snaps for all regarding tests

tlebchan · tlebchan · commit 4372914d6978 · 2026-03-14T20:24:17.000+04:00
diff --git a/tests/default.nf.test.snap b/tests/default.nf.test.snap
@@ -116,6 +116,10 @@
                     "python": "3.12.12",
                     "scanpy": "1.11.5"
                 },
+                "SCANPY_CELLCYCLE": {
+                    "python": "3.13.11",
+                    "scanpy": "1.11.5"
+                },
                 "SCANPY_COMBAT": {
                     "numpy": "2.3.5",
                     "pandas": "2.3.3",
@@ -279,10 +283,10 @@
                 "multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"
             ]
         ],
+        "timestamp": "2026-03-13T21:22:47.601973",
         "meta": {
-            "nf-test": "0.9.2",
+            "nf-test": "0.9.4",
             "nextflow": "25.10.2"
-        },
-        "timestamp": "2026-02-15T21:11:08.979254408"
+        }
     }
 }
diff --git a/tests/main_pipeline_build.nf.test.snap b/tests/main_pipeline_build.nf.test.snap
@@ -121,6 +121,10 @@
                     "python": "3.12.12",
                     "scanpy": "1.11.5"
                 },
+                "SCANPY_CELLCYCLE": {
+                    "python": "3.13.11",
+                    "scanpy": "1.11.5"
+                },
                 "SCANPY_COMBAT": {
                     "numpy": "2.3.5",
                     "pandas": "2.3.3",
@@ -293,10 +297,10 @@
                 "multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"
             ]
         ],
+        "timestamp": "2026-03-14T19:09:42.838981",
         "meta": {
-            "nf-test": "0.9.2",
+            "nf-test": "0.9.4",
             "nextflow": "25.10.2"
-        },
-        "timestamp": "2026-02-15T21:26:36.309062323"
+        }
     }
 }
diff --git a/tests/main_pipeline_extend.nf.test.snap b/tests/main_pipeline_extend.nf.test.snap
@@ -112,6 +112,10 @@
                     "python": "3.13.3",
                     "scanpy": "1.11.2"
                 },
+                "SCANPY_CELLCYCLE": {
+                    "python": "3.13.11",
+                    "scanpy": "1.11.5"
+                },
                 "SCANPY_FILTER": {
                     "python": "3.13.11",
                     "scanpy": "1.11.5"
@@ -209,10 +213,10 @@
                 "multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"
             ]
         ],
+        "timestamp": "2026-03-14T19:21:25.557709",
         "meta": {
-            "nf-test": "0.9.2",
+            "nf-test": "0.9.4",
             "nextflow": "25.10.2"
-        },
-        "timestamp": "2026-02-15T21:10:29.965230208"
+        }
     }
 }
diff --git a/tests/main_pipeline_qc.nf.test.snap b/tests/main_pipeline_qc.nf.test.snap
@@ -1,7 +1,7 @@
 {
     "Should process data from scratch": {
         "content": [
-            57,
+            60,
             {
                 "ADATA_READRDS": {
                     "anndata": "0.11.1",
@@ -91,6 +91,10 @@
                     "python": "3.13.3",
                     "scanpy": "1.11.2"
                 },
+                "SCANPY_CELLCYCLE": {
+                    "python": "3.13.11",
+                    "scanpy": "1.11.5"
+                },
                 "SCANPY_FILTER": {
                     "python": "3.13.11",
                     "scanpy": "1.11.5"
@@ -174,10 +178,10 @@
                 "multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"
             ]
         ],
+        "timestamp": "2026-03-14T19:44:58.451928",
         "meta": {
-            "nf-test": "0.9.2",
+            "nf-test": "0.9.4",
             "nextflow": "25.10.2"
-        },
-        "timestamp": "2026-02-15T21:07:51.970060112"
+        }
     }
 }
diff --git a/tests/main_pipeline_reference_mapping.nf.test.snap b/tests/main_pipeline_reference_mapping.nf.test.snap
@@ -108,6 +108,10 @@
                     "python": "3.13.3",
                     "scanpy": "1.11.2"
                 },
+                "SCANPY_CELLCYCLE": {
+                    "python": "3.13.11",
+                    "scanpy": "1.11.5"
+                },
                 "SCANPY_FILTER": {
                     "python": "3.13.11",
                     "scanpy": "1.11.5"
@@ -209,10 +213,10 @@
                 "multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"
             ]
         ],
+        "timestamp": "2026-03-14T14:53:34.369624",
         "meta": {
-            "nf-test": "0.9.2",
+            "nf-test": "0.9.4",
             "nextflow": "25.10.2"
-        },
-        "timestamp": "2026-02-15T21:08:43.765855438"
+        }
     }
 }
diff --git a/tests/main_pipeline_sub.nf.test.snap b/tests/main_pipeline_sub.nf.test.snap
@@ -587,10 +587,10 @@
                 "multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"
             ]
         ],
+        "timestamp": "2026-03-14T20:17:44.297436",
         "meta": {
-            "nf-test": "0.9.2",
+            "nf-test": "0.9.4",
             "nextflow": "25.10.2"
-        },
-        "timestamp": "2026-01-25T17:57:35.291114377"
+        }
     }
 }

Original file line number	Diff line number	Diff line change
`@@ -587,10 +587,10 @@`
`587`	`587`	`"multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"`
`588`	`588`	`]`
`589`	`589`	`],`
	`590`	`+ "timestamp": "2026-03-14T20:17:44.297436",`
`590`	`591`	`"meta": {`
`591`		`- "nf-test": "0.9.2",`
	`592`	`+ "nf-test": "0.9.4",`
`592`	`593`	`"nextflow": "25.10.2"`
`593`		`- },`
`594`		`- "timestamp": "2026-01-25T17:57:35.291114377"`
	`594`	`+ }`
`595`	`595`	`}`
`596`	`596`	`}`