increase bras chunk to 1000

ghar1821 · ghar1821 · commit a0740ccc0bfe · 2025-10-13T23:46:54.000+11:00
diff --git a/src/metrics/bras/script.py b/src/metrics/bras/script.py
@@ -57,6 +57,7 @@
     labels=ct_labels_s1,
     batch=batch_labels_s1,
     metric="euclidean",
+    chunk_size=1000,
 )
 
 batch_labels_s2 = integrated_s2.obs["batch"].values

Original file line number	Diff line number	Diff line change
`@@ -57,6 +57,7 @@`
`57`	`57`	`labels=ct_labels_s1,`
`58`	`58`	`batch=batch_labels_s1,`
`59`	`59`	`metric="euclidean",`
	`60`	`+ chunk_size=1000,`
`60`	`61`	`)`
`61`	`62`
`62`	`63`	`batch_labels_s2 = integrated_s2.obs["batch"].values`