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EGA-archive

European Genome-Phenome Archive

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https://ega-archive.org
channel/UC4Pzhn0c5YBVlFo2qGko_4Q
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@egaarchive

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ega-quickview ega-quickview Public

FUSE file system to access EGA files securely and remotely

C 5
crypt4gh crypt4gh Public

GA4GH cryptographic tools

Python 19 15
ega-download-client ega-download-client Public

A Python-based EGA download client

Python 108 52
beacon2-pi-api beacon2-pi-api Public

Beacon v2 Production Implementation (API)

Python 9 11

Repositories

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All C Dockerfile HTML Java JavaScript Nextflow Perl PLpgSQL Python R Rust Shell TypeScript

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Showing 10 of 69 repositories

beacon2-pi-api Public
Beacon v2 Production Implementation (API)

EGA-archive/beacon2-pi-api’s past year of commit activity

Python 9 Apache-2.0 11 0 0 Updated Nov 24, 2025
EUCAIM-Schema Public
Schema for EUCAIM beacon

EGA-archive/EUCAIM-Schema’s past year of commit activity

0 0 0 0 Updated Nov 24, 2025
beacon-template-ui Public

EGA-archive/beacon-template-ui’s past year of commit activity

JavaScript 2 Apache-2.0 5 0 0 Updated Nov 20, 2025
LocalEGA Public
A federated storage for sensitive data

EGA-archive/LocalEGA’s past year of commit activity

Python 8 Apache-2.0 16 0 0 Updated Nov 18, 2025
beacon2-ri-tools-v2 Public

EGA-archive/beacon2-ri-tools-v2’s past year of commit activity

Python 4 Apache-2.0 10 4 0 Updated Nov 17, 2025
ega-fuse-client Public
A Java/JNR based FUSE virtual file system client to provide access to authorized EGA files via the EGA Data REST API (v3)

EGA-archive/ega-fuse-client’s past year of commit activity

Java 6 Apache-2.0 7 0 2 Updated Nov 13, 2025
AF_bcftools_pipeline Public
Pipeline to run QC and calculate AFs stratified by sex and ancestry using bcftools

EGA-archive/AF_bcftools_pipeline’s past year of commit activity

Nextflow 0 0 0 0 Updated Nov 13, 2025
allele-frequency-browser Public

EGA-archive/allele-frequency-browser’s past year of commit activity

JavaScript 0 Apache-2.0 0 0 0 Updated Nov 13, 2025
integrity-checker Public

EGA-archive/integrity-checker’s past year of commit activity

Shell 0 0 0 0 Updated Nov 11, 2025
QC Public

EGA-archive/QC’s past year of commit activity

JavaScript 0 Apache-2.0 0 0 0 Updated Oct 30, 2025

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