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Update brian, nrn, nest, pynn #148

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b998dac
Update brian, nrn, nest, pynn
pgleeson Jun 13, 2025
c748e36
Back to pynn 0.11.0 for now...
pgleeson Jun 16, 2025
a2b5823
To v0.3.11
pgleeson Aug 4, 2025
9f4abed
Merge branch 'development' into test_pynn012
pgleeson Aug 4, 2025
6717c83
Merge pull request #141 from OpenSourceBrain/test_pynn012
pgleeson Aug 5, 2025
17cd6ca
Fix YAML syntax for Python version exclusion
pgleeson Sep 15, 2025
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2 changes: 1 addition & 1 deletion .github/workflows/ci_versions.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@ jobs:
runs-on: [ubuntu-latest, macos-latest ]
exclude:
- runs-on: macos-latest
python-version: ["3.9"]
python-version: "3.9"

steps:
- uses: actions/checkout@v4
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2 changes: 1 addition & 1 deletion omv/engines/getbrian2.py
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Expand Up @@ -5,7 +5,7 @@

def install_brian2(version):
if not version:
version = "2.7.1"
version = "2.9.0"
try:
pip_install("brian2", version)
import brian2
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2 changes: 1 addition & 1 deletion omv/engines/getnest.py
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Expand Up @@ -8,7 +8,7 @@

def install_nest(version):
if not version:
version = "3.5"
version = "3.7"

inform("Installing NEST", indent=2, verbosity=1)
nestpath = os.path.join(os.environ["HOME"], "nest")
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2 changes: 1 addition & 1 deletion omv/engines/getnrn.py
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Expand Up @@ -10,7 +10,7 @@
def install_neuron(version):
if not version:
if sys.version_info.major == 3:
version = "8.2.7" # for pynn 0.11.0
version = "8.2.7"
else:
version = "7.6"

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2 changes: 1 addition & 1 deletion setup.cfg
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@@ -1,6 +1,6 @@
[metadata]
name = OSBModelValidation
version = 0.3.10
version = 0.3.11
author = Boris Marin, Padraig Gleeson
author_email = [email protected]
url = https://github.com/OpenSourceBrain/osb-model-validation
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2 changes: 1 addition & 1 deletion utilities/tests/.test.exIzh.jnml.omt
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Expand Up @@ -13,4 +13,4 @@ experiments:
scaling: [1000, 1000]
spike detection:
method: threshold
tolerance: 0.000051
tolerance: 5.0862371508887715e-05
2 changes: 1 addition & 1 deletion utilities/tests/.test.exIzh.jnmleden.omt
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Original file line number Diff line number Diff line change
Expand Up @@ -13,4 +13,4 @@ experiments:
scaling: [1000, 1000]
spike detection:
method: threshold
tolerance: 0.00014888369126089628
tolerance: 0.00014884116521364865
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