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Add new samtools checksum command
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pysam/samtools.py

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -8,6 +8,7 @@
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bedcov = pysam.utils.PysamDispatcher('samtools', 'bedcov')
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calmd = pysam.utils.PysamDispatcher('samtools', 'calmd')
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cat = pysam.utils.PysamDispatcher('samtools', 'cat')
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checksum = pysam.utils.PysamDispatcher('samtools', 'checksum')
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collate = pysam.utils.PysamDispatcher('samtools', 'collate')
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consensus = pysam.utils.PysamDispatcher('samtools', 'consensus')
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coverage = pysam.utils.PysamDispatcher('samtools', 'coverage')
@@ -47,7 +48,7 @@
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__all__ = [
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'addreplacerg', 'ampliconclip', 'ampliconstats',
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'bam2fq', 'bamshuf', 'bedcov', 'calmd', 'cat',
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'bam2fq', 'bamshuf', 'bedcov', 'calmd', 'cat', 'checksum',
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'collate', 'consensus', 'coverage', 'cram_size',
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'depad', 'depth', 'dict', 'faidx', 'fasta',
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'fastq', 'fixmate', 'flags', 'flagstat', 'fqidx',

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