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    221 repositories

    • ooicgsn-datasets

      Public
      Repository for "Curated" Datasets derived from OOI CGSN data
      Jupyter Notebook
      •0•0•0•0•Updated Aug 27, 2026Aug 27, 2026

    • ifcbdb

      Public
      IFCB dashboard
      Python
      •
      MIT License
      •13•14•73•15•Updated Aug 27, 2026Aug 27, 2026

    • ooicgsn-data-tools

      Public
      OOI-CGSN tools for data analysis
      Jupyter Notebook
      •10•2•0•1•Updated Aug 27, 2026Aug 27, 2026

    • ros-triton-classifier

      Public
      Python
      •1•0•5•7•Updated Aug 27, 2026Aug 27, 2026

    • amplify-prefect

      Public
      Prefect server for orchestrating AMPLIfy workflows
      amplify-whoi
      amplify-whoi
      Python
      •0•0•0•5•Updated Aug 27, 2026Aug 27, 2026

    • ifcb-sync

      Public
      AWS-based data pipeline to share IFCB data from multiple end users to a single IFCB dashboard
      Shell
      •
      MIT License
      •0•1•0•0•Updated Aug 26, 2026Aug 26, 2026

    • whoi-hab-hub-frontend

      Public
      Frontend React web application for the HABHub project
      JavaScript
      •
      MIT License
      •0•0•0•2•Updated Aug 26, 2026Aug 26, 2026

    • whoi-hab-hub

      Public
      Harmful Algal Bloom data API and map project
      Python
      •
      GNU General Public License v3.0
      •1•9•4•9•Updated Aug 26, 2026Aug 26, 2026

    • nes-lter-ims-utils

      Public
      Tools for working with data in the NES-LTER information system
      Python
      •
      MIT License
      •0•3•0•1•Updated Aug 25, 2026Aug 25, 2026

    • ooicgsn-asset-management

      Public
      Asset Management
      Jupyter Notebook
      •44•1•0•4•Updated Aug 25, 2026Aug 25, 2026

    • ifcb-flow-metric

      Public
      An unsupervised classification model for IFCB data detecting anomalous distributions of ROI positions
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • ifcb-inference

      Public
      ONNX-based inference for plankton classification on IFCB data
      amplify-whoi
      amplify-whoi
      Python
      •
      MIT License
      •0•0•1•0•Updated Aug 25, 2026Aug 25, 2026

    • improv

      Public
      a shared data platform for scientific imaging instruments. It provides a single place to store, organize, and query images and their associated scientific produ…
      amplify-whoi
      amplify-whoi
      Python
      •0•0•1•0•Updated Aug 24, 2026Aug 24, 2026

    • nes-lter-sharp-underway-processing

      Public
      Converts the raw underway instrument logs from an R/V Hugh R. Sharp cruise into the published 1-minute CSV product.
      R
      •
      MIT License
      •0•0•0•0•Updated Aug 21, 2026Aug 21, 2026

    • ifcb-focus

      Public
      Python
      •0•0•0•2•Updated Aug 20, 2026Aug 20, 2026

    • nes-lter-nutrient-mvco

      Public
      NES-LTER dissolved nutrient data from the Martha's Vineyard Coastal Observatory site prepared for EDI
      nes-lter-edi-packages
      nes-lter-edi-packages
      MIT License
      •2•1•7•0•Updated Aug 20, 2026Aug 20, 2026

    • image-classifier-dojo

      Public
      Great for training computer vision classifier models!
      Python
      •
      MIT License
      •0•0•9•0•Updated Aug 20, 2026Aug 20, 2026

    • ISIIS-analysis

      Public
      Stingray-ISIIS image analysis, metadata, and ocean data analysis (NES-LTER and OTZ)
      MATLAB
      •0•2•0•0•Updated Aug 18, 2026Aug 18, 2026

    • obs-roundabout

      Public
      OBS Roundabout Asset Tracking system
      Python
      •
      Other
      •4•0•0•0•Updated Aug 18, 2026Aug 18, 2026

    • ifcb-features

      Public
      Python implementation of IFCB segmentation and feature extraction code
      Python
      •
      MIT License
      •3•10•0•1•Updated Aug 14, 2026Aug 14, 2026

    • ifcbkit

      Public
      A Python library for accessing IFCB (Imaging FlowCytobot) raw data, images, and products.
      Python
      •
      MIT License
      •0•0•1•1•Updated Aug 14, 2026Aug 14, 2026

    • alvin-observer-ui-client

      Public
      React frontend client for Alvin observer camera controls
      JavaScript
      •1•2•8•9•Updated Aug 14, 2026Aug 14, 2026

    • sati

      Public
      Scale-Aware Training and InferenceLarge-image multi-scale object-detection training and inference
      Python
      •0•0•0•0•Updated Aug 13, 2026Aug 13, 2026

    • seatrac-api

      Public
      Lua
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 12, 2026Aug 12, 2026

    • stingray-frame-viewer

      Public
      Web service that serves individual frames of Stingray (towed shadowgraph imager) videos to browsers.
      Python
      •0•0•0•0•Updated Aug 7, 2026Aug 7, 2026

    • biocomp

      Public
      Bioinformatics protocols for MCG members
      bioinformaticsmicrobiology
      bioinformaticsmicrobiology
      R
      •
      MIT License
      •0•0•0•0•Updated Aug 7, 2026Aug 7, 2026

    • argodb-docker-local

      Public
      Dockerized local dev environment to test Argo DB with BGS data processing app
      MIT License
      •0•1•0•0•Updated Aug 7, 2026Aug 7, 2026

    • amplify-db-utils

      Public
      Columnar database abstraction layer for AMPLIfy media (e.g., image) workflows.
      Python
      •0•0•0•0•Updated Aug 6, 2026Aug 6, 2026

    • ndsf-sealog-client

      Public
      NDSF edition of the Sealog event logging web client
      JavaScript
      •
      MIT License
      •1•4•9•2•Updated Aug 5, 2026Aug 5, 2026

    • ndsf-sealog-server

      Public
      NDSF edition of the Sealog event logging server
      JavaScript
      •
      MIT License
      •0•1•7•2•Updated Aug 5, 2026Aug 5, 2026
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