# Summary - Tool: convex_dispersion - Link to external repository containing the wrapper XML: https://unh-pfem-gitlab.ara.inrae.fr/marie.lefebvre/code_indicateur_galaxy/ # Steps ## Setup - [x] Copy the code from the other repository into a sub-folder under tools/ - [ ] Check `planemo lint .` and `planemo test .` ## Make `planemo lint .` and `planemo test .` pass - [x] Check and/or update dependencies - [x] Update the Galaxy profile version - [ ] Update the tool wrapper to recent standards - [x] Add citations -> default should be latest W4M publication - [x] Update tool wrapper version ## Improvements This is an [example](https://github.com/workflow4metabolomics/tools-metabolomics/blob/master/tools/xcms/xcms_plot_raw.xml) of a recent tool wrapper that complies with recent best practices. - [x] Make the tool work with Pulsar (see [including required files](https://docs.galaxyproject.org/en/latest/dev/schema.html#tool-required-files-include) - [x] Add [EDAM](https://edamontology.github.io/edam-browser/#topic_0091) topics and operations (see [here](https://docs.galaxyproject.org/en/latest/dev/schema.html#tool-edam-topics)) - [x] Add creator tag (see [here](https://docs.galaxyproject.org/en/latest/dev/schema.html#tool-creator)) ``` <organization url="https://workflow4metabolomics.org/" email="workflow4metabolomics@proton.me" name="Workflow4Metabolomics" /> ``` - [ ] Update help text and parameter documentation - [ ] Code seems unfunctionnal: fix it - [ ] Tests expected output files missing: add it ## Cleanup - [ ] Archive the other repository and update the README.md file there
Summary
Steps
Setup
planemo lint .andplanemo test .Make
planemo lint .andplanemo test .passImprovements
This is an example of a recent tool wrapper that complies with recent best practices.
Cleanup