There was an error while loading. Please reload this page.
1 parent a7640ee commit c3037afCopy full SHA for c3037af
1 file changed
setup_creators/environment.yaml
@@ -2,21 +2,12 @@ channels:
2
- conda-forge
3
- bioconda
4
dependencies:
5
- - snakemake-minimal >=8.4.4
6
- - snakemake-executor-plugin-slurm
7
- - snakemake-storage-plugin-fs
8
- - black
9
- - snakefmt
+ - snakemake-minimal >=9.7.1
10
- jinja2
11
- matplotlib
12
- graphviz
13
- bcftools >=1.19
14
- - samtools =1.19.2
15
- - bwa =0.7.17
16
- - pip:
17
- - pysam
18
- # at the time of writing - 7. Feb 24 - pysam will require
19
- # a lower python version than snakemake, install pysam
20
- # using pip
+ - samtools >=1.19
+ - bwa ~=0.7.17
21
- pygments
22
- - seaborn
+ - pysam =0.22
0 commit comments