Compute C-order memmap, projections, and correlation image in parallel, efficiently, avoiding OOM #319
Workflow file for this run
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| name: Windows Conda | |
| on: | |
| pull_request: | |
| branches: | |
| - master | |
| - dev | |
| push: | |
| branches: [ master ] | |
| jobs: | |
| build-windows: | |
| name: windows conda | |
| runs-on: "windows-latest" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: '3.10' | |
| mamba-version: "*" | |
| channels: conda-forge,defaults | |
| channel-priority: true | |
| activate-environment: mescore | |
| environment-file: environment.yml | |
| - shell: bash -l {0} | |
| run: | | |
| conda info | |
| conda list | |
| conda config --show-sources | |
| conda config --show | |
| printenv | sort | |
| - shell: bash -l {0} | |
| run: | | |
| # make a drive letter alias so we can test canonical path resolution | |
| subst Z: . | |
| cd /z | |
| conda activate mescore | |
| mamba install pytest | |
| caimanmanager install | |
| pip install . | |
| DOWNLOAD_GROUND_TRUTHS=1 pytest -s . |