1.17.0 → v1.18.2](pre-commit/mirrors-mypy@v1.17.0...v1.18.2)

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

Author: pre-commit-ci[bot]

.pre-commit-config.yaml

@@ -1,15 +1,15 @@
 repos:
 - repo: https://github.com/astral-sh/ruff-pre-commit
   # Ruff version.
-  rev: v0.12.4
+  rev: v0.13.2
   hooks:
     # Run the linter.
     - id: ruff
       args: [ --fix, --unsafe-fixes]
     # Run the formatter.
     - id: ruff-format
 - repo: https://github.com/pre-commit/mirrors-mypy
-  rev: v1.17.0
+  rev: v1.18.2
   hooks:
   - id: mypy
     files: ^pymatgen/

docs/source/content/freysoldt-correction.ipynb

@@ -136,7 +136,7 @@
     "\n",
     "def comparison_plots(q):\n",
     "    \"\"\"\"\"\"\n",
-    "    fig, axs = plt.subplots(3, 2, figsize=(15, 15), sharey=True)\n",
+    "    _fig, axs = plt.subplots(3, 2, figsize=(15, 15), sharey=True)\n",
     "    for direction in range(3):\n",
     "        plot_sxd_output(\n",
     "            q,\n",

docs/source/content/photo-conduct.ipynb

@@ -122,7 +122,7 @@
     "        spin_idx = _get_spin_idx(k)\n",
     "        for kpt in range(spin_eigs.shape[0]):\n",
     "            for ib in range(fermi_idx - bwind, fermi_idx + bwind):\n",
-    "                e, o = spin_eigs[kpt, ib, :]\n",
+    "                e, _o = spin_eigs[kpt, ib, :]\n",
     "                idx = (ib, kpt, spin_idx)\n",
     "                e_out = f\"{e:7.4f}*\" if idx in defect_bands else f\"{e:8.5f}\"\n",
     "                output[(ib)].append(e_out)\n",

pymatgen/analysis/defects/ccd.py

@@ -692,7 +692,7 @@ def plot_pes(
     if ax is None:
         from matplotlib import pyplot as plt
 
-        fig, ax = plt.subplots()
+        _fig, ax = plt.subplots()
     ax.plot(
         np.array(hd.distortions) + x_shift,
         (np.array(hd.energies) - hd.energies[hd.relaxed_index]) + y_shift,

pymatgen/analysis/defects/supercells.py

@@ -84,7 +84,7 @@ def get_matched_structure_mapping_old(
     s1, s2 = sm._process_species([uc_struct, sc_struct])
     fu, _ = sm._get_supercell_size(s1, s2)
     try:
-        val, dist, sc_m, total_t, mapping = sm._strict_match(
+        _val, _dist, sc_m, total_t, _mapping = sm._strict_match(
             s1,
             s2,
             fu=fu,

pymatgen/analysis/defects/utils.py

@@ -383,7 +383,7 @@ def cluster_nodes(
             else:
                 fcoord = fcoords[j]
                 # We need the image to combine the frac_coords properly.
-                d, image = lattice.get_distance_and_image(frac_coords[0], fcoord)
+                _d, image = lattice.get_distance_and_image(frac_coords[0], fcoord)
                 frac_coords.append(fcoord + image)
         merged_fcoords.append(np.average(frac_coords, axis=0))