PatientLevelPrediction/NAMESPACE at master · rossdwilliams/PatientLevelPrediction · GitHub

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# Generated by roxygen2: do not edit by hand

S3method(print,plpData)
S3method(print,summary.plpData)
S3method(summary,plpData)
S3method(summary,plpModel)
export(accuracy)
export(applyModel)
export(averagePrecision)
export(brierScore)
export(bySumFf)
export(calibrationLine)
export(checkPlpInstallation)
export(computeAuc)
export(computeAucFromDataFrames)
export(createExistingModelSql)
export(createLrSql)
export(createPlpJournalDocument)
export(createPlpReport)
export(createStudyPopulation)
export(diagnosticOddsRatio)
export(drawAttritionDiagramPlp)
export(evaluateExistingModel)
export(evaluatePlp)
export(exportPlpDataToCsv)
export(externalValidatePlp)
export(f1Score)
export(falseDiscoveryRate)
export(falseNegativeRate)
export(falseOmissionRate)
export(falsePositiveRate)
export(fitGLMModel)
export(fitPlp)
export(getAttritionTable)
export(getCalibration)
export(getCovariateData)
export(getModelDetails)
export(getPlpData)
export(getPlpTable)
export(getPredictionDistribution)
export(getThresholdSummary)
export(grepCovariateNames)
export(insertDbPopulation)
export(interpretInstallCode)
export(loadPlpData)
export(loadPlpModel)
export(loadPlpResult)
export(loadPrediction)
export(negativeLikelihoodRatio)
export(negativePredictiveValue)
export(personSplitter)
export(plotDemographicSummary)
export(plotF1Measure)
export(plotGeneralizability)
export(plotPlp)
export(plotPrecisionRecall)
export(plotPredictedPDF)
export(plotPredictionDistribution)
export(plotPreferencePDF)
export(plotRoc)
export(plotSparseCalibration)
export(plotSparseCalibration2)
export(plotSparseRoc)
export(plotVariableScatterplot)
export(positiveLikelihoodRatio)
export(positivePredictiveValue)
export(predictFfdf)
export(predictPlp)
export(predictProbabilities)
export(runPlp)
export(savePlpData)
export(savePlpModel)
export(savePlpResult)
export(savePrediction)
export(sensitivity)
export(setAdaBoost)
export(setCIReNN)
export(setCovNN)
export(setDecisionTree)
export(setDeepNN)
export(setGradientBoostingMachine)
export(setKNN)
export(setLassoLogisticRegression)
export(setMLP)
export(setNaiveBayes)
export(setRandomForest)
export(similarPlpData)
export(simulatePlpData)
export(specificity)
export(timeSplitter)
export(toPlpData)
export(toSparseM)
export(toSparsePython)
export(transportModel)
export(transportPlp)
export(viewPlp)
import(Cyclops)
import(DatabaseConnector)
import(FeatureExtraction)
import(bit)
import(plotly)
importFrom(Rcpp,evalCpp)
importFrom(SqlRender,loadRenderTranslateSql)
importFrom(SqlRender,translateSql)
importFrom(grDevices,dev.control)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,recordPlot)
importFrom(grDevices,rgb)
importFrom(magrittr,"%>%")
importFrom(methods,is)
importFrom(plyr,ddply)
importFrom(stats,aggregate)
importFrom(stats,binom.test)
importFrom(stats,lm)
importFrom(stats,printCoefmat)
importFrom(stats,rpois)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(utils,data)
importFrom(utils,write.csv)
importFrom(utils,write.table)
useDynLib(PatientLevelPrediction)