Distributed behavioral experiments
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Updated
Feb 19, 2025 - Python
Distributed behavioral experiments
A device for measuring licking behaviour in rodents in real time
GUI tool for computing 50% withdrawal thresholds from von Frey up-down data with publication-ready figures and statistical analysis
an ml model to classify behavior in East African cichlid fish
Review of mathematical neuroscience topics for the UMN Neurosci prelim
Unity package consuming OpenApparatus.Core to generate procedural navigation environments in Unity scenes.
Engine-agnostic .NET library for procedurally generating reproducible navigation environments — multi-room floor plans, mazes, and behavioral-research apparatuses.
Streamlit tool to explore individual mouse behavior—occupancy, zone/pen transitions, circadian activity, food use, and cross-pen roaming—from RFID colony data.
Object-oriented, extensible behavioral testing framework for Odor Discrimination and multi-modal experiments. Features real-time Teensy/MATLAB integration and automated data logging.
A no-code Windows GUI application for recording timestamped MP4 videos from Basler USB3 cameras using the pylon SDK. Built for behavioral neuroscience recordings (such as LUPE (PMID: 41501467)), with live preview, adjustable camera settings, and automatic JSON metadata output.
Arduino firmware for Drosophila peak-end-rule electroshock-conditioning experiments. PARROTard protocol; Python host via cuewire.
Cross-platform desktop app (Avalonia) for authoring and previewing OpenApparatus floor plans.
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