ala-docker/swarm-docker-compose.yml at master · steinho/ala-docker · GitHub

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version: '3.7'

networks:
  basnet:
    external: true

secrets:
  biodiversitydata.se.crt:
    file: ./nginx-proxy-certs/biodiversitydata.se.crt
  biodiversitydata.se.key:
    file: ./nginx-proxy-certs/biodiversitydata.se.key
  htpasswd:
    file: ./env/.htpasswd

configs:
  config_nginx-proxy:
    file: ./webserver/nginx-proxy.conf
  config_ala-cors:
    file: ./webserver/ala-cors.conf
  config_biocache:
    file: ./config/biocache-config.properties
  config_logger-client:
    file: ./config/logger-client.properties
  config_ala_hub:
    file: ./config/ala-hub-config.properties
  config_blacklist:
    file: ./config/blacklistMediaUrls.txt

services:

  proxy:
    image: jwilder/nginx-proxy:1.3.0
    init: true
    ports:
      - target: 80
        published: 80
        mode: host
      - target: 443
        published: 443
        mode: host
    volumes:
      - /var/run/docker.sock:/tmp/docker.sock
      - ./webserver/conf.d:/etc/nginx/conf.d
    secrets:
      - source: biodiversitydata.se.crt
        target: /etc/nginx/certs/biodiversitydata.se.crt
      - source: biodiversitydata.se.key
        target: /etc/nginx/certs/biodiversitydata.se.key
    configs:
      - source: config_nginx-proxy
        target: /etc/nginx/proxy.conf
      - source: config_ala-cors
        target: /etc/nginx/ala-cors.conf
    logging:
      driver: local
      options:
        max-size: 100m
        max-file: 5
    deploy:
      placement:
        constraints:
          - node.role == manager
    networks:
      - basnet

  biocacheservice:
    image: bioatlas/ala-biocacheservice:v2.5.1
    depends_on:
      - cassandradb
      - solr
    environment:
      JAVA_OPTS: -Xmx8g -Xms128m -Xss256k -Djava.awt.headless=true -Djava.security.egd=file:/dev/./urandom -Dlog4j2.formatMsgNoLookups=true
    volumes:
      - data_nameindex_old:/data/lucene/namematching
    env_file: ./env/.envbiocacheservice
    configs:
      - source: config_biocache
        target: /data/biocache/config/biocache-config.properties
      - source: config_logger-client
        target: /data/logger-client/config/logger-client.properties
    networks:
      - basnet
    deploy:
      placement:
        constraints:
          - node.hostname == live-manager-1
    command: /bin/sh -c "rm /usr/local/tomcat/conf/Catalina/localhost/ROOT.xml && envsubst < /tmp/context.xml > /usr/local/tomcat/conf/Catalina/localhost/ws.xml && catalina.sh run"

  biocachehub:
    image: bioatlas/ala-biocachehub:v3.2.9-BAS
    depends_on:
      - biocacheservice
    env_file: ./env/.envbiocachehub
    environment:
      JAVA_OPTS: -Xmx4g -Xms128m -Xss256k -Djava.awt.headless=true -Djava.security.egd=file:/dev/./urandom -Dlog4j2.formatMsgNoLookups=true
    configs:
      - source: config_ala_hub
        target: /data/ala-hub/config/ala-hub-config.properties
    networks:
      - basnet

  nameindex:
    image: bioatlas/ala-nameindex:v3.5
    #image: bioatlas/ala-dyntaxaindex:v0.4
    command: /bin/ash
    volumes:
      - data_nameindex_old:/data/lucene/namematching
    networks:
      - basnet
    deploy:
      restart_policy:
        condition: none

  biocachebackend:
    image: bioatlas/ala-biocachebackend:v2.6.0
    command: /bin/ash
    environment:
      - BIOCACHE_MEMORY_OPTS=-Xmx16g -Xms1g -Xss1024k
    volumes:
      - data_nameindex_old:/data/lucene/namematching
      - data_biocachebackend:/data
    configs:
      - source: config_blacklist
        target: /data/biocache/config/blacklistMediaUrls.txt
      - source: config_biocache
        target: /data/biocache/config/biocache-config.properties
    networks:
      - basnet
    deploy:
      restart_policy:
        condition: none
      placement:
        constraints:
          - node.hostname == live-manager-1

volumes:
  data_nameindex_old:
    driver: local
    driver_opts:
      type: nfs
      o: nfsvers=4,addr=live-manager-1,rw
      device: ":/docker_nfs/var/volumes/data_nameindex_old"
  data_biocachebackend:
    driver: local
    driver_opts:
      type: nfs
      o: nfsvers=4,addr=live-manager-1,rw
      device: ":/docker_nfs/var/volumes/data_biocachebackend"