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docs: update dev site for d8714f5f903a3ed0d8ec613f1bc51499bb077174
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Lines changed: 61 additions & 249 deletions

‎dev/_modules/pgmpy/models/LinearGaussianBayesianNetwork.html‎

Lines changed: 28 additions & 121 deletions
Original file line numberDiff line numberDiff line change
@@ -962,107 +962,12 @@ <h1>Source code for pgmpy.models.LinearGaussianBayesianNetwork</h1><div class="h
962962
<span class="sd"> &gt;&gt;&gt; pred = model.predict(df_missing)</span>
963963
<span class="sd"> &gt;&gt;&gt; list(pred.columns)</span>
964964
<span class="sd"> ['x3']</span>
965-
<span class="sd"> &gt;&gt;&gt; print(pred.values)</span>
966-
<span class="sd"> [[ 8.01138228]</span>
967-
<span class="sd"> [13.61181367]</span>
968-
<span class="sd"> [ 8.70432782]</span>
969-
<span class="sd"> [ 3.71719153]</span>
970-
<span class="sd"> [ 8.1509597 ]</span>
971-
<span class="sd"> [ 6.24976516]</span>
972-
<span class="sd"> [12.2121776 ]</span>
973-
<span class="sd"> [ 6.01448446]</span>
974-
<span class="sd"> [ 5.49139518]</span>
975-
<span class="sd"> [ 9.23748708]</span>
976-
<span class="sd"> [17.92545478]</span>
977-
<span class="sd"> [ 3.24653756]</span>
978-
<span class="sd"> [ 8.78452503]</span>
979-
<span class="sd"> [10.3678509 ]</span>
980-
<span class="sd"> [ 5.33405765]</span>
981-
<span class="sd"> [ 9.09319649]</span>
982-
<span class="sd"> [10.66717573]</span>
983-
<span class="sd"> [10.9290793 ]</span>
984-
<span class="sd"> [ 6.48827753]</span>
985-
<span class="sd"> [12.7339279 ]</span>
986-
<span class="sd"> [ 0.79803275]</span>
987-
<span class="sd"> [ 9.69425692]</span>
988-
<span class="sd"> [ 5.27994359]</span>
989-
<span class="sd"> [ 8.80268511]</span>
990-
<span class="sd"> [ 4.31081468]</span>
991-
<span class="sd"> [10.76081874]</span>
992-
<span class="sd"> [10.05810137]</span>
993-
<span class="sd"> [ 5.93859429]</span>
994-
<span class="sd"> [ 4.10420816]</span>
995-
<span class="sd"> [ 7.74976272]</span>
996-
<span class="sd"> [11.67397411]</span>
997-
<span class="sd"> [ 9.63141961]</span>
998-
<span class="sd"> [ 1.72775337]</span>
999-
<span class="sd"> [ 2.2725024 ]</span>
1000-
<span class="sd"> [ 8.44578257]</span>
1001-
<span class="sd"> [ 7.602702 ]</span>
1002-
<span class="sd"> [10.53853647]</span>
1003-
<span class="sd"> [11.31860773]</span>
1004-
<span class="sd"> [ 8.00975022]</span>
1005-
<span class="sd"> [ 9.22702521]</span>
1006-
<span class="sd"> [ 3.64868722]</span>
1007-
<span class="sd"> [13.67114269]</span>
1008-
<span class="sd"> [15.01854326]</span>
1009-
<span class="sd"> [ 6.37691191]</span>
1010-
<span class="sd"> [13.14971548]</span>
1011-
<span class="sd"> [ 2.75588544]</span>
1012-
<span class="sd"> [16.93490848]</span>
1013-
<span class="sd"> [ 2.97009486]</span>
1014-
<span class="sd"> [ 5.64759205]</span>
1015-
<span class="sd"> [ 7.74788815]</span>
1016-
<span class="sd"> [ 9.86681496]</span>
1017-
<span class="sd"> [ 3.40585598]</span>
1018-
<span class="sd"> [ 9.89093876]</span>
1019-
<span class="sd"> [ 4.08221225]</span>
1020-
<span class="sd"> [15.617452 ]</span>
1021-
<span class="sd"> [ 4.14029637]</span>
1022-
<span class="sd"> [ 8.59698685]</span>
1023-
<span class="sd"> [11.89439088]</span>
1024-
<span class="sd"> [ 0.44433568]</span>
1025-
<span class="sd"> [ 8.42879464]</span>
1026-
<span class="sd"> [14.45268215]</span>
1027-
<span class="sd"> [10.62681186]</span>
1028-
<span class="sd"> [10.76349781]</span>
1029-
<span class="sd"> [16.0269725 ]</span>
1030-
<span class="sd"> [ 8.83836337]</span>
1031-
<span class="sd"> [ 5.30435055]</span>
1032-
<span class="sd"> [ 7.63843465]</span>
1033-
<span class="sd"> [13.18359343]</span>
1034-
<span class="sd"> [ 0.92282836]</span>
1035-
<span class="sd"> [ 3.35438779]</span>
1036-
<span class="sd"> [11.61943098]</span>
1037-
<span class="sd"> [ 4.52648267]</span>
1038-
<span class="sd"> [11.18074558]</span>
1039-
<span class="sd"> [ 4.86137485]</span>
1040-
<span class="sd"> [ 8.49295864]</span>
1041-
<span class="sd"> [ 7.07209154]</span>
1042-
<span class="sd"> [ 6.85461911]</span>
1043-
<span class="sd"> [ 3.96748462]</span>
1044-
<span class="sd"> [ 8.3311032 ]</span>
1045-
<span class="sd"> [ 8.04499479]</span>
1046-
<span class="sd"> [ 7.27919516]</span>
1047-
<span class="sd"> [ 4.77660469]</span>
1048-
<span class="sd"> [-0.33549712]</span>
1049-
<span class="sd"> [ 2.65815359]</span>
1050-
<span class="sd"> [15.58173105]</span>
1051-
<span class="sd"> [12.24334129]</span>
1052-
<span class="sd"> [ 7.60858529]</span>
1053-
<span class="sd"> [ 8.0673818 ]</span>
1054-
<span class="sd"> [10.30962944]</span>
1055-
<span class="sd"> [ 9.73931168]</span>
1056-
<span class="sd"> [ 5.46107107]</span>
1057-
<span class="sd"> [16.95243925]</span>
1058-
<span class="sd"> [ 2.80408287]</span>
1059-
<span class="sd"> [12.23910532]</span>
1060-
<span class="sd"> [14.03289339]</span>
1061-
<span class="sd"> [ 6.26117488]</span>
1062-
<span class="sd"> [ 7.37468791]</span>
1063-
<span class="sd"> [13.3850798 ]</span>
1064-
<span class="sd"> [ 6.83845881]</span>
1065-
<span class="sd"> [ 5.59547155]]</span>
965+
<span class="sd"> &gt;&gt;&gt; print(pred.values[:5])</span>
966+
<span class="sd"> [[11.44002506]</span>
967+
<span class="sd"> [13.55810512]</span>
968+
<span class="sd"> [ 9.17133321]</span>
969+
<span class="sd"> [ 6.65304283]</span>
970+
<span class="sd"> [ 4.12695995]]</span>
1066971
<span class="sd"> """</span>
1067972

1068973
<span class="k">def</span><span class="w"> </span><span class="fm">__init__</span><span class="p">(</span>
@@ -1577,10 +1482,10 @@ <h1>Source code for pgmpy.models.LinearGaussianBayesianNetwork</h1><div class="h
15771482
<span class="sd"> Simple forward sampling</span>
15781483

15791484
<span class="sd"> &gt;&gt;&gt; model.simulate(n_samples=3, seed=42) # doctest: +NORMALIZE_WHITESPACE</span>
1580-
<span class="sd"> x1 x2 x3</span>
1581-
<span class="sd"> 0 -3.307168 -4.270673 9.688070</span>
1582-
<span class="sd"> 1 -7.195367 -9.833986 9.493212</span>
1583-
<span class="sd"> 2 -0.324284 -4.959026 8.758940</span>
1485+
<span class="sd"> x1 x2 x3</span>
1486+
<span class="sd"> 0 2.218868 -8.050502 14.301856</span>
1487+
<span class="sd"> 1 4.762259 -10.423011 10.516473</span>
1488+
<span class="sd"> 2 1.511362 -5.509290 9.458886</span>
15841489

15851490
<span class="sd"> Sampling with intervention (do)</span>
15861491

@@ -1593,10 +1498,10 @@ <h1>Source code for pgmpy.models.LinearGaussianBayesianNetwork</h1><div class="h
15931498
<span class="sd"> Sampling with evidence</span>
15941499

15951500
<span class="sd"> &gt;&gt;&gt; model.simulate(n_samples=3, seed=42, evidence={"x1": 2.0}) # doctest: +NORMALIZE_WHITESPACE</span>
1596-
<span class="sd"> x1 x2 x3</span>
1597-
<span class="sd"> 0 2.0 -6.753790 8.242987</span>
1598-
<span class="sd"> 1 2.0 -5.284287 12.763190</span>
1599-
<span class="sd"> 2 2.0 1.133549 -3.023892</span>
1501+
<span class="sd"> x1 x2 x3</span>
1502+
<span class="sd"> 0 2.0 -2.781132 3.661179</span>
1503+
<span class="sd"> 1 2.0 -0.998195 7.819889</span>
1504+
<span class="sd"> 2 2.0 -11.804141 11.897602</span>
16001505

16011506
<span class="sd"> Sampling with both intervention and evidence</span>
16021507

@@ -1699,7 +1604,7 @@ <h1>Source code for pgmpy.models.LinearGaussianBayesianNetwork</h1><div class="h
16991604
<span class="c1"># Step 4: Sample according to evidence</span>
17001605
<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">evidence</span><span class="p">)</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
17011606
<span class="n">df</span> <span class="o">=</span> <span class="n">pd</span><span class="o">.</span><span class="n">DataFrame</span><span class="p">(</span>
1702-
<span class="n">rng</span><span class="o">.</span><span class="n">multivariate_normal</span><span class="p">(</span><span class="n">mean</span><span class="o">=</span><span class="n">mean</span><span class="p">,</span> <span class="n">cov</span><span class="o">=</span><span class="n">cov</span><span class="p">,</span> <span class="n">size</span><span class="o">=</span><span class="n">n_samples</span><span class="p">),</span>
1607+
<span class="n">rng</span><span class="o">.</span><span class="n">multivariate_normal</span><span class="p">(</span><span class="n">mean</span><span class="o">=</span><span class="n">mean</span><span class="p">,</span> <span class="n">cov</span><span class="o">=</span><span class="n">cov</span><span class="p">,</span> <span class="n">size</span><span class="o">=</span><span class="n">n_samples</span><span class="p">,</span> <span class="n">method</span><span class="o">=</span><span class="s2">"cholesky"</span><span class="p">),</span>
17031608
<span class="n">columns</span><span class="o">=</span><span class="n">variables</span><span class="p">,</span>
17041609
<span class="p">)</span>
17051610

@@ -1712,7 +1617,9 @@ <h1>Source code for pgmpy.models.LinearGaussianBayesianNetwork</h1><div class="h
17121617
<span class="n">mean_cond</span> <span class="o">=</span> <span class="n">mean_cond</span><span class="p">[:,</span> <span class="n">sorted_indices</span><span class="p">]</span>
17131618
<span class="n">cov_cond</span> <span class="o">=</span> <span class="n">cov_cond</span><span class="p">[</span><span class="n">sorted_indices</span><span class="p">][:,</span> <span class="n">sorted_indices</span><span class="p">]</span>
17141619

1715-
<span class="n">samples_missing</span> <span class="o">=</span> <span class="n">rng</span><span class="o">.</span><span class="n">multivariate_normal</span><span class="p">(</span><span class="n">mean</span><span class="o">=</span><span class="n">mean_cond</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">cov</span><span class="o">=</span><span class="n">cov_cond</span><span class="p">,</span> <span class="n">size</span><span class="o">=</span><span class="n">n_samples</span><span class="p">)</span>
1620+
<span class="n">samples_missing</span> <span class="o">=</span> <span class="n">rng</span><span class="o">.</span><span class="n">multivariate_normal</span><span class="p">(</span>
1621+
<span class="n">mean</span><span class="o">=</span><span class="n">mean_cond</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">cov</span><span class="o">=</span><span class="n">cov_cond</span><span class="p">,</span> <span class="n">size</span><span class="o">=</span><span class="n">n_samples</span><span class="p">,</span> <span class="n">method</span><span class="o">=</span><span class="s2">"cholesky"</span>
1622+
<span class="p">)</span>
17161623
<span class="n">df_missing</span> <span class="o">=</span> <span class="n">pd</span><span class="o">.</span><span class="n">DataFrame</span><span class="p">(</span><span class="n">samples_missing</span><span class="p">,</span> <span class="n">columns</span><span class="o">=</span><span class="n">missing_vars</span><span class="p">)</span>
17171624

17181625
<span class="n">df</span> <span class="o">=</span> <span class="n">pd</span><span class="o">.</span><span class="n">DataFrame</span><span class="p">(</span><span class="n">index</span><span class="o">=</span><span class="nb">range</span><span class="p">(</span><span class="n">n_samples</span><span class="p">),</span> <span class="n">columns</span><span class="o">=</span><span class="n">variables</span><span class="p">)</span>
@@ -1881,11 +1788,11 @@ <h1>Source code for pgmpy.models.LinearGaussianBayesianNetwork</h1><div class="h
18811788
<span class="sd"> &gt;&gt;&gt; df = df.drop(columns=["folK"])</span>
18821789
<span class="sd"> &gt;&gt;&gt; model.predict(df) # doctest: +NORMALIZE_WHITESPACE</span>
18831790
<span class="sd"> folK</span>
1884-
<span class="sd"> 0 0.903384</span>
1885-
<span class="sd"> 1 0.576122</span>
1886-
<span class="sd"> 2 1.331394</span>
1887-
<span class="sd"> 3 0.027018</span>
1888-
<span class="sd"> 4 1.731904</span>
1791+
<span class="sd"> 0 1.198400</span>
1792+
<span class="sd"> 1 1.778992</span>
1793+
<span class="sd"> 2 1.605741</span>
1794+
<span class="sd"> 3 1.312239</span>
1795+
<span class="sd"> 4 1.885455</span>
18891796
<span class="sd"> """</span>
18901797
<span class="c1"># Step 0: Check the inputs</span>
18911798
<span class="n">missing_vars</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="nb">set</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">nodes</span><span class="p">())</span> <span class="o">-</span> <span class="nb">set</span><span class="p">(</span><span class="n">data</span><span class="o">.</span><span class="n">columns</span><span class="p">))</span>
@@ -1944,11 +1851,11 @@ <h1>Source code for pgmpy.models.LinearGaussianBayesianNetwork</h1><div class="h
19441851
<span class="sd"> &gt;&gt;&gt; df = df.drop(columns=["folK"])</span>
19451852
<span class="sd"> &gt;&gt;&gt; model.predict(df) # doctest: +NORMALIZE_WHITESPACE</span>
19461853
<span class="sd"> folK</span>
1947-
<span class="sd"> 0 0.903384</span>
1948-
<span class="sd"> 1 0.576122</span>
1949-
<span class="sd"> 2 1.331394</span>
1950-
<span class="sd"> 3 0.027018</span>
1951-
<span class="sd"> 4 1.731904</span>
1854+
<span class="sd"> 0 1.198400</span>
1855+
<span class="sd"> 1 1.778992</span>
1856+
<span class="sd"> 2 1.605741</span>
1857+
<span class="sd"> 3 1.312239</span>
1858+
<span class="sd"> 4 1.885455</span>
19521859
<span class="sd"> """</span>
19531860
<span class="n">missing_vars</span><span class="p">,</span> <span class="n">mu_cond</span><span class="p">,</span> <span class="n">_</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">predict_probability</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
19541861
<span class="k">return</span> <span class="n">pd</span><span class="o">.</span><span class="n">DataFrame</span><span class="p">(</span><span class="n">mu_cond</span><span class="p">,</span> <span class="n">columns</span><span class="o">=</span><span class="n">missing_vars</span><span class="p">,</span> <span class="n">index</span><span class="o">=</span><span class="n">data</span><span class="o">.</span><span class="n">index</span><span class="p">)</span></div>

‎dev/_modules/pgmpy/prediction/DoubleMLRegressor.html‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -988,7 +988,7 @@ <h1>Source code for pgmpy.prediction.DoubleMLRegressor</h1><div class="highlight
988988
<span class="sd"> &gt;&gt;&gt; lgbn = DAG.from_dagitty(</span>
989989
<span class="sd"> ... "dag { X -&gt; T [beta=0.2] X -&gt; Y [beta=0.3] T -&gt; Y [beta=0.4] }"</span>
990990
<span class="sd"> ... )</span>
991-
<span class="sd"> &gt;&gt;&gt; data = lgbn.simulate(n_samples=1000, seed=42)</span>
991+
<span class="sd"> &gt;&gt;&gt; data = lgbn.simulate(n_samples=10000, seed=42)</span>
992992
<span class="sd"> &gt;&gt;&gt; X = data.loc[:, ["X", "T"]]</span>
993993
<span class="sd"> &gt;&gt;&gt; y = data["Y"]</span>
994994

@@ -1015,7 +1015,7 @@ <h1>Source code for pgmpy.prediction.DoubleMLRegressor</h1><div class="highlight
10151015
<span class="sd"> &gt;&gt;&gt; dml.n_folds_</span>
10161016
<span class="sd"> 3</span>
10171017
<span class="sd"> &gt;&gt;&gt; dml.n_samples_</span>
1018-
<span class="sd"> 1000</span>
1018+
<span class="sd"> 10000</span>
10191019

10201020
<span class="sd"> Notes</span>
10211021
<span class="sd"> -----</span>

‎dev/api/generated/causal_inference/pgmpy.prediction.DoubleMLRegressor.DoubleMLRegressor.html‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1030,7 +1030,7 @@ <h1>DoubleMLRegressor<a class="headerlink" href="#doublemlregressor" title="Link
10301030
<span class="gp">&gt;&gt;&gt; </span><span class="n">lgbn</span> <span class="o">=</span> <span class="n">DAG</span><span class="o">.</span><span class="n">from_dagitty</span><span class="p">(</span>
10311031
<span class="gp">... </span> <span class="s2">"dag { X -&gt; T [beta=0.2] X -&gt; Y [beta=0.3] T -&gt; Y [beta=0.4] }"</span>
10321032
<span class="gp">... </span><span class="p">)</span>
1033-
<span class="gp">&gt;&gt;&gt; </span><span class="n">data</span> <span class="o">=</span> <span class="n">lgbn</span><span class="o">.</span><span class="n">simulate</span><span class="p">(</span><span class="n">n_samples</span><span class="o">=</span><span class="mi">1000</span><span class="p">,</span> <span class="n">seed</span><span class="o">=</span><span class="mi">42</span><span class="p">)</span>
1033+
<span class="gp">&gt;&gt;&gt; </span><span class="n">data</span> <span class="o">=</span> <span class="n">lgbn</span><span class="o">.</span><span class="n">simulate</span><span class="p">(</span><span class="n">n_samples</span><span class="o">=</span><span class="mi">10000</span><span class="p">,</span> <span class="n">seed</span><span class="o">=</span><span class="mi">42</span><span class="p">)</span>
10341034
<span class="gp">&gt;&gt;&gt; </span><span class="n">X</span> <span class="o">=</span> <span class="n">data</span><span class="o">.</span><span class="n">loc</span><span class="p">[:,</span> <span class="p">[</span><span class="s2">"X"</span><span class="p">,</span> <span class="s2">"T"</span><span class="p">]]</span>
10351035
<span class="gp">&gt;&gt;&gt; </span><span class="n">y</span> <span class="o">=</span> <span class="n">data</span><span class="p">[</span><span class="s2">"Y"</span><span class="p">]</span>
10361036
</pre></div>
@@ -1060,7 +1060,7 @@ <h1>DoubleMLRegressor<a class="headerlink" href="#doublemlregressor" title="Link
10601060
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">dml</span><span class="o">.</span><span class="n">n_folds_</span>
10611061
<span class="go">3</span>
10621062
<span class="gp">&gt;&gt;&gt; </span><span class="n">dml</span><span class="o">.</span><span class="n">n_samples_</span>
1063-
<span class="go">1000</span>
1063+
<span class="go">10000</span>
10641064
</pre></div>
10651065
</div>
10661066
<dl class="py method">

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