diff --git a/CHANGELOG.md b/CHANGELOG.md
index eb97b74..840675b 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,8 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## v2.1.0dev - [date]
+
 ## [v2.0.1](https://github.com/nf-core/metaboigniter/releases/tag/2.0.1) - 2024-04-12
 
 - Problems with missing output data after peak picking have been resolved
diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml
index 55f9ea7..cdcc045 100644
--- a/assets/multiqc_config.yml
+++ b/assets/multiqc_config.yml
@@ -1,7 +1,7 @@
 report_comment: >
-  This report has been generated by the <a href="https://github.com/nf-core/metaboigniter/releases/tag/2.0.1" target="_blank">nf-core/metaboigniter</a>
+  This report has been generated by the <a href="https://github.com/nf-core/metaboigniter/tree/dev" target="_blank">nf-core/metaboigniter</a>
   analysis pipeline. For information about how to interpret these results, please see the
-  <a href="https://nf-co.re/metaboigniter/2.0.1/docs/output" target="_blank">documentation</a>.
+  <a href="https://nf-co.re/metaboigniter/dev/docs/output" target="_blank">documentation</a>.
 report_section_order:
   "nf-core-metaboigniter-methods-description":
     order: -1000
diff --git a/nextflow.config b/nextflow.config
index d79daf6..2641e19 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -463,7 +463,7 @@ manifest {
     description     = """Pre-processing of mass spectrometry-based metabolomics data"""
     mainScript      = 'main.nf'
     nextflowVersion = '!>=23.04.0'
-    version         = '2.0.1'
+    version         = '2.1.0dev'
     doi             = ''
 }